| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786734
Identifier: 91786734
GI number: 91786734
Start: 855021
End: 855677
Strand: Reverse
Name: 91786734
Synonym: Bpro_0832
Alternate gene names: NA
Gene position: 855677-855021 (Counterclockwise)
Preceding gene: 91786735
Following gene: 91786728
Centisome position: 16.45
GC content: 61.95
Gene sequence:
>657_bases GTGACAGCGCCCGGCATCGCGTCTGCAACGGCCCTCAGGCAATTTTCAAGAAGAAGGTGCCTGCAGTCCCTGTCTGCCGC GTGCATTCCGTTCTTATTTTCAGAGCAGGCGAGCGCCGGCGCCCAGATTGAAGAGCCATTGATGGACTCGGTCCGATCGG CACTGAGCTCGGCCGTCGCCAACCAGGCCCCCCCGGTGCCGGAGTTCAAGGACACCGAAAGCCGGCTGGCGTATCTGCGC TGGCTGGGCGCCATGAGCGATCGCCTGAGAAAGAAAAACCCCGAGTGGCAAATCCGCAAGGAGTTCCTGCAAACCGCCTG GTATGAGAGCAAACGCGCCGGGCTGGACGTCACGCTGGTCCTCGGCCTGATCCAGGTCGAAAGCAATTTCCGCAAGTTCG CCGTGAGTAACGTGGGCGCGCGCGGTTACATGCAGGTCATGCCCTTCTGGACACGCGTGATTGGAGACGGCGATCCGTCC AAGCTCTTTCACATGCAGACCAATTTGCGCTTCGGCTGCGTCATCCTTCGCCATTACCTGGACCGGGAACGCGGCGATCT GTTCTTGGGCCTGGGCCGCTACAACGGCTCGCGCGGCAAGGCGCCCTACCCGAACGCGGTGATGGGTGCGAGCAAACAGT GGGAATTCAGCGGCTGA
Upstream 100 bases:
>100_bases TGAAAGAAGGCCAGCTTGAATACCAGCACCGGCGTGACGCCGCCTCCAGCAAGGTCGATGCAGCCACTGCGCTGGACTTT CTCAAGGGGAAACTGGCCCT
Downstream 100 bases:
>100_bases AACCGCTTTCGCGCATAAAACAAGCCAGAACCCGAATGAGCTCCCGGTTTACAGCTATCAATTAGAGAGCAAACCGGGTT GGGCCGGCGACCAGCGCGTC
Product: lytic transglycosylase catalytic subunit
Products: NA
Alternate protein names: Transglycosylase SLT Domain Protein; Transglycosylase; Lytic Murein Transglycosylase; Twin-Arginine Translocation Pathway Signal; Soluble Lytic Murein Transglycosylase-Like; Lytic Transglycosylase; SLT Domain-Containing Protein; Signal Peptide Protein; Soluble Lytic Murein Transglycosylase
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MTAPGIASATALRQFSRRRCLQSLSAACIPFLFSEQASAGAQIEEPLMDSVRSALSSAVANQAPPVPEFKDTESRLAYLR WLGAMSDRLRKKNPEWQIRKEFLQTAWYESKRAGLDVTLVLGLIQVESNFRKFAVSNVGARGYMQVMPFWTRVIGDGDPS KLFHMQTNLRFGCVILRHYLDRERGDLFLGLGRYNGSRGKAPYPNAVMGASKQWEFSG
Sequences:
>Translated_218_residues MTAPGIASATALRQFSRRRCLQSLSAACIPFLFSEQASAGAQIEEPLMDSVRSALSSAVANQAPPVPEFKDTESRLAYLR WLGAMSDRLRKKNPEWQIRKEFLQTAWYESKRAGLDVTLVLGLIQVESNFRKFAVSNVGARGYMQVMPFWTRVIGDGDPS KLFHMQTNLRFGCVILRHYLDRERGDLFLGLGRYNGSRGKAPYPNAVMGASKQWEFSG >Mature_217_residues TAPGIASATALRQFSRRRCLQSLSAACIPFLFSEQASAGAQIEEPLMDSVRSALSSAVANQAPPVPEFKDTESRLAYLRW LGAMSDRLRKKNPEWQIRKEFLQTAWYESKRAGLDVTLVLGLIQVESNFRKFAVSNVGARGYMQVMPFWTRVIGDGDPSK LFHMQTNLRFGCVILRHYLDRERGDLFLGLGRYNGSRGKAPYPNAVMGASKQWEFSG
Specific function: Unknown
COG id: COG0741
COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24458; Mature: 24327
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPGIASATALRQFSRRRCLQSLSAACIPFLFSEQASAGAQIEEPLMDSVRSALSSAVA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH NQAPPVPEFKDTESRLAYLRWLGAMSDRLRKKNPEWQIRKEFLQTAWYESKRAGLDVTLV HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHH LGLIQVESNFRKFAVSNVGARGYMQVMPFWTRVIGDGDPSKLFHMQTNLRFGCVILRHYL HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHEEEHHCCCHHHHHHHHHHH DRERGDLFLGLGRYNGSRGKAPYPNAVMGASKQWEFSG CCCCCCEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCC >Mature Secondary Structure TAPGIASATALRQFSRRRCLQSLSAACIPFLFSEQASAGAQIEEPLMDSVRSALSSAVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH NQAPPVPEFKDTESRLAYLRWLGAMSDRLRKKNPEWQIRKEFLQTAWYESKRAGLDVTLV HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHH LGLIQVESNFRKFAVSNVGARGYMQVMPFWTRVIGDGDPSKLFHMQTNLRFGCVILRHYL HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHEEEHHCCCHHHHHHHHHHH DRERGDLFLGLGRYNGSRGKAPYPNAVMGASKQWEFSG CCCCCCEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA