| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is metK [H]
Identifier: 91786669
GI number: 91786669
Start: 787571
End: 788752
Strand: Reverse
Name: metK [H]
Synonym: Bpro_0767
Alternate gene names: 91786669
Gene position: 788752-787571 (Counterclockwise)
Preceding gene: 91786672
Following gene: 91786668
Centisome position: 15.17
GC content: 62.77
Gene sequence:
>1182_bases ATGGCGAACGATTTTCTCTTTACTTCCGAATCCGTCTCCGAAGGCCATCCCGACAAGGTCGCCGACCAGATTTCCGATGC CATCCTCGATGCCATCTTCAAGCAGGATCCGCGCAGCCGCGTGGCGGCCGAGACGCTGACCAACACCGGCCTCGTCGTGC TGGCCGGTGAAATCACCACCAATGCGCATGTCGACTACATCCAGGTCGCACGCGACACCATCAAGCGCATCGGCTACGAC AACACCGAGTACGGCATCGACTACAAGGGCTGCGCCGTGCTCGTGGCCTACGACAAGCAGAGCAACGACATCGCCCAGGG CGTTGACCATGCCAGCGACGATCACCTGAACATCGGCGCCGGCGACCAGGGCCTGATGTTTGGCTACGCCTGCGATGAAA CGCCGGAACTGATGCCGGCCCCGATTTATTACGCGCACCGCCTGATGGAGCGCCAGGCCCAGCTGCGCAAGGACGGCCGC CTGCCTTTCCTGCGCCCAGACGCCAAAAGCCAGGTCACCATGCGCTATGTGAACGGCAAACCGCACAGCATCGACACCGT GGTGCTGTCGACCCAGCACAGCCCGGACCAGAGCGAAACGCCTCACAAGATGAAGGCCTCGTTCACCGAAGCCATCATTG AAGAGATCATCAAGCCGGTCCTGCCCAAGGAGTGGCTCAAGGAAACCAAATACCTGATCAACCCGACCGGCCGTTTCGTC ATTGGCGGCCCGCAGGGCGACTGCGGCCTGACCGGCCGCAAGATCATCGTCGACACCTACGGCGGCGCCTGCCCGCATGG CGGCGGCGCGTTCTCGGGCAAGGATCCGAGCAAGGTCGATCGCTCGGCCGCCTATGCCGCCCGCTACGTGGCCAAAAACA TTGTGGCCGCCGGCCTGGCCCGGCAGTGCCAGATCCAGGTGGCTTATGCGATTGGCGTGGCCCGGCCGATGAACGTGACG GTGTACACCGAAGGCACGGGCGTGATCTCCGACGAAAAATTGTCAGCGCTGGTCCACGAACACTTTGACCTGCGTCCCAA AGGCATCATCCAGATGCTGGACCTGCTGCGTCCAATCTACGAAAAGACCGCGGCTTACGGCCACTTCGGCCGGGATGAGC CCGAGTTTTCCTGGGAGCGCACGGATCGGGCCGCTTTGCTGCGGGCCGCGGCAGGGCGATAA
Upstream 100 bases:
>100_bases TACTGAACAACTTGCAGGGCGACATTAAACCAAACTGCTAAAGCGTTCGCCGAGGCACCCCAGCCGGCAACGCGCCGACA AACTTCATGGAGTGTACGCA
Downstream 100 bases:
>100_bases GCCCAGCCCTCCCCAAGCGGCGGACGCCGGTTCCCGCGATGGGCCACGCACTGAAAGCCACCTGCGGGTGGCTTTTTTAT GCGTACATTTTTTGGCGCAG
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase; MAT; Methionine adenosyltransferase [H]
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MANDFLFTSESVSEGHPDKVADQISDAILDAIFKQDPRSRVAAETLTNTGLVVLAGEITTNAHVDYIQVARDTIKRIGYD NTEYGIDYKGCAVLVAYDKQSNDIAQGVDHASDDHLNIGAGDQGLMFGYACDETPELMPAPIYYAHRLMERQAQLRKDGR LPFLRPDAKSQVTMRYVNGKPHSIDTVVLSTQHSPDQSETPHKMKASFTEAIIEEIIKPVLPKEWLKETKYLINPTGRFV IGGPQGDCGLTGRKIIVDTYGGACPHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLARQCQIQVAYAIGVARPMNVT VYTEGTGVISDEKLSALVHEHFDLRPKGIIQMLDLLRPIYEKTAAYGHFGRDEPEFSWERTDRAALLRAAAGR
Sequences:
>Translated_393_residues MANDFLFTSESVSEGHPDKVADQISDAILDAIFKQDPRSRVAAETLTNTGLVVLAGEITTNAHVDYIQVARDTIKRIGYD NTEYGIDYKGCAVLVAYDKQSNDIAQGVDHASDDHLNIGAGDQGLMFGYACDETPELMPAPIYYAHRLMERQAQLRKDGR LPFLRPDAKSQVTMRYVNGKPHSIDTVVLSTQHSPDQSETPHKMKASFTEAIIEEIIKPVLPKEWLKETKYLINPTGRFV IGGPQGDCGLTGRKIIVDTYGGACPHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLARQCQIQVAYAIGVARPMNVT VYTEGTGVISDEKLSALVHEHFDLRPKGIIQMLDLLRPIYEKTAAYGHFGRDEPEFSWERTDRAALLRAAAGR >Mature_392_residues ANDFLFTSESVSEGHPDKVADQISDAILDAIFKQDPRSRVAAETLTNTGLVVLAGEITTNAHVDYIQVARDTIKRIGYDN TEYGIDYKGCAVLVAYDKQSNDIAQGVDHASDDHLNIGAGDQGLMFGYACDETPELMPAPIYYAHRLMERQAQLRKDGRL PFLRPDAKSQVTMRYVNGKPHSIDTVVLSTQHSPDQSETPHKMKASFTEAIIEEIIKPVLPKEWLKETKYLINPTGRFVI GGPQGDCGLTGRKIIVDTYGGACPHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLARQCQIQVAYAIGVARPMNVTV YTEGTGVISDEKLSALVHEHFDLRPKGIIQMLDLLRPIYEKTAAYGHFGRDEPEFSWERTDRAALLRAAAGR
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the e
COG id: COG0192
COG function: function code H; S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase family [H]
Homologues:
Organism=Homo sapiens, GI4557737, Length=380, Percent_Identity=58.1578947368421, Blast_Score=411, Evalue=1e-115, Organism=Homo sapiens, GI5174529, Length=380, Percent_Identity=56.578947368421, Blast_Score=407, Evalue=1e-113, Organism=Escherichia coli, GI1789311, Length=388, Percent_Identity=67.2680412371134, Blast_Score=518, Evalue=1e-148, Organism=Caenorhabditis elegans, GI17538498, Length=381, Percent_Identity=56.1679790026247, Blast_Score=407, Evalue=1e-114, Organism=Caenorhabditis elegans, GI25145633, Length=397, Percent_Identity=54.1561712846348, Blast_Score=403, Evalue=1e-113, Organism=Caenorhabditis elegans, GI17538494, Length=381, Percent_Identity=55.3805774278215, Blast_Score=402, Evalue=1e-112, Organism=Caenorhabditis elegans, GI17551082, Length=402, Percent_Identity=54.228855721393, Blast_Score=402, Evalue=1e-112, Organism=Caenorhabditis elegans, GI32565911, Length=335, Percent_Identity=53.7313432835821, Blast_Score=337, Evalue=5e-93, Organism=Caenorhabditis elegans, GI32565905, Length=381, Percent_Identity=49.6062992125984, Blast_Score=335, Evalue=3e-92, Organism=Caenorhabditis elegans, GI25145635, Length=349, Percent_Identity=51.5759312320917, Blast_Score=330, Evalue=7e-91, Organism=Caenorhabditis elegans, GI32565903, Length=308, Percent_Identity=52.5974025974026, Blast_Score=296, Evalue=1e-80, Organism=Caenorhabditis elegans, GI32565909, Length=84, Percent_Identity=60.7142857142857, Blast_Score=113, Evalue=1e-25, Organism=Saccharomyces cerevisiae, GI6320710, Length=381, Percent_Identity=57.2178477690289, Blast_Score=409, Evalue=1e-115, Organism=Saccharomyces cerevisiae, GI6323209, Length=385, Percent_Identity=56.8831168831169, Blast_Score=408, Evalue=1e-115, Organism=Drosophila melanogaster, GI45552159, Length=380, Percent_Identity=52.8947368421053, Blast_Score=369, Evalue=1e-102, Organism=Drosophila melanogaster, GI24580529, Length=380, Percent_Identity=52.8947368421053, Blast_Score=369, Evalue=1e-102, Organism=Drosophila melanogaster, GI24580537, Length=380, Percent_Identity=52.8947368421053, Blast_Score=369, Evalue=1e-102, Organism=Drosophila melanogaster, GI24580533, Length=380, Percent_Identity=52.8947368421053, Blast_Score=369, Evalue=1e-102, Organism=Drosophila melanogaster, GI24580535, Length=380, Percent_Identity=52.8947368421053, Blast_Score=369, Evalue=1e-102, Organism=Drosophila melanogaster, GI24580531, Length=380, Percent_Identity=52.8947368421053, Blast_Score=369, Evalue=1e-102, Organism=Drosophila melanogaster, GI24580527, Length=380, Percent_Identity=52.1052631578947, Blast_Score=364, Evalue=1e-101, Organism=Drosophila melanogaster, GI24580525, Length=380, Percent_Identity=52.1052631578947, Blast_Score=364, Evalue=1e-101, Organism=Drosophila melanogaster, GI24580541, Length=381, Percent_Identity=49.6062992125984, Blast_Score=339, Evalue=2e-93, Organism=Drosophila melanogaster, GI24580539, Length=119, Percent_Identity=57.1428571428571, Blast_Score=140, Evalue=1e-33,
Paralogues:
None
Copy number: 7,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022631 - InterPro: IPR022630 - InterPro: IPR022629 - InterPro: IPR022628 - InterPro: IPR002133 - InterPro: IPR022636 [H]
Pfam domain/function: PF02773 S-AdoMet_synt_C; PF02772 S-AdoMet_synt_M; PF00438 S-AdoMet_synt_N [H]
EC number: =2.5.1.6 [H]
Molecular weight: Translated: 43112; Mature: 42981
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: PS00376 ADOMET_SYNTHETASE_1 ; PS00377 ADOMET_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANDFLFTSESVSEGHPDKVADQISDAILDAIFKQDPRSRVAAETLTNTGLVVLAGEITT CCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCCC NAHVDYIQVARDTIKRIGYDNTEYGIDYKGCAVLVAYDKQSNDIAQGVDHASDDHLNIGA CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCCCCCCCEEECC GDQGLMFGYACDETPELMPAPIYYAHRLMERQAQLRKDGRLPFLRPDAKSQVTMRYVNGK CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEEEECCC PHSIDTVVLSTQHSPDQSETPHKMKASFTEAIIEEIIKPVLPKEWLKETKYLINPTGRFV CCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCEEECCCCCEE IGGPQGDCGLTGRKIIVDTYGGACPHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLA EECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RQCQIQVAYAIGVARPMNVTVYTEGTGVISDEKLSALVHEHFDLRPKGIIQMLDLLRPIY HHHEEEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH EKTAAYGHFGRDEPEFSWERTDRAALLRAAAGR HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure ANDFLFTSESVSEGHPDKVADQISDAILDAIFKQDPRSRVAAETLTNTGLVVLAGEITT CCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCCC NAHVDYIQVARDTIKRIGYDNTEYGIDYKGCAVLVAYDKQSNDIAQGVDHASDDHLNIGA CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCCCCCCCEEECC GDQGLMFGYACDETPELMPAPIYYAHRLMERQAQLRKDGRLPFLRPDAKSQVTMRYVNGK CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEEEECCC PHSIDTVVLSTQHSPDQSETPHKMKASFTEAIIEEIIKPVLPKEWLKETKYLINPTGRFV CCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCEEECCCCCEE IGGPQGDCGLTGRKIIVDTYGGACPHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLA EECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RQCQIQVAYAIGVARPMNVTVYTEGTGVISDEKLSALVHEHFDLRPKGIIQMLDLLRPIY HHHEEEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH EKTAAYGHFGRDEPEFSWERTDRAALLRAAAGR HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA