| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is gpmA [H]
Identifier: 91786788
GI number: 91786788
Start: 907697
End: 908578
Strand: Reverse
Name: gpmA [H]
Synonym: Bpro_0886
Alternate gene names: 91786788
Gene position: 908578-907697 (Counterclockwise)
Preceding gene: 91786793
Following gene: 91786787
Centisome position: 17.47
GC content: 62.7
Gene sequence:
>882_bases GTGTTTTTCACCAAACCAGTGATTTTAGAATGGAGGCCGGAAATTGCCTACCGGCTGCCTCTTTTACCCCTGCCTGCTGC ACCCTTTCTCACCCCCGTTTTCACTTCATCCCTCTCCTTCCCACCCGACTGCCACACCATGTACAAACTCGTACTCATCC GCCATGGCGAATCCACCTGGAACCTTGAAAACCGATTTACCGGCTGGACCGATGTCGACCTGACGGAAACCGGCATCCAG CAAGCCAAGGATGCCGGAAAGCTGCTCAAGGCCGAGGGTTACGACTTTGACCTGGCCTACACCAGCGTGCTCAAGCGCGC CACCCGCACCCTCTGGCATGTGCTGGACGAGATGGACCGGACCTGGCTGCCGGTCGTGAACAGCTGGCGGCTGAACGAGC GCCATTACGGCGCGCTGCAGGGCCTGAACAAGGCCGAGACAGCCAAAAAATATGGCGAAGACCAGGTACTGATCTGGCGC CGCAGCTATGACACGCCGCCCCCGCCGCTGGCGGCCAACGACGAGCGCTGCGAACGCGGCGACCCCCGCTATGCCAAGCT GCCGCCCGAGCAGGTGCCGCTGACGGAGTGCCTGAAAGACACGGTGGCGCGGGTGTTGCCCTTCTGGAATGAGTCCATGG CACCCGCCATCAAGGCCGGCAAGCGCGTGGTGGTGGCTGCCCACGGCAACTCGATACGCGCGCTGGTGAAGTACCTGGAC AACATCTCCGACAGCGACATCGTGGGACTCAACATCCCCAACGGCATTCCGCTGGTGTATGAGCTGGATGCCCAGCTCAG GCCCCTGCGCCACTACTACCTGGGCGACAGCGAAGCCGCTGCCAGGGCCGTGGCGGCCGTCAGCGCCCAGGGCAAGGCCT GA
Upstream 100 bases:
>100_bases ACACCGGAAATCATGGGCCAGATCAGCATGCCGCCCGAGGCGAGCGCTACCGAAATCAGCATCCAGTTATCGATCAGAAA TTTCACTTGCTACCCTTTGT
Downstream 100 bases:
>100_bases ACACGGCCTTTCGGACCTGATGGACCTGCTTTTTTGTAAAGGTCCTGTAAAACCCGACGGTTCCGGTACTTTTACGGCTT CCCGGCTGCGTCCTTGGGGG
Product: phosphoglycerate mutase
Products: NA
Alternate protein names: BPG-dependent PGAM; PGAM; Phosphoglyceromutase; dPGM [H]
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MFFTKPVILEWRPEIAYRLPLLPLPAAPFLTPVFTSSLSFPPDCHTMYKLVLIRHGESTWNLENRFTGWTDVDLTETGIQ QAKDAGKLLKAEGYDFDLAYTSVLKRATRTLWHVLDEMDRTWLPVVNSWRLNERHYGALQGLNKAETAKKYGEDQVLIWR RSYDTPPPPLAANDERCERGDPRYAKLPPEQVPLTECLKDTVARVLPFWNESMAPAIKAGKRVVVAAHGNSIRALVKYLD NISDSDIVGLNIPNGIPLVYELDAQLRPLRHYYLGDSEAAARAVAAVSAQGKA
Sequences:
>Translated_293_residues MFFTKPVILEWRPEIAYRLPLLPLPAAPFLTPVFTSSLSFPPDCHTMYKLVLIRHGESTWNLENRFTGWTDVDLTETGIQ QAKDAGKLLKAEGYDFDLAYTSVLKRATRTLWHVLDEMDRTWLPVVNSWRLNERHYGALQGLNKAETAKKYGEDQVLIWR RSYDTPPPPLAANDERCERGDPRYAKLPPEQVPLTECLKDTVARVLPFWNESMAPAIKAGKRVVVAAHGNSIRALVKYLD NISDSDIVGLNIPNGIPLVYELDAQLRPLRHYYLGDSEAAARAVAAVSAQGKA >Mature_293_residues MFFTKPVILEWRPEIAYRLPLLPLPAAPFLTPVFTSSLSFPPDCHTMYKLVLIRHGESTWNLENRFTGWTDVDLTETGIQ QAKDAGKLLKAEGYDFDLAYTSVLKRATRTLWHVLDEMDRTWLPVVNSWRLNERHYGALQGLNKAETAKKYGEDQVLIWR RSYDTPPPPLAANDERCERGDPRYAKLPPEQVPLTECLKDTVARVLPFWNESMAPAIKAGKRVVVAAHGNSIRALVKYLD NISDSDIVGLNIPNGIPLVYELDAQLRPLRHYYLGDSEAAARAVAAVSAQGKA
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0588
COG function: function code G; Phosphoglycerate mutase 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily [H]
Homologues:
Organism=Homo sapiens, GI50593010, Length=252, Percent_Identity=57.9365079365079, Blast_Score=306, Evalue=2e-83, Organism=Homo sapiens, GI4505753, Length=249, Percent_Identity=59.8393574297189, Blast_Score=299, Evalue=2e-81, Organism=Homo sapiens, GI71274132, Length=249, Percent_Identity=57.8313253012048, Blast_Score=287, Evalue=7e-78, Organism=Homo sapiens, GI4502445, Length=253, Percent_Identity=47.4308300395257, Blast_Score=260, Evalue=9e-70, Organism=Homo sapiens, GI40353764, Length=253, Percent_Identity=47.4308300395257, Blast_Score=260, Evalue=9e-70, Organism=Homo sapiens, GI310129614, Length=162, Percent_Identity=62.3456790123457, Blast_Score=197, Evalue=1e-50, Organism=Escherichia coli, GI1786970, Length=245, Percent_Identity=64.4897959183673, Blast_Score=335, Evalue=3e-93, Organism=Saccharomyces cerevisiae, GI6322697, Length=246, Percent_Identity=52.8455284552846, Blast_Score=248, Evalue=5e-67, Organism=Saccharomyces cerevisiae, GI6324516, Length=294, Percent_Identity=35.3741496598639, Blast_Score=154, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6320183, Length=307, Percent_Identity=31.9218241042345, Blast_Score=147, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6324857, Length=198, Percent_Identity=25.2525252525253, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI24646216, Length=250, Percent_Identity=54.8, Blast_Score=280, Evalue=6e-76, Organism=Drosophila melanogaster, GI85725270, Length=250, Percent_Identity=53.6, Blast_Score=266, Evalue=2e-71, Organism=Drosophila melanogaster, GI85725272, Length=250, Percent_Identity=53.6, Blast_Score=266, Evalue=2e-71, Organism=Drosophila melanogaster, GI24650981, Length=250, Percent_Identity=53.6, Blast_Score=266, Evalue=2e-71, Organism=Drosophila melanogaster, GI28571815, Length=251, Percent_Identity=39.8406374501992, Blast_Score=181, Evalue=5e-46, Organism=Drosophila melanogaster, GI28571817, Length=251, Percent_Identity=39.8406374501992, Blast_Score=180, Evalue=9e-46, Organism=Drosophila melanogaster, GI24648979, Length=251, Percent_Identity=39.8406374501992, Blast_Score=180, Evalue=1e-45,
Paralogues:
None
Copy number: 960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 33026; Mature: 33026
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: PS00175 PG_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFTKPVILEWRPEIAYRLPLLPLPAAPFLTPVFTSSLSFPPDCHTMYKLVLIRHGESTW CCCCCCEEEEECCCHHEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHEECCCCCC NLENRFTGWTDVDLTETGIQQAKDAGKLLKAEGYDFDLAYTSVLKRATRTLWHVLDEMDR CCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC TWLPVVNSWRLNERHYGALQGLNKAETAKKYGEDQVLIWRRSYDTPPPPLAANDERCERG CCCCCCCCEECCCHHHHHHHCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHCC DPRYAKLPPEQVPLTECLKDTVARVLPFWNESMAPAIKAGKRVVVAAHGNSIRALVKYLD CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEECCCHHHHHHHHHH NISDSDIVGLNIPNGIPLVYELDAQLRPLRHYYLGDSEAAARAVAAVSAQGKA CCCCCCEEEEECCCCCCEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MFFTKPVILEWRPEIAYRLPLLPLPAAPFLTPVFTSSLSFPPDCHTMYKLVLIRHGESTW CCCCCCEEEEECCCHHEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHEECCCCCC NLENRFTGWTDVDLTETGIQQAKDAGKLLKAEGYDFDLAYTSVLKRATRTLWHVLDEMDR CCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC TWLPVVNSWRLNERHYGALQGLNKAETAKKYGEDQVLIWRRSYDTPPPPLAANDERCERG CCCCCCCCEECCCHHHHHHHCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHCC DPRYAKLPPEQVPLTECLKDTVARVLPFWNESMAPAIKAGKRVVVAAHGNSIRALVKYLD CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEECCCHHHHHHHHHH NISDSDIVGLNIPNGIPLVYELDAQLRPLRHYYLGDSEAAARAVAAVSAQGKA CCCCCCEEEEECCCCCCEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA