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The map label for this gene is ctpA [H]

Identifier: 91786787

GI number: 91786787

Start: 906058

End: 907497

Strand: Reverse

Name: ctpA [H]

Synonym: Bpro_0885

Alternate gene names: 91786787

Gene position: 907497-906058 (Counterclockwise)

Preceding gene: 91786788

Following gene: 91786786

Centisome position: 17.45

GC content: 61.46

Gene sequence:

>1440_bases
ATGGGTCAGAAGCTCAAGATAGCAGGCTGGATTTCGATCGGTGCCGTGGCAGGTGCCCTCACCACAGTGCAACTCCAGGC
CGTCGCGCGCGGCGGCCTGACCCCCTTGCCGCTCGAAGAGTTGCAGCAACTGGCCGCCGTTTTTGGCATGGTCAAGACCG
ACTACGTCGAACCGGTTGACGAAAAGAAACTCATTACGGACGCCATTTCGGGCATGGTGGCAAGCCTGGATCCGCATTCC
GTCTATTTCGACAAAAAATCGTACAAGGAGTTTCGCGAGGGTACCTCCGGACGGTTTGTGGGTGTCGGCATCGAGATCAG
CCAGGAAGACGGCCTGGTCAAGGTGGTTTCCCCGATAGAAGGCTCACCCGCCGATCGCGCGGGCCTCAAACCCAATGACC
TGATCACCCGGATCGACGACACGGCCGTCAAGGGCCTGTCCCTCAACGACGCGGTGAAGAAAATGCGTGGCGAGCCCAAA
ACCAAGGTGCTGCTGACGATCTTCCGCAAGGACGAAAACCGCACATTTCCCGTCACCATCACGCGCGAGGAAATTCGTAC
CCAGTCTGTGCGCAGCAAGGTCGTCGAGCCCGGTTACGCCTGGATCCGGCTGAGCCAGTTCCAGGAGCGCACGGTGGAAG
ATTTTGTCACCAAGCTGGAACAGATCTACAAGCAGGAGCCCAACCTCAAGGGCCTGGTGCTGGACCTGCGCAACGACCCC
GGCGGCTTGCTGGATGCGGCCGTTGCGGTGTCAGCCGCCTTCCTGCCGGAGAACGTCACGGTGGTCTCCACCAACGGCCA
GCTGGCAGAAAGCAAATTCACCTACAAGGCGTCCCCGGAGTTTTACCAGCGCCGCAACGGAGCTGATCCCCTGAAGCGCC
TGCCCGCGGCCATCAAGAAGGTGCCGCTGGTGGTGCTCGTCAATGAAGGCTCAGCCTCCGCCAGCGAGATCGTGGCAGGT
GCCCTTCAGGACTACAAACGCGCCACCATCATGGGCAACCAGACTTTCGGCAAAGGCTCGGTCCAGACCGTGCGCCCGCT
GGGCCCTGATACCGGCATCAAGCTCACCACGGCCCGTTACTACACCCCCAGCGGCAAATCCATCCAGGCGCGCGGCATCG
TTCCCGACGTGATGGTGGACGACACCGCCGAAGGCAGCCCGTTTGCCGCATTGCGCACGCGCGAAGCCGATCTGGAAAAG
CATCTCAACAGCGGCCAGGGCTCTGAAGTCAAGGATGCCAGCCGGGAAAAAGCCCGCGAGGAAGCCTTGAAGCGCCTGGA
AGAAGAGGCCAAAAAGACGCCGGAGCAGCGCCGCCCGCCCGAACTGGGCAGCGACAAGGACTTCCAGCTGGCGCAGGCCA
TCAACCAGCTCAAGGGCCGGCCGGTGCTGGTCAGCAAGACGGCGGTGGTCGAGCCCAAAAACGAGAAAAAAGAAAACTAG

Upstream 100 bases:

>100_bases
GCCCGACAATGGAACTGCGGCGCCGGGTCTTTCTCCAAGGTGTATATTGTTCCAGTGATAGGGGAACAAGGGTTCTCCAA
CAGGTTTACGAAGGTGATTT

Downstream 100 bases:

>100_bases
GCCAGTCTGTAGGCCGGTAACGATCAGGTCGTCGGCTCCCGTCCACCTGATCGGATCCACCCGTGCGCTGCCCCTGCGCC
GACGCGGGTACGTACCGGCT

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 479; Mature: 478

Protein sequence:

>479_residues
MGQKLKIAGWISIGAVAGALTTVQLQAVARGGLTPLPLEELQQLAAVFGMVKTDYVEPVDEKKLITDAISGMVASLDPHS
VYFDKKSYKEFREGTSGRFVGVGIEISQEDGLVKVVSPIEGSPADRAGLKPNDLITRIDDTAVKGLSLNDAVKKMRGEPK
TKVLLTIFRKDENRTFPVTITREEIRTQSVRSKVVEPGYAWIRLSQFQERTVEDFVTKLEQIYKQEPNLKGLVLDLRNDP
GGLLDAAVAVSAAFLPENVTVVSTNGQLAESKFTYKASPEFYQRRNGADPLKRLPAAIKKVPLVVLVNEGSASASEIVAG
ALQDYKRATIMGNQTFGKGSVQTVRPLGPDTGIKLTTARYYTPSGKSIQARGIVPDVMVDDTAEGSPFAALRTREADLEK
HLNSGQGSEVKDASREKAREEALKRLEEEAKKTPEQRRPPELGSDKDFQLAQAINQLKGRPVLVSKTAVVEPKNEKKEN

Sequences:

>Translated_479_residues
MGQKLKIAGWISIGAVAGALTTVQLQAVARGGLTPLPLEELQQLAAVFGMVKTDYVEPVDEKKLITDAISGMVASLDPHS
VYFDKKSYKEFREGTSGRFVGVGIEISQEDGLVKVVSPIEGSPADRAGLKPNDLITRIDDTAVKGLSLNDAVKKMRGEPK
TKVLLTIFRKDENRTFPVTITREEIRTQSVRSKVVEPGYAWIRLSQFQERTVEDFVTKLEQIYKQEPNLKGLVLDLRNDP
GGLLDAAVAVSAAFLPENVTVVSTNGQLAESKFTYKASPEFYQRRNGADPLKRLPAAIKKVPLVVLVNEGSASASEIVAG
ALQDYKRATIMGNQTFGKGSVQTVRPLGPDTGIKLTTARYYTPSGKSIQARGIVPDVMVDDTAEGSPFAALRTREADLEK
HLNSGQGSEVKDASREKAREEALKRLEEEAKKTPEQRRPPELGSDKDFQLAQAINQLKGRPVLVSKTAVVEPKNEKKEN
>Mature_478_residues
GQKLKIAGWISIGAVAGALTTVQLQAVARGGLTPLPLEELQQLAAVFGMVKTDYVEPVDEKKLITDAISGMVASLDPHSV
YFDKKSYKEFREGTSGRFVGVGIEISQEDGLVKVVSPIEGSPADRAGLKPNDLITRIDDTAVKGLSLNDAVKKMRGEPKT
KVLLTIFRKDENRTFPVTITREEIRTQSVRSKVVEPGYAWIRLSQFQERTVEDFVTKLEQIYKQEPNLKGLVLDLRNDPG
GLLDAAVAVSAAFLPENVTVVSTNGQLAESKFTYKASPEFYQRRNGADPLKRLPAAIKKVPLVVLVNEGSASASEIVAGA
LQDYKRATIMGNQTFGKGSVQTVRPLGPDTGIKLTTARYYTPSGKSIQARGIVPDVMVDDTAEGSPFAALRTREADLEKH
LNSGQGSEVKDASREKAREEALKRLEEEAKKTPEQRRPPELGSDKDFQLAQAINQLKGRPVLVSKTAVVEPKNEKKEN

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=370, Percent_Identity=30.2702702702703, Blast_Score=126, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 52309; Mature: 52178

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQKLKIAGWISIGAVAGALTTVQLQAVARGGLTPLPLEELQQLAAVFGMVKTDYVEPVD
CCCCEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
EKKLITDAISGMVASLDPHSVYFDKKSYKEFREGTSGRFVGVGIEISQEDGLVKVVSPIE
HHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEECCCC
GSPADRAGLKPNDLITRIDDTAVKGLSLNDAVKKMRGEPKTKVLLTIFRKDENRTFPVTI
CCCCCCCCCCHHHHHHHCCHHHHCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEEE
TREEIRTQSVRSKVVEPGYAWIRLSQFQERTVEDFVTKLEQIYKQEPNLKGLVLDLRNDP
EHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
GGLLDAAVAVSAAFLPENVTVVSTNGQLAESKFTYKASPEFYQRRNGADPLKRLPAAIKK
CHHHHHHHHHHHHHCCCCEEEEECCCCEECCCEEECCCHHHHHHCCCCCHHHHHHHHHHH
VPLVVLVNEGSASASEIVAGALQDYKRATIMGNQTFGKGSVQTVRPLGPDTGIKLTTARY
CCEEEEECCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCEECCCCCCCCEEEEEEEE
YTPSGKSIQARGIVPDVMVDDTAEGSPFAALRTREADLEKHLNSGQGSEVKDASREKARE
ECCCCCCEEECCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
EALKRLEEEAKKTPEQRRPPELGSDKDFQLAQAINQLKGRPVLVSKTAVVEPKNEKKEN
HHHHHHHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCEEECCCCCCCCC
>Mature Secondary Structure 
GQKLKIAGWISIGAVAGALTTVQLQAVARGGLTPLPLEELQQLAAVFGMVKTDYVEPVD
CCCEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
EKKLITDAISGMVASLDPHSVYFDKKSYKEFREGTSGRFVGVGIEISQEDGLVKVVSPIE
HHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEECCCC
GSPADRAGLKPNDLITRIDDTAVKGLSLNDAVKKMRGEPKTKVLLTIFRKDENRTFPVTI
CCCCCCCCCCHHHHHHHCCHHHHCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEEE
TREEIRTQSVRSKVVEPGYAWIRLSQFQERTVEDFVTKLEQIYKQEPNLKGLVLDLRNDP
EHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
GGLLDAAVAVSAAFLPENVTVVSTNGQLAESKFTYKASPEFYQRRNGADPLKRLPAAIKK
CHHHHHHHHHHHHHCCCCEEEEECCCCEECCCEEECCCHHHHHHCCCCCHHHHHHHHHHH
VPLVVLVNEGSASASEIVAGALQDYKRATIMGNQTFGKGSVQTVRPLGPDTGIKLTTARY
CCEEEEECCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCEECCCCCCCCEEEEEEEE
YTPSGKSIQARGIVPDVMVDDTAEGSPFAALRTREADLEKHLNSGQGSEVKDASREKARE
ECCCCCCEEECCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
EALKRLEEEAKKTPEQRRPPELGSDKDFQLAQAINQLKGRPVLVSKTAVVEPKNEKKEN
HHHHHHHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]