Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is cyoC [C]

Identifier: 91786630

GI number: 91786630

Start: 743944

End: 744552

Strand: Direct

Name: cyoC [C]

Synonym: Bpro_0728

Alternate gene names: 91786630

Gene position: 743944-744552 (Clockwise)

Preceding gene: 91786629

Following gene: 91786631

Centisome position: 14.31

GC content: 71.76

Gene sequence:

>609_bases
ATGAGTGCCGCCGTGGCATCTGGCGCCTGGCCGCCCGACCGCCGCGCCGCCAGCACGGGTACCGGCCTGTGGACGTTCAT
GGGTGTTGCCACCGCCTTGTTCACGCTGTTCATTCTTGCCTACGCGATGCGCATGGACAGCGGCGATTGGTCGCCGATTG
CGATGCCCTGGCAGTTGTGGCTTAGCACGGCGCTGCTGGTGGCCGGCAGCCTGCTGCTGCGGCGCGCCGCGGTGGCTGCG
CGGAGTGGCCATTGGGCCGCGGTCCGCATGCAACTGGGGGCGGGCGGCGCCTGCGCGCTGGCGTTTCTGGGTGTGCAACT
CTGGGCCTGGCAGGTGCTGCAAGCCGCGCAGGTGATGCCGGCCGGCAACCCGGCGGCCAGCTTCTTTTACCTGCTGACGG
CCATGCACGGGCTCCACGTGATCGGGGGCCTGGCCGGCTGGGCGGTGACGGCGCGTGGCGTGGGCCGCGTGGCCGGCCCG
GCCTTCGCCTGGCGCGTTGCGCTGTGCGCGCGCTACTGGCACTTCCTGCTGGGGGTGTGGGTGGTGCTGTTTGCGACGCT
CGGCTGGCTGACGCCGGAAGCCGTGCGCTGGATCTGCGGCACGGGCTGA

Upstream 100 bases:

>100_bases
GCGCGCCGCAGGACTTCATTGCACAAAACGCACCCCCCGAGGACGGCGGCCAGGAGCCTGAGCCGCACCCCCGCCCCGAC
AGAGCCACAGGAGCGATCGC

Downstream 100 bases:

>100_bases
CGGCCGGCATGAACTTCTGGAGGCTCCATGGACACCACGATACCAATGGCTTCACCCCCAAGCGCTGCCGTTAGCGCCGC
CAGCGCGGGAGTCGGCTGGC

Product: cytochrome c oxidase subunit III

Products: ferricytochrome c; H2O

Alternate protein names: Cytochrome Oxidase Subunit III Oxidase Polypeptide I; Cytochrome-C Oxidase Transmembrane Protein

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MSAAVASGAWPPDRRAASTGTGLWTFMGVATALFTLFILAYAMRMDSGDWSPIAMPWQLWLSTALLVAGSLLLRRAAVAA
RSGHWAAVRMQLGAGGACALAFLGVQLWAWQVLQAAQVMPAGNPAASFFYLLTAMHGLHVIGGLAGWAVTARGVGRVAGP
AFAWRVALCARYWHFLLGVWVVLFATLGWLTPEAVRWICGTG

Sequences:

>Translated_202_residues
MSAAVASGAWPPDRRAASTGTGLWTFMGVATALFTLFILAYAMRMDSGDWSPIAMPWQLWLSTALLVAGSLLLRRAAVAA
RSGHWAAVRMQLGAGGACALAFLGVQLWAWQVLQAAQVMPAGNPAASFFYLLTAMHGLHVIGGLAGWAVTARGVGRVAGP
AFAWRVALCARYWHFLLGVWVVLFATLGWLTPEAVRWICGTG
>Mature_201_residues
SAAVASGAWPPDRRAASTGTGLWTFMGVATALFTLFILAYAMRMDSGDWSPIAMPWQLWLSTALLVAGSLLLRRAAVAAR
SGHWAAVRMQLGAGGACALAFLGVQLWAWQVLQAAQVMPAGNPAASFFYLLTAMHGLHVIGGLAGWAVTARGVGRVAGPA
FAWRVALCARYWHFLLGVWVVLFATLGWLTPEAVRWICGTG

Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]

COG id: COG1845

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.9.3.1

Molecular weight: Translated: 21486; Mature: 21355

Theoretical pI: Translated: 11.51; Mature: 11.51

Prosite motif: PS50253 COX3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAVASGAWPPDRRAASTGTGLWTFMGVATALFTLFILAYAMRMDSGDWSPIAMPWQLW
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
LSTALLVAGSLLLRRAAVAARSGHWAAVRMQLGAGGACALAFLGVQLWAWQVLQAAQVMP
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC
AGNPAASFFYLLTAMHGLHVIGGLAGWAVTARGVGRVAGPAFAWRVALCARYWHFLLGVW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHH
VVLFATLGWLTPEAVRWICGTG
HHHHHHHHCCCHHHHHHHHCCC
>Mature Secondary Structure 
SAAVASGAWPPDRRAASTGTGLWTFMGVATALFTLFILAYAMRMDSGDWSPIAMPWQLW
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
LSTALLVAGSLLLRRAAVAARSGHWAAVRMQLGAGGACALAFLGVQLWAWQVLQAAQVMP
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC
AGNPAASFFYLLTAMHGLHVIGGLAGWAVTARGVGRVAGPAFAWRVALCARYWHFLLGVW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHH
VVLFATLGWLTPEAVRWICGTG
HHHHHHHHCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ferrocytochrome c; O2

Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA