Click here to switch to the map view.

The map label for this gene is ydhD [C]

Identifier: 91786750

GI number: 91786750

Start: 869314

End: 869643

Strand: Reverse

Name: ydhD [C]

Synonym: Bpro_0848

Alternate gene names: 91786750

Gene position: 869643-869314 (Counterclockwise)

Preceding gene: 91786751

Following gene: 91786741

Centisome position: 16.72

GC content: 57.58

Gene sequence:

>330_bases
ATGAGCACTACCGACACCACCCAGCAACGCATTGACCAGATCGTCAAATCCAGCGACGTCGTCCTGTTTATGAAAGGCAC
GGCCCAGTTCCCGATGTGCGGCTTTTCAGGCCGCGCCATCCAGGTGCTGAAAGCCTGCGGGGTGAACAAGCCTGTGACGG
TGAACGTGCTGGAAGACGAGGAAATCCGCCACGGCATCAAGGAATACAGCAATTGGCCCACCATTCCCCAGCTGTATGTG
AAGGGCGAGTTCATTGGCGGTTCGGACATCATGATGGAGATGTACCAGAACGGCGAACTCCAGCAGGTGCTGGGAACGCC
CACCGCCTGA

Upstream 100 bases:

>100_bases
CTGATTGCCAGATTCCATCTATTGAAGAACGACCCGGCCGAAAACCTCTGTTTTTCGACCCCGCACGGGCTCTGAGCGCC
CATTCCAAAAGGATTTCACC

Downstream 100 bases:

>100_bases
GAGCTGATTCGTTATTGCCCCCTGGCCCGACCGCAGCGAGCCAGGCACGCGGTTAACGCGTATAGCCTTCGCAGGCACCC
GCGTTCACCGCCCCTTTGCA

Product: glutaredoxin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MSTTDTTQQRIDQIVKSSDVVLFMKGTAQFPMCGFSGRAIQVLKACGVNKPVTVNVLEDEEIRHGIKEYSNWPTIPQLYV
KGEFIGGSDIMMEMYQNGELQQVLGTPTA

Sequences:

>Translated_109_residues
MSTTDTTQQRIDQIVKSSDVVLFMKGTAQFPMCGFSGRAIQVLKACGVNKPVTVNVLEDEEIRHGIKEYSNWPTIPQLYV
KGEFIGGSDIMMEMYQNGELQQVLGTPTA
>Mature_108_residues
STTDTTQQRIDQIVKSSDVVLFMKGTAQFPMCGFSGRAIQVLKACGVNKPVTVNVLEDEEIRHGIKEYSNWPTIPQLYVK
GEFIGGSDIMMEMYQNGELQQVLGTPTA

Specific function: Unknown

COG id: COG0278

COG function: function code O; Glutaredoxin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42516576, Length=96, Percent_Identity=52.0833333333333, Blast_Score=119, Evalue=7e-28,
Organism=Homo sapiens, GI95113651, Length=97, Percent_Identity=49.4845360824742, Blast_Score=105, Evalue=6e-24,
Organism=Escherichia coli, GI1787943, Length=104, Percent_Identity=45.1923076923077, Blast_Score=109, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI17556042, Length=100, Percent_Identity=54, Blast_Score=109, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI71988153, Length=92, Percent_Identity=42.3913043478261, Blast_Score=87, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI71988159, Length=95, Percent_Identity=41.0526315789474, Blast_Score=84, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6325198, Length=106, Percent_Identity=50.9433962264151, Blast_Score=109, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6320303, Length=84, Percent_Identity=42.8571428571429, Blast_Score=80, Evalue=5e-17,
Organism=Saccharomyces cerevisiae, GI6321022, Length=84, Percent_Identity=41.6666666666667, Blast_Score=80, Evalue=6e-17,
Organism=Drosophila melanogaster, GI24642023, Length=90, Percent_Identity=45.5555555555556, Blast_Score=104, Evalue=9e-24,
Organism=Drosophila melanogaster, GI19921242, Length=104, Percent_Identity=43.2692307692308, Blast_Score=96, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002109
- InterPro:   IPR014434
- InterPro:   IPR004480
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 12088; Mature: 11957

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTDTTQQRIDQIVKSSDVVLFMKGTAQFPMCGFSGRAIQVLKACGVNKPVTVNVLEDE
CCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCH
EIRHGIKEYSNWPTIPQLYVKGEFIGGSDIMMEMYQNGELQQVLGTPTA
HHHHHHHHHCCCCCCCEEEEEEEEECCHHHHHHHHCCCCHHHHCCCCCC
>Mature Secondary Structure 
STTDTTQQRIDQIVKSSDVVLFMKGTAQFPMCGFSGRAIQVLKACGVNKPVTVNVLEDE
CCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCH
EIRHGIKEYSNWPTIPQLYVKGEFIGGSDIMMEMYQNGELQQVLGTPTA
HHHHHHHHHCCCCCCCEEEEEEEEECCHHHHHHHHCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]