| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786781
Identifier: 91786781
GI number: 91786781
Start: 899886
End: 900050
Strand: Reverse
Name: 91786781
Synonym: Bpro_0879
Alternate gene names: NA
Gene position: 900050-899886 (Counterclockwise)
Preceding gene: 91786782
Following gene: 91786780
Centisome position: 17.31
GC content: 52.73
Gene sequence:
>165_bases ATGCTGCACTATTCCGTTGTTTTTCTGGTGATCGCGCTGATCGCCGCCATCTTCGGCTTCGGTGGTATCGCGGCAGGCGC CGTTGAGATTGCCAAGATCCTCTTCTTCATCTTCGCCATCATGGCTGTGGTCAGCTTTGTGATGGGCCTGATCAAAAAGA ACTGA
Upstream 100 bases:
>100_bases CCGATGAGAAAAGACCGCCATTGTCTTTAACCTTGCTGCAGGGCGTTTCAAAGTTTCGACAACGAAACGCCGACCAACCC AGTCATGCAAGGAGATCGAG
Downstream 100 bases:
>100_bases CGCGCCCTGCGGCGGCACCGTGGCGACGCCGTCCCGGCGCCTTTCCCGGTTTCATTGCCGGGCAAGGCATGACGCGAAGC CCCCGTCACAGACCCACCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 54; Mature: 54
Protein sequence:
>54_residues MLHYSVVFLVIALIAAIFGFGGIAAGAVEIAKILFFIFAIMAVVSFVMGLIKKN
Sequences:
>Translated_54_residues MLHYSVVFLVIALIAAIFGFGGIAAGAVEIAKILFFIFAIMAVVSFVMGLIKKN >Mature_54_residues MLHYSVVFLVIALIAAIFGFGGIAAGAVEIAKILFFIFAIMAVVSFVMGLIKKN
Specific function: Unknown
COG id: COG5487
COG function: function code S; Small integral membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0391 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y879_POLSJ (Q12F57)
Other databases:
- EMBL: CP000316 - RefSeq: YP_547733.1 - STRING: Q12F57 - GeneID: 4011479 - GenomeReviews: CP000316_GR - KEGG: pol:Bpro_0879 - NMPDR: fig|296591.1.peg.3054 - eggNOG: NOG120797 - OMA: RYAVIFF - ProtClustDB: PRK13682 - BioCyc: PSP296591:BPRO_0879-MONOMER - HAMAP: MF_01361 - InterPro: IPR009760 - PIRSF: PIRSF036466
Pfam domain/function: PF07043 DUF1328
EC number: NA
Molecular weight: Translated: 5747; Mature: 5747
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x13d3be74)-; HASH(0x142f4e10)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHYSVVFLVIALIAAIFGFGGIAAGAVEIAKILFFIFAIMAVVSFVMGLIKKN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH >Mature Secondary Structure MLHYSVVFLVIALIAAIFGFGGIAAGAVEIAKILFFIFAIMAVVSFVMGLIKKN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA