Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is coq7 [H]

Identifier: 91786647

GI number: 91786647

Start: 760750

End: 761394

Strand: Reverse

Name: coq7 [H]

Synonym: Bpro_0745

Alternate gene names: 91786647

Gene position: 761394-760750 (Counterclockwise)

Preceding gene: 91786648

Following gene: 91786645

Centisome position: 14.64

GC content: 67.91

Gene sequence:

>645_bases
ATGAGAGAAAAGGCCATGACACCCGCACTCGATACCGCGCTGAATGCTGCAGATGGCGCGCTGCGCACCCTGTTTGCCAA
ACCGCAGGCCAGCCGGACCTGCCCCACCGTGGCGGGCCAGCGCACAGAGCTGAGCACGCAGGAGAAGGCCTTGTCGGGCG
CGCTGATGCGGGTCAACCATGTGGGCGAGGTCTGCGCGCAGGCGCTTTATGCCGCGCAGGCCGTCACCACGCGGGATCCG
GCGCTGCGCCGGCACTTTCTGGCGGCCAGCCGGGAAGAAGGCGATCACCTGGCCTGGACGCGTGAACGGCTCGACGAGCT
CGGCGCGCGGCCTTCACTGCTCAACCCCTTGTGGTACGCCGGGGCCTTTGGCCTCGGGCTGCTGGCAGGTCGTCTGGGTG
ACCGGGTCAGCCTGGGATTTGTCGTGGAGACCGAGCGGCAGGTGGAAGCCCATCTGGCCAGCCACCTGGAGCGCCTGCCC
GAAGGCGATCACGACTCGCGGGCCATTGTGGCGCAAATGAAGGACGATGAAGCCCGCCATGCGCAGGATGCGCAAAACGC
CGGCGCCCTGCCCATGCCTGCGCCCGTCAAGGCCTTGATGCAGGCCTCCGCCAGGCTCATGACCACCACGGCCCACTACC
TCTGA

Upstream 100 bases:

>100_bases
TTTTGTTTCCCGGCCGCCGCGGCACCTGCCCGCACGCCATATACCCCCCGCTTGTCCCCGCCCGTCCCGCCGCGCTAACA
TACTGGAACCTACTGTCCAG

Downstream 100 bases:

>100_bases
ATCTCTGCCCCCTGAAGCCGGGTTCGCTCCAGCCGTCTTTAACCTCCGCACGAACCTCCGCACGACATGCTGCGGTGCCA
TTCGCCCTGGGAGCGGCCCG

Product: putative ubiquinone biosynthesis protein

Products: NA

Alternate protein names: 5-demethoxyubiquinone hydroxylase; DMQ hydroxylase [H]

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MREKAMTPALDTALNAADGALRTLFAKPQASRTCPTVAGQRTELSTQEKALSGALMRVNHVGEVCAQALYAAQAVTTRDP
ALRRHFLAASREEGDHLAWTRERLDELGARPSLLNPLWYAGAFGLGLLAGRLGDRVSLGFVVETERQVEAHLASHLERLP
EGDHDSRAIVAQMKDDEARHAQDAQNAGALPMPAPVKALMQASARLMTTTAHYL

Sequences:

>Translated_214_residues
MREKAMTPALDTALNAADGALRTLFAKPQASRTCPTVAGQRTELSTQEKALSGALMRVNHVGEVCAQALYAAQAVTTRDP
ALRRHFLAASREEGDHLAWTRERLDELGARPSLLNPLWYAGAFGLGLLAGRLGDRVSLGFVVETERQVEAHLASHLERLP
EGDHDSRAIVAQMKDDEARHAQDAQNAGALPMPAPVKALMQASARLMTTTAHYL
>Mature_214_residues
MREKAMTPALDTALNAADGALRTLFAKPQASRTCPTVAGQRTELSTQEKALSGALMRVNHVGEVCAQALYAAQAVTTRDP
ALRRHFLAASREEGDHLAWTRERLDELGARPSLLNPLWYAGAFGLGLLAGRLGDRVSLGFVVETERQVEAHLASHLERLP
EGDHDSRAIVAQMKDDEARHAQDAQNAGALPMPAPVKALMQASARLMTTTAHYL

Specific function: Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol [H]

COG id: COG2941

COG function: function code H; Ubiquinone biosynthesis protein COQ7

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the COQ7 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR011566 [H]

Pfam domain/function: PF03232 COQ7 [H]

EC number: 1.14.13.-

Molecular weight: Translated: 23153; Mature: 23153

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREKAMTPALDTALNAADGALRTLFAKPQASRTCPTVAGQRTELSTQEKALSGALMRVNH
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VGEVCAQALYAAQAVTTRDPALRRHFLAASREEGDHLAWTRERLDELGARPSLLNPLWYA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHH
GAFGLGLLAGRLGDRVSLGFVVETERQVEAHLASHLERLPEGDHDSRAIVAQMKDDEARH
HHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHH
AQDAQNAGALPMPAPVKALMQASARLMTTTAHYL
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MREKAMTPALDTALNAADGALRTLFAKPQASRTCPTVAGQRTELSTQEKALSGALMRVNH
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VGEVCAQALYAAQAVTTRDPALRRHFLAASREEGDHLAWTRERLDELGARPSLLNPLWYA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHH
GAFGLGLLAGRLGDRVSLGFVVETERQVEAHLASHLERLPEGDHDSRAIVAQMKDDEARH
HHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHH
AQDAQNAGALPMPAPVKALMQASARLMTTTAHYL
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA