| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is hemK [H]
Identifier: 91786751
GI number: 91786751
Start: 869833
End: 870696
Strand: Reverse
Name: hemK [H]
Synonym: Bpro_0849
Alternate gene names: 91786751
Gene position: 870696-869833 (Counterclockwise)
Preceding gene: 91786752
Following gene: 91786750
Centisome position: 16.74
GC content: 67.82
Gene sequence:
>864_bases ATGAGCCAACCGATAAACCAGCCCACCTGCGCCCAAGCCCTGAGTGCCGCCCAGGCATTGGGGCTGGATCGGCTGGACGC CCAGTTGCTGCTGCTGCATGCGCTGGGCAAGCCCGCCATCGACCGGGCCTGGCTGCTGGCGCACGACACCGATCAGCTGA CGGATGAAGTCGCCCAGCGTATGCGGGCATTCAGCCTGCGCCGGGCAAGGGGTGAACCCCTGGCCTATATCGTCGGCAGC AAGGAGTTCTTTGGGCTGGAACTGCAGGTGGATGCCCGGGTGCTGGTGCCCCGCCCCGACACCGAAACGCTGGTGCATTG GTCACTGGAAGTACTGCAGGCGCCCGCGATGACGGAACGGCCGCAGATTCTGGACCTGGGCACCGGCAGCGGCGCCATTG CACTGGCCATCGCGCACAGTCTGCAGGCGGCCGGCCGACCAGCCCGGGTTGTTGCGGTGGACGCGAGTGCCGGCGCACTG GCCGTGGCCCGTGAAAATGCCCGGCGCCTCCAGCTGGAACTCGAATTCAGCCAGAGCAACTGGCTGGATGAAGTTGGTGG ACACTTTCACCTGATCGCCAGCAATCCGCCCTACATCGCCAGCGCTGACCCTCACCTGGTGGCGCTGGCGCATGAGCCTT TGGGGTCGCTGGCCGCGGGACCAGACGGGCTGGGGGACATCCGGCAGATTGTGGCGAAGGCGCCCGAACACCTGGCGCCC GGCGGCTGGCTGCTGCTGGAGCACGGCTATGACCAGGCGGCTGCGGTACGCGGTCTCCTGCGCGAGCGGGGCTTCGCACA GGTCCAGAGCCGGCTGGACCTGGCCGGCATCGCACGCTGCTCGGGCGGTCAATGGCCGGGTTAA
Upstream 100 bases:
>100_bases AGATGGCCGGCTTCCGCTTCTCACATGCCAAATCGGCCTCGGGCCCAATTTTTACCCGCGCAAGTAGCTATTGTTTTTAT AGCAAATGCAGGACACCCCA
Downstream 100 bases:
>100_bases GTATCCCGCGTGGAGTTCGGCAGGTCCGGACGGACCAGTAGCACCCGAGCACCGGGCCTCAAACAGCGGGATAATCAAAT AGTTGAATTCTGATTGCCAG
Product: HemK family modification methylase
Products: NA
Alternate protein names: M.HindHemKP [H]
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MSQPINQPTCAQALSAAQALGLDRLDAQLLLLHALGKPAIDRAWLLAHDTDQLTDEVAQRMRAFSLRRARGEPLAYIVGS KEFFGLELQVDARVLVPRPDTETLVHWSLEVLQAPAMTERPQILDLGTGSGAIALAIAHSLQAAGRPARVVAVDASAGAL AVARENARRLQLELEFSQSNWLDEVGGHFHLIASNPPYIASADPHLVALAHEPLGSLAAGPDGLGDIRQIVAKAPEHLAP GGWLLLEHGYDQAAAVRGLLRERGFAQVQSRLDLAGIARCSGGQWPG
Sequences:
>Translated_287_residues MSQPINQPTCAQALSAAQALGLDRLDAQLLLLHALGKPAIDRAWLLAHDTDQLTDEVAQRMRAFSLRRARGEPLAYIVGS KEFFGLELQVDARVLVPRPDTETLVHWSLEVLQAPAMTERPQILDLGTGSGAIALAIAHSLQAAGRPARVVAVDASAGAL AVARENARRLQLELEFSQSNWLDEVGGHFHLIASNPPYIASADPHLVALAHEPLGSLAAGPDGLGDIRQIVAKAPEHLAP GGWLLLEHGYDQAAAVRGLLRERGFAQVQSRLDLAGIARCSGGQWPG >Mature_286_residues SQPINQPTCAQALSAAQALGLDRLDAQLLLLHALGKPAIDRAWLLAHDTDQLTDEVAQRMRAFSLRRARGEPLAYIVGSK EFFGLELQVDARVLVPRPDTETLVHWSLEVLQAPAMTERPQILDLGTGSGAIALAIAHSLQAAGRPARVVAVDASAGALA VARENARRLQLELEFSQSNWLDEVGGHFHLIASNPPYIASADPHLVALAHEPLGSLAAGPDGLGDIRQIVAKAPEHLAPG GWLLLEHGYDQAAAVRGLLRERGFAQVQSRLDLAGIARCSGGQWPG
Specific function: Probable protein methyltransferase. May methylate a Gln residue in target proteins [H]
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hemK family [H]
Homologues:
Organism=Homo sapiens, GI7705409, Length=248, Percent_Identity=33.8709677419355, Blast_Score=92, Evalue=5e-19, Organism=Escherichia coli, GI1787463, Length=280, Percent_Identity=40.3571428571429, Blast_Score=170, Evalue=9e-44, Organism=Escherichia coli, GI87082085, Length=209, Percent_Identity=35.4066985645933, Blast_Score=91, Evalue=6e-20, Organism=Drosophila melanogaster, GI24582226, Length=218, Percent_Identity=31.651376146789, Blast_Score=91, Evalue=7e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR019874 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: 2.1.1.-
Molecular weight: Translated: 30627; Mature: 30496
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPINQPTCAQALSAAQALGLDRLDAQLLLLHALGKPAIDRAWLLAHDTDQLTDEVAQR CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHH MRAFSLRRARGEPLAYIVGSKEFFGLELQVDARVLVPRPDTETLVHWSLEVLQAPAMTER HHHHHHHHHCCCCEEEEECCCEEEEEEEEECCEEEECCCCCCHHHHHHHHHHHCCCCCCC PQILDLGTGSGAIALAIAHSLQAAGRPARVVAVDASAGALAVARENARRLQLELEFSQSN CCEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCEEEEEEEEECCCC WLDEVGGHFHLIASNPPYIASADPHLVALAHEPLGSLAAGPDGLGDIRQIVAKAPEHLAP CHHHHCCEEEEEECCCCEEECCCCCEEEEECCCCHHHCCCCCCHHHHHHHHHHCCHHCCC GGWLLLEHGYDQAAAVRGLLRERGFAQVQSRLDLAGIARCSGGQWPG CCEEEEECCCCHHHHHHHHHHHCCHHHHHHHCCHHHHHCCCCCCCCC >Mature Secondary Structure SQPINQPTCAQALSAAQALGLDRLDAQLLLLHALGKPAIDRAWLLAHDTDQLTDEVAQR CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHH MRAFSLRRARGEPLAYIVGSKEFFGLELQVDARVLVPRPDTETLVHWSLEVLQAPAMTER HHHHHHHHHCCCCEEEEECCCEEEEEEEEECCEEEECCCCCCHHHHHHHHHHHCCCCCCC PQILDLGTGSGAIALAIAHSLQAAGRPARVVAVDASAGALAVARENARRLQLELEFSQSN CCEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCEEEEEEEEECCCC WLDEVGGHFHLIASNPPYIASADPHLVALAHEPLGSLAAGPDGLGDIRQIVAKAPEHLAP CHHHHCCEEEEEECCCCEEECCCCCEEEEECCCCHHHCCCCCCHHHHHHHHHHCCHHCCC GGWLLLEHGYDQAAAVRGLLRERGFAQVQSRLDLAGIARCSGGQWPG CCEEEEECCCCHHHHHHHHHHHCCHHHHHHHCCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]