Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91786781

Identifier: 91786781

GI number: 91786781

Start: 899886

End: 900050

Strand: Reverse

Name: 91786781

Synonym: Bpro_0879

Alternate gene names: NA

Gene position: 900050-899886 (Counterclockwise)

Preceding gene: 91786782

Following gene: 91786780

Centisome position: 17.31

GC content: 52.73

Gene sequence:

>165_bases
ATGCTGCACTATTCCGTTGTTTTTCTGGTGATCGCGCTGATCGCCGCCATCTTCGGCTTCGGTGGTATCGCGGCAGGCGC
CGTTGAGATTGCCAAGATCCTCTTCTTCATCTTCGCCATCATGGCTGTGGTCAGCTTTGTGATGGGCCTGATCAAAAAGA
ACTGA

Upstream 100 bases:

>100_bases
CCGATGAGAAAAGACCGCCATTGTCTTTAACCTTGCTGCAGGGCGTTTCAAAGTTTCGACAACGAAACGCCGACCAACCC
AGTCATGCAAGGAGATCGAG

Downstream 100 bases:

>100_bases
CGCGCCCTGCGGCGGCACCGTGGCGACGCCGTCCCGGCGCCTTTCCCGGTTTCATTGCCGGGCAAGGCATGACGCGAAGC
CCCCGTCACAGACCCACCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 54; Mature: 54

Protein sequence:

>54_residues
MLHYSVVFLVIALIAAIFGFGGIAAGAVEIAKILFFIFAIMAVVSFVMGLIKKN

Sequences:

>Translated_54_residues
MLHYSVVFLVIALIAAIFGFGGIAAGAVEIAKILFFIFAIMAVVSFVMGLIKKN
>Mature_54_residues
MLHYSVVFLVIALIAAIFGFGGIAAGAVEIAKILFFIFAIMAVVSFVMGLIKKN

Specific function: Unknown

COG id: COG5487

COG function: function code S; Small integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0391 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y879_POLSJ (Q12F57)

Other databases:

- EMBL:   CP000316
- RefSeq:   YP_547733.1
- STRING:   Q12F57
- GeneID:   4011479
- GenomeReviews:   CP000316_GR
- KEGG:   pol:Bpro_0879
- NMPDR:   fig|296591.1.peg.3054
- eggNOG:   NOG120797
- OMA:   RYAVIFF
- ProtClustDB:   PRK13682
- BioCyc:   PSP296591:BPRO_0879-MONOMER
- HAMAP:   MF_01361
- InterPro:   IPR009760
- PIRSF:   PIRSF036466

Pfam domain/function: PF07043 DUF1328

EC number: NA

Molecular weight: Translated: 5747; Mature: 5747

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x13d3be74)-; HASH(0x142f4e10)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHYSVVFLVIALIAAIFGFGGIAAGAVEIAKILFFIFAIMAVVSFVMGLIKKN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MLHYSVVFLVIALIAAIFGFGGIAAGAVEIAKILFFIFAIMAVVSFVMGLIKKN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA