Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91786780

Identifier: 91786780

GI number: 91786780

Start: 899321

End: 899866

Strand: Reverse

Name: 91786780

Synonym: Bpro_0878

Alternate gene names: NA

Gene position: 899866-899321 (Counterclockwise)

Preceding gene: 91786781

Following gene: 91786779

Centisome position: 17.3

GC content: 62.27

Gene sequence:

>546_bases
GTGGCGACGCCGTCCCGGCGCCTTTCCCGGTTTCATTGCCGGGCAAGGCATGACGCGAAGCCCCCGTCACAGACCCACCT
GCATATCGCCGTTTATCCCTTTGCCCCTCCGAACCCCCAACTCCTGAAGGATTCCCAAATGACCCCCAATATGCCCTCCT
CCCCCACCGGCCTTGACACCATGACCGGCATGCGCCAGGCCTCCGATGAGCTGCTCGCCAATGCCGTCAAGGCCGTGGAA
TCGACCAGGGACCATGCGAATGATGCGCTGGACAAGGCAGAAAACAAGGTGCGCGAATTGCGCGGTAGCGTGGACCCCGT
TGTGGACATGCTCGCATCCAAGGCCCAAAAGCTGGCCCGTCAGAGCCTGGACCTGGCATCCGAGGCCAAAGAGCGTGCCC
AGCATTCACTCTCCCGCGCCACAGGTGCCACGACGCGGTATGTGTCCGAGCAACCCATGCGTTCGATACTCATTGCGGCG
GCAGTCGGTGCGGCCGTGGCCCTGCTGATTTCCTCTTCACGCCATCGCAACGAACAGCGTTATTGA

Upstream 100 bases:

>100_bases
GAGATTGCCAAGATCCTCTTCTTCATCTTCGCCATCATGGCTGTGGTCAGCTTTGTGATGGGCCTGATCAAAAAGAACTG
ACGCGCCCTGCGGCGGCACC

Downstream 100 bases:

>100_bases
GAAGGCGTTATCAAGGTCGCTCCTGCTCGTCGCCGATGCTTAACCAACCCACTCCACCATCATGCTGCACCCACTTTTTT
CAACCCTGATCCAGAGGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MATPSRRLSRFHCRARHDAKPPSQTHLHIAVYPFAPPNPQLLKDSQMTPNMPSSPTGLDTMTGMRQASDELLANAVKAVE
STRDHANDALDKAENKVRELRGSVDPVVDMLASKAQKLARQSLDLASEAKERAQHSLSRATGATTRYVSEQPMRSILIAA
AVGAAVALLISSSRHRNEQRY

Sequences:

>Translated_181_residues
MATPSRRLSRFHCRARHDAKPPSQTHLHIAVYPFAPPNPQLLKDSQMTPNMPSSPTGLDTMTGMRQASDELLANAVKAVE
STRDHANDALDKAENKVRELRGSVDPVVDMLASKAQKLARQSLDLASEAKERAQHSLSRATGATTRYVSEQPMRSILIAA
AVGAAVALLISSSRHRNEQRY
>Mature_180_residues
ATPSRRLSRFHCRARHDAKPPSQTHLHIAVYPFAPPNPQLLKDSQMTPNMPSSPTGLDTMTGMRQASDELLANAVKAVES
TRDHANDALDKAENKVRELRGSVDPVVDMLASKAQKLARQSLDLASEAKERAQHSLSRATGATTRYVSEQPMRSILIAAA
VGAAVALLISSSRHRNEQRY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19818; Mature: 19686

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATPSRRLSRFHCRARHDAKPPSQTHLHIAVYPFAPPNPQLLKDSQMTPNMPSSPTGLDT
CCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHCCCCCCCCCCCCCCCHHH
MTGMRQASDELLANAVKAVESTRDHANDALDKAENKVRELRGSVDPVVDMLASKAQKLAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
QSLDLASEAKERAQHSLSRATGATTRYVSEQPMRSILIAAAVGAAVALLISSSRHRNEQR
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Y
C
>Mature Secondary Structure 
ATPSRRLSRFHCRARHDAKPPSQTHLHIAVYPFAPPNPQLLKDSQMTPNMPSSPTGLDT
CCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHCCCCCCCCCCCCCCCHHH
MTGMRQASDELLANAVKAVESTRDHANDALDKAENKVRELRGSVDPVVDMLASKAQKLAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
QSLDLASEAKERAQHSLSRATGATTRYVSEQPMRSILIAAAVGAAVALLISSSRHRNEQR
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Y
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA