| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is nreB [H]
Identifier: 91786782
GI number: 91786782
Start: 900243
End: 901583
Strand: Reverse
Name: nreB [H]
Synonym: Bpro_0880
Alternate gene names: 91786782
Gene position: 901583-900243 (Counterclockwise)
Preceding gene: 91786784
Following gene: 91786781
Centisome position: 17.34
GC content: 62.49
Gene sequence:
>1341_bases GTGAAAAAATTTTCGATCCCCAAAATGGCCATCAGCCTGCCCTTGGCGGTGCTGGCCGCCGCCATCCTCATTTTCATCAA TGAGGCGAGTTTTCACGAGTCCACGGCGGCGGCGGCCAACATCGAGGAGGCGCAGCAAACCCGTGAAGCCATCAATCAAT TGCTGCAGCGCATGCTGGATGCGGAAACCGGCTCACGAGGCTACCTGCTGACCGGCGACCCGCGCTATCTGGAGCCCTAC AACAACGCCACGGCAGATATCAGCCAGAACCTGGATGTGCTGCGTCAGCTGTTCATCCCCTACCGGAACGAACTCGCGGA GTTCGGCGTCATGTCGCGGCATATTTCGCGAAAACTGGCCGAAATGGACCTGAGCGTGCGCATGCGCAAGGAAGGCAATG AAGATGCCTGGAAATTTGTCCTGACCACGGATGTCGGCAAGGAGCACATGGAGGCGATTCGCGTGCAATCGTCCAAGCTG GCCGCCAGCAGCATCCGCAAGATGGAACTGGGCCAGGCCCAGATCAAGAAAACACTGCAGCTGTCCCGCATCGGCGTGGC CACCATGGCGCTGGCCGGCCTGCTGGCTTTTTACATGTACCTGCTGCAAACCAAGGCCCTGCTCGCCTCGGGCCGGCGCG AGCAGGAGTCCCTGCAGCGCGAGCGTGACCTGCTGGAAAAGCAGGTGCGGGAGCGCACCGCCACCCTGGCAGAACTCGCC ACCCATTTGCAGAATGTGCGCGAGGATGAACGGGGCCACCTGGCCCGCGAGCTGCACGACGAACTGGGCGCACTTCTGAC AGCCGCCAAACTGGATGTCGCCAGACTGCGGTCACGCCTGGCGGGCAACCTGCCGGAAGCGGCAGAACGCCTGGAGCACC TGACCAGCACGCTGAACAGCGGTATTGCCCTGAAGCGCCGCATTGTCGAAGATTTGCGCCCCTCCTCGTTGTCCCACCTG GGTCTGGTGGCCTCCCTGGAAATTCTGGCGCGGGAATTCGAGGAGCGATCCGGCCTGTCCATCACCACCGACCTGGAGTC AGTGGAACTTGGCGGTTCGGCCCAGCTGACGGTGTACCGGCTGGTGCAGGAGTCGCTGACCAACATCGCCAAATATGCCG CGGCCAGCCAGGCCGAGATCAGCCTTCACAATTTCGACCGATACATCTCCGTGGAGGTCAAGGACAACGGCAAAGGCTTC CGAGTGGACAGCGTGGGGCCCACCAGCCACGGCCTGGCGGGCATGCGCCATCGCGTGGAGGCCGCCGGCGGTCGCCTGAC GGTCACCAGCACCGAGGGAAGCGGCACGCGGATTTCTGCCGTGCTGCCCAAAACGATTTGA
Upstream 100 bases:
>100_bases CAATCAACGCAATGAAAAGGATGGCCGGACCGGACATCCGCATTGGCTTTAGTGCCCATTATTGACGAATTATTCCCCGA AGTATCCAACGGAGCCAGCC
Downstream 100 bases:
>100_bases CCGGACCGCACGCGGGCGCCCAACAGTAACAAACTGTCAGCGCCCTCCTACAGCGCCTCCCCCCTGGAACTGACAGGGGC ACCCGTCCACAGCCGATGAG
Product: multi-sensor signal transduction histidine kinase
Products: NA
Alternate protein names: Nitrogen regulation protein B [H]
Number of amino acids: Translated: 446; Mature: 446
Protein sequence:
>446_residues MKKFSIPKMAISLPLAVLAAAILIFINEASFHESTAAAANIEEAQQTREAINQLLQRMLDAETGSRGYLLTGDPRYLEPY NNATADISQNLDVLRQLFIPYRNELAEFGVMSRHISRKLAEMDLSVRMRKEGNEDAWKFVLTTDVGKEHMEAIRVQSSKL AASSIRKMELGQAQIKKTLQLSRIGVATMALAGLLAFYMYLLQTKALLASGRREQESLQRERDLLEKQVRERTATLAELA THLQNVREDERGHLARELHDELGALLTAAKLDVARLRSRLAGNLPEAAERLEHLTSTLNSGIALKRRIVEDLRPSSLSHL GLVASLEILAREFEERSGLSITTDLESVELGGSAQLTVYRLVQESLTNIAKYAAASQAEISLHNFDRYISVEVKDNGKGF RVDSVGPTSHGLAGMRHRVEAAGGRLTVTSTEGSGTRISAVLPKTI
Sequences:
>Translated_446_residues MKKFSIPKMAISLPLAVLAAAILIFINEASFHESTAAAANIEEAQQTREAINQLLQRMLDAETGSRGYLLTGDPRYLEPY NNATADISQNLDVLRQLFIPYRNELAEFGVMSRHISRKLAEMDLSVRMRKEGNEDAWKFVLTTDVGKEHMEAIRVQSSKL AASSIRKMELGQAQIKKTLQLSRIGVATMALAGLLAFYMYLLQTKALLASGRREQESLQRERDLLEKQVRERTATLAELA THLQNVREDERGHLARELHDELGALLTAAKLDVARLRSRLAGNLPEAAERLEHLTSTLNSGIALKRRIVEDLRPSSLSHL GLVASLEILAREFEERSGLSITTDLESVELGGSAQLTVYRLVQESLTNIAKYAAASQAEISLHNFDRYISVEVKDNGKGF RVDSVGPTSHGLAGMRHRVEAAGGRLTVTSTEGSGTRISAVLPKTI >Mature_446_residues MKKFSIPKMAISLPLAVLAAAILIFINEASFHESTAAAANIEEAQQTREAINQLLQRMLDAETGSRGYLLTGDPRYLEPY NNATADISQNLDVLRQLFIPYRNELAEFGVMSRHISRKLAEMDLSVRMRKEGNEDAWKFVLTTDVGKEHMEAIRVQSSKL AASSIRKMELGQAQIKKTLQLSRIGVATMALAGLLAFYMYLLQTKALLASGRREQESLQRERDLLEKQVRERTATLAELA THLQNVREDERGHLARELHDELGALLTAAKLDVARLRSRLAGNLPEAAERLEHLTSTLNSGIALKRRIVEDLRPSSLSHL GLVASLEILAREFEERSGLSITTDLESVELGGSAQLTVYRLVQESLTNIAKYAAASQAEISLHNFDRYISVEVKDNGKGF RVDSVGPTSHGLAGMRHRVEAAGGRLTVTSTEGSGTRISAVLPKTI
Specific function: Member of the two-component regulatory system nreB/nreC involved in the control of dissimilatory nitrate/nitrite reduction in response to oxygen. NreB functions as a direct oxygen sensor histidine kinase which is autophosphorylated, in the absence of oxyg
COG id: COG4585
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1787474, Length=241, Percent_Identity=29.045643153527, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI87082311, Length=248, Percent_Identity=29.8387096774194, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI1788812, Length=194, Percent_Identity=26.8041237113402, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR000014 - InterPro: IPR004358 - InterPro: IPR011712 - InterPro: IPR005467 - InterPro: IPR017203 [H]
Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 49263; Mature: 49263
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFSIPKMAISLPLAVLAAAILIFINEASFHESTAAAANIEEAQQTREAINQLLQRMLD CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC AETGSRGYLLTGDPRYLEPYNNATADISQNLDVLRQLFIPYRNELAEFGVMSRHISRKLA CCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EMDLSVRMRKEGNEDAWKFVLTTDVGKEHMEAIRVQSSKLAASSIRKMELGQAQIKKTLQ HHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSRIGVATMALAGLLAFYMYLLQTKALLASGRREQESLQRERDLLEKQVRERTATLAELA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH THLQNVREDERGHLARELHDELGALLTAAKLDVARLRSRLAGNLPEAAERLEHLTSTLNS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC GIALKRRIVEDLRPSSLSHLGLVASLEILAREFEERSGLSITTDLESVELGGSAQLTVYR CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHCCCCCCHHHHHH LVQESLTNIAKYAAASQAEISLHNFDRYISVEVKDNGKGFRVDSVGPTSHGLAGMRHRVE HHHHHHHHHHHHHHCCCCCEEEECCCEEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHH AAGGRLTVTSTEGSGTRISAVLPKTI HCCCEEEEEECCCCCCEEEEECCCCC >Mature Secondary Structure MKKFSIPKMAISLPLAVLAAAILIFINEASFHESTAAAANIEEAQQTREAINQLLQRMLD CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC AETGSRGYLLTGDPRYLEPYNNATADISQNLDVLRQLFIPYRNELAEFGVMSRHISRKLA CCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EMDLSVRMRKEGNEDAWKFVLTTDVGKEHMEAIRVQSSKLAASSIRKMELGQAQIKKTLQ HHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSRIGVATMALAGLLAFYMYLLQTKALLASGRREQESLQRERDLLEKQVRERTATLAELA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH THLQNVREDERGHLARELHDELGALLTAAKLDVARLRSRLAGNLPEAAERLEHLTSTLNS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC GIALKRRIVEDLRPSSLSHLGLVASLEILAREFEERSGLSITTDLESVELGGSAQLTVYR CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHCCCCCCHHHHHH LVQESLTNIAKYAAASQAEISLHNFDRYISVEVKDNGKGFRVDSVGPTSHGLAGMRHRVE HHHHHHHHHHHHHHCCCCCEEEECCCEEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHH AAGGRLTVTSTEGSGTRISAVLPKTI HCCCEEEEEECCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA