Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is dlpA [H]

Identifier: 91786633

GI number: 91786633

Start: 745958

End: 746680

Strand: Direct

Name: dlpA [H]

Synonym: Bpro_0731

Alternate gene names: 91786633

Gene position: 745958-746680 (Clockwise)

Preceding gene: 91786632

Following gene: 91786635

Centisome position: 14.34

GC content: 69.16

Gene sequence:

>723_bases
ATGCCACAGACCCCGGTCATCCCGCTGAACCCAGAAGTCATCGAAACACTCAAGCGCATCACCACCGCCACGCTGACCAC
GGTCCTGCTCAAAAAGGGCCTGCGCAATGTCTGGATGCGCGGCACGCGCCCTCTGCGCCCGGACCAGCCGCGCCAGGTGG
GGCGTGCCTTCACGCTGCGGTTTGTGCCGGCCCGTGAAGACTTGGCCACGCCGGCCTCGTGGGGCGCTCCGATTTCGACG
CGCGCGGCCATCGAGGCCATGCCCGAGGGCGTGGTTGCGGTGGTGGGCGCCCTCGGCGTGACCGATGCCGGCATCTTCGG
CGACATTCTCTGCGCCCGCATGCAAAAGCGCGGTGTGGCCGCGCTGGTGACCGATGGCGTGGTGCGCGACCTGTCGGGCG
TGCTGGACACCGGCTTGCCTGTCTGGTGCCAGGGCACGGCCGCCCCCGCGTCGGTGGCGGGACTCACGTTTGTCAACTGG
CAGGAGCCCGTGGGCTGCGGCGGTGTCGCAGTGTTCCCCAACGATGTGGTCGTTGTCGATACCGACGGCGCGGTGCTGAT
TCCGGCAGCGCTGGTCGACGAGGTGGTCGAAGCGGCGGTGGAGCATGAACGCCTCGAGGAGTGGATCATGCAGCAGGTGA
GCCAGGGCTCGCCGCTGCCCGGCCTGTACCCGCCGAACGAGGAAAACCGGGCACGCTATGACGCCTGGCGGCGCGGCGCC
TGA

Upstream 100 bases:

>100_bases
GAGTCATGGCGGGGGAGTGACGGCAGGAGCGTGACTCTGTGCGAGGTGCGCGCCGGGAATCCGGTGCATCATTGCTACAT
CTACCTCCATGGAGTTTCCA

Downstream 100 bases:

>100_bases
ACCACTGCGGGAACTGCCGTGTCGGCCGGGGCTGTAGCGTGGCTCAGCTGAACCACTTCTTCACGTCCACCGTTGACCGT
CGTCCAACACCCTCGTAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MPQTPVIPLNPEVIETLKRITTATLTTVLLKKGLRNVWMRGTRPLRPDQPRQVGRAFTLRFVPAREDLATPASWGAPIST
RAAIEAMPEGVVAVVGALGVTDAGIFGDILCARMQKRGVAALVTDGVVRDLSGVLDTGLPVWCQGTAAPASVAGLTFVNW
QEPVGCGGVAVFPNDVVVVDTDGAVLIPAALVDEVVEAAVEHERLEEWIMQQVSQGSPLPGLYPPNEENRARYDAWRRGA

Sequences:

>Translated_240_residues
MPQTPVIPLNPEVIETLKRITTATLTTVLLKKGLRNVWMRGTRPLRPDQPRQVGRAFTLRFVPAREDLATPASWGAPIST
RAAIEAMPEGVVAVVGALGVTDAGIFGDILCARMQKRGVAALVTDGVVRDLSGVLDTGLPVWCQGTAAPASVAGLTFVNW
QEPVGCGGVAVFPNDVVVVDTDGAVLIPAALVDEVVEAAVEHERLEEWIMQQVSQGSPLPGLYPPNEENRARYDAWRRGA
>Mature_239_residues
PQTPVIPLNPEVIETLKRITTATLTTVLLKKGLRNVWMRGTRPLRPDQPRQVGRAFTLRFVPAREDLATPASWGAPISTR
AAIEAMPEGVVAVVGALGVTDAGIFGDILCARMQKRGVAALVTDGVVRDLSGVLDTGLPVWCQGTAAPASVAGLTFVNWQ
EPVGCGGVAVFPNDVVVVDTDGAVLIPAALVDEVVEAAVEHERLEEWIMQQVSQGSPLPGLYPPNEENRARYDAWRRGA

Specific function: Unknown

COG id: COG0684

COG function: function code H; Demethylmenaquinone methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0644 in the C-terminal section [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019818
- InterPro:   IPR001804
- InterPro:   IPR005493 [H]

Pfam domain/function: PF00180 Iso_dh; PF03737 Methyltransf_6 [H]

EC number: NA

Molecular weight: Translated: 25647; Mature: 25516

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQTPVIPLNPEVIETLKRITTATLTTVLLKKGLRNVWMRGTRPLRPDQPRQVGRAFTLR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHEEEEE
FVPAREDLATPASWGAPISTRAAIEAMPEGVVAVVGALGVTDAGIFGDILCARMQKRGVA
EECCHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCH
ALVTDGVVRDLSGVLDTGLPVWCQGTAAPASVAGLTFVNWQEPVGCGGVAVFPNDVVVVD
HHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHCEEEECCCCCCCCCCEEECCCCEEEEE
TDGAVLIPAALVDEVVEAAVEHERLEEWIMQQVSQGSPLPGLYPPNEENRARYDAWRRGA
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure 
PQTPVIPLNPEVIETLKRITTATLTTVLLKKGLRNVWMRGTRPLRPDQPRQVGRAFTLR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHEEEEE
FVPAREDLATPASWGAPISTRAAIEAMPEGVVAVVGALGVTDAGIFGDILCARMQKRGVA
EECCHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCH
ALVTDGVVRDLSGVLDTGLPVWCQGTAAPASVAGLTFVNWQEPVGCGGVAVFPNDVVVVD
HHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHCEEEECCCCCCCCCCEEECCCCEEEEE
TDGAVLIPAALVDEVVEAAVEHERLEEWIMQQVSQGSPLPGLYPPNEENRARYDAWRRGA
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7891566 [H]