Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91786648

Identifier: 91786648

GI number: 91786648

Start: 761586

End: 762833

Strand: Reverse

Name: 91786648

Synonym: Bpro_0746

Alternate gene names: NA

Gene position: 762833-761586 (Counterclockwise)

Preceding gene: 91786652

Following gene: 91786647

Centisome position: 14.67

GC content: 62.5

Gene sequence:

>1248_bases
ATGAAAAAACTGACCCTTGTCGCCACCGCAGTGATGGGACTTTTGTCCACCACGGCCGCCATGGCCCAAAGCACCGTGAC
TCTTTACGGCCTGCTTGACGGTGGCTACAACCACGTCTCCGGCCTCAGGCAGGGCAGCGTCAACACGATCGCCAGCGGCA
TCATGGAAGGTTCACGCTTCGGCCTTCGCGGCACGGAAGACATCGGCGGCGGCTACAAAGCCATCTTCACCCTCGAAAAC
CGCTTCGAACTGGATACCGGATCGGTCACCAACCGACCCAACTCCGGCGCCCAGTTGCCTGACCGCCTGAGCAATGCCGC
GCTGATGGGCCTGCCTGGCGCCGTGCAGCCAGTCCTTAACGCCGTCGGCGCGAGCATTGGTTCCACGGTGGGCGTGAACA
TCGCCGGCAACCTGTTTGACCGCCAGGCCTTTGCCGGCCTGATCACGCCAGTGGGTGCATTCACCTTTGGCCGCCAGTAC
ACGCCAGGCTATTTGACCAGCGCAACGTTCGACGCCACACAGACCCAGTCGAGCCTAGCCATGGGCCAGATCGCCACCTT
CCCACCCTCCGTCGACATTCGCCTGAGCAATACCGTGCAGTACGGCATTCAGATGAGCGGCGTGACCGCCACGCTGATGT
ATGGCGCGGGCGAAGTCGCCGGCGACAATGCCAAGGGTCGTTTTTATGGCGGCATGGCCATGTACAAGGGCACCGGCTTC
TCGGTGGGCGTGGGCCACAACACGCGCAACAACGAACTGGGTCAAAAATCCCTGACCGACACCGTCCTTGGCGCTACGGT
CAATGTGGGACCCGGCACCGTCTATGGCCAGTATGCCAAGATCAAGGACGACAACCCCACGGGCTTGTCCACCATCGCTG
CGACGGTGACCCCCTCGGTTGGCGCAGCGACCGCCGCCCTGATTCAAAACGCCTACATCAACGGCTTCAAGCAGGACGCC
AACCTCATGCACATTGGCTATCGCTTGACCCGCGGCGTTCACACGGTCGTGGTGGCTTACAACCGGCTGGATGACAAGCG
CCCGAACAACGCGGACACCGCCTCCTACGGCGCGACCTACACCTATGCGCTGTCCAAGCGCACCAACCTCAATGCGGTGT
TGACCCGCTTCAACAACAAGGGCCTGGGTCAGGCGGCTCCTGGCGGCAACGGCTTCCTGGGCGGCGTGACGTCCACCGCG
GGCACGGACTCCACCAACATCGCCTTCGGTATCCGTCACACGTTCTGA

Upstream 100 bases:

>100_bases
CCTACGACAGGACATATTGGCCGCTCATTTTTTCTTTCGGTTTTTGTTTTTTGCTTTTTGCTTTTTGCTTTTCTTGTCAA
TTAGAACTTTTGGAGACTCC

Downstream 100 bases:

>100_bases
TCAGGTCCAGGAACACCGCAGAAACGCCGCAGAGGCCCGCCAGCAGCGGGCCTCTCGGTCAAACACCATAAAAGCTCCCT
TTTGGGAGCTTTTTTGTTTC

Product: Outer membrane protein (porin)-like protein

Products: NA

Alternate protein names: Outer Membrane Protein; OmpC Family Outer Membrane Porin; Outer Membrane Porin; Outer Membrane Porin Protein; Outer Membrane Porin OpcP; Porin Signal Peptide Protein; Outer Membrane Porin OmpC Family Protein; Gram-Negative Type Outer Membrane Porin Protein; Gram-Negative Porin; Outer Membrane Protein Signal Peptide Protein; Outer Membrane Protein-Like Protein; Porin Transmembrane Protein; Outer Membrane Protein-Like; Transmembrane Outer Membrane Porin Signal Peptide Protein; Porin Protein; Outer Membrane Pore Protein

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MKKLTLVATAVMGLLSTTAAMAQSTVTLYGLLDGGYNHVSGLRQGSVNTIASGIMEGSRFGLRGTEDIGGGYKAIFTLEN
RFELDTGSVTNRPNSGAQLPDRLSNAALMGLPGAVQPVLNAVGASIGSTVGVNIAGNLFDRQAFAGLITPVGAFTFGRQY
TPGYLTSATFDATQTQSSLAMGQIATFPPSVDIRLSNTVQYGIQMSGVTATLMYGAGEVAGDNAKGRFYGGMAMYKGTGF
SVGVGHNTRNNELGQKSLTDTVLGATVNVGPGTVYGQYAKIKDDNPTGLSTIAATVTPSVGAATAALIQNAYINGFKQDA
NLMHIGYRLTRGVHTVVVAYNRLDDKRPNNADTASYGATYTYALSKRTNLNAVLTRFNNKGLGQAAPGGNGFLGGVTSTA
GTDSTNIAFGIRHTF

Sequences:

>Translated_415_residues
MKKLTLVATAVMGLLSTTAAMAQSTVTLYGLLDGGYNHVSGLRQGSVNTIASGIMEGSRFGLRGTEDIGGGYKAIFTLEN
RFELDTGSVTNRPNSGAQLPDRLSNAALMGLPGAVQPVLNAVGASIGSTVGVNIAGNLFDRQAFAGLITPVGAFTFGRQY
TPGYLTSATFDATQTQSSLAMGQIATFPPSVDIRLSNTVQYGIQMSGVTATLMYGAGEVAGDNAKGRFYGGMAMYKGTGF
SVGVGHNTRNNELGQKSLTDTVLGATVNVGPGTVYGQYAKIKDDNPTGLSTIAATVTPSVGAATAALIQNAYINGFKQDA
NLMHIGYRLTRGVHTVVVAYNRLDDKRPNNADTASYGATYTYALSKRTNLNAVLTRFNNKGLGQAAPGGNGFLGGVTSTA
GTDSTNIAFGIRHTF
>Mature_415_residues
MKKLTLVATAVMGLLSTTAAMAQSTVTLYGLLDGGYNHVSGLRQGSVNTIASGIMEGSRFGLRGTEDIGGGYKAIFTLEN
RFELDTGSVTNRPNSGAQLPDRLSNAALMGLPGAVQPVLNAVGASIGSTVGVNIAGNLFDRQAFAGLITPVGAFTFGRQY
TPGYLTSATFDATQTQSSLAMGQIATFPPSVDIRLSNTVQYGIQMSGVTATLMYGAGEVAGDNAKGRFYGGMAMYKGTGF
SVGVGHNTRNNELGQKSLTDTVLGATVNVGPGTVYGQYAKIKDDNPTGLSTIAATVTPSVGAATAALIQNAYINGFKQDA
NLMHIGYRLTRGVHTVVVAYNRLDDKRPNNADTASYGATYTYALSKRTNLNAVLTRFNNKGLGQAAPGGNGFLGGVTSTA
GTDSTNIAFGIRHTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43014; Mature: 43014

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLTLVATAVMGLLSTTAAMAQSTVTLYGLLDGGYNHVSGLRQGSVNTIASGIMEGSRF
CCCHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCHHHHHHCCCCHHHHHHHHHCCCCC
GLRGTEDIGGGYKAIFTLENRFELDTGSVTNRPNSGAQLPDRLSNAALMGLPGAVQPVLN
CCCCCCCCCCCEEEEEEECCEEEECCCCCCCCCCCCCCCHHHHCCCEEECCCHHHHHHHH
AVGASIGSTVGVNIAGNLFDRQAFAGLITPVGAFTFGRQYTPGYLTSATFDATQTQSSLA
HHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHH
MGQIATFPPSVDIRLSNTVQYGIQMSGVTATLMYGAGEVAGDNAKGRFYGGMAMYKGTGF
HCCEECCCCCEEEEECCEEEECEEECCCEEEEEECCCCCCCCCCCCEEECCEEEEECCCE
SVGVGHNTRNNELGQKSLTDTVLGATVNVGPGTVYGQYAKIKDDNPTGLSTIAATVTPSV
EEECCCCCCCCCCCHHHHHHHHHCEEEECCCCCEEECEEEECCCCCCCHHEEEEECCCCC
GAATAALIQNAYINGFKQDANLMHIGYRLTRGVHTVVVAYNRLDDKRPNNADTASYGATY
HHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCEEEEEEEEHHCCCCCCCCCCCCCCCCEE
TYALSKRTNLNAVLTRFNNKGLGQAAPGGNGFLGGVTSTAGTDSTNIAFGIRHTF
EEEECCCCCCHHEEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MKKLTLVATAVMGLLSTTAAMAQSTVTLYGLLDGGYNHVSGLRQGSVNTIASGIMEGSRF
CCCHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCHHHHHHCCCCHHHHHHHHHCCCCC
GLRGTEDIGGGYKAIFTLENRFELDTGSVTNRPNSGAQLPDRLSNAALMGLPGAVQPVLN
CCCCCCCCCCCEEEEEEECCEEEECCCCCCCCCCCCCCCHHHHCCCEEECCCHHHHHHHH
AVGASIGSTVGVNIAGNLFDRQAFAGLITPVGAFTFGRQYTPGYLTSATFDATQTQSSLA
HHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHH
MGQIATFPPSVDIRLSNTVQYGIQMSGVTATLMYGAGEVAGDNAKGRFYGGMAMYKGTGF
HCCEECCCCCEEEEECCEEEECEEECCCEEEEEECCCCCCCCCCCCEEECCEEEEECCCE
SVGVGHNTRNNELGQKSLTDTVLGATVNVGPGTVYGQYAKIKDDNPTGLSTIAATVTPSV
EEECCCCCCCCCCCHHHHHHHHHCEEEECCCCCEEECEEEECCCCCCCHHEEEEECCCCC
GAATAALIQNAYINGFKQDANLMHIGYRLTRGVHTVVVAYNRLDDKRPNNADTASYGATY
HHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCEEEEEEEEHHCCCCCCCCCCCCCCCCEE
TYALSKRTNLNAVLTRFNNKGLGQAAPGGNGFLGGVTSTAGTDSTNIAFGIRHTF
EEEECCCCCCHHEEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA