| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is insH10 [H]
Identifier: 91786617
GI number: 91786617
Start: 726749
End: 727399
Strand: Reverse
Name: insH10 [H]
Synonym: Bpro_0714
Alternate gene names: 91786617
Gene position: 727399-726749 (Counterclockwise)
Preceding gene: 91786623
Following gene: 91786602
Centisome position: 13.99
GC content: 63.29
Gene sequence:
>651_bases ATGCCGATGAAACAACAACCCCTTGCCATGGCTGCCGATCAAGGATCGGGATTCGAACAACACCGCAAGCCCACGCGGCG AGACGAGTTCTTGAAGACCATGGAAGCCATCGTGCCGTGGGCAGCGCTGTGCGAAGTCATCGAGCCGCACTACCCCAAGG CCGGCAACGGCCGTCCGCCAATTGGCTTGGAGCGCATGCTGCGCATCCACTTCATCCAGCACTGGTTCAACCTGGCCGAT CTGGCCTGCGAGGAGGCCCTGTACGACAGCGCCAGCCTGCGCCGCTTCGTGGGCATCGATCTGGGCCGCGAGCCGGTGCC CGACGCCACCACCCTGCTGAAGTTTCGCCGCCTGCTGAACGACAACAAGCTCGGTGAGGCCCTGTTCGCCAAGGTGGGGC AAGAACTGCAGGCCCGAGGCTTCAAGCTCAACACCGGCACCATCGTGGACGCCACCATCATCGGCGCGCCCAGTTCGACC AAGAACGCGGACAGGGCGCGCGACCCCGAGATGCATCAAACCCGCAAGGGCCAGCAATGGTATTTCGGCATGAGATGTGG TCGACCACATCTCATGCCTAATGTGGCGTTGGTCCATATGTGGCGGCCGGCGGCGTCGCCCTCGGGAGGACCGTCGCTGA GTGGCACATAA
Upstream 100 bases:
>100_bases GGCCCCCGTTTCGGGCTTGGGGAAACCCTTATTTTGGGATAGGGGCTTCCCCTAGGGCAATGCTGAATAAGGTCCACGAT CACGCAGACTGAAGCGTTAC
Downstream 100 bases:
>100_bases ATTCCGGTCACAGCGATCTTAGGAACTCCATGATGTGCGGTTGGGAATGCCACCTCTTGCCTGACTTCTGGGCCGCGGAG ATCTCGCACTTCGCCAGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MPMKQQPLAMAADQGSGFEQHRKPTRRDEFLKTMEAIVPWAALCEVIEPHYPKAGNGRPPIGLERMLRIHFIQHWFNLAD LACEEALYDSASLRRFVGIDLGREPVPDATTLLKFRRLLNDNKLGEALFAKVGQELQARGFKLNTGTIVDATIIGAPSST KNADRARDPEMHQTRKGQQWYFGMRCGRPHLMPNVALVHMWRPAASPSGGPSLSGT
Sequences:
>Translated_216_residues MPMKQQPLAMAADQGSGFEQHRKPTRRDEFLKTMEAIVPWAALCEVIEPHYPKAGNGRPPIGLERMLRIHFIQHWFNLAD LACEEALYDSASLRRFVGIDLGREPVPDATTLLKFRRLLNDNKLGEALFAKVGQELQARGFKLNTGTIVDATIIGAPSST KNADRARDPEMHQTRKGQQWYFGMRCGRPHLMPNVALVHMWRPAASPSGGPSLSGT >Mature_215_residues PMKQQPLAMAADQGSGFEQHRKPTRRDEFLKTMEAIVPWAALCEVIEPHYPKAGNGRPPIGLERMLRIHFIQHWFNLADL ACEEALYDSASLRRFVGIDLGREPVPDATTLLKFRRLLNDNKLGEALFAKVGQELQARGFKLNTGTIVDATIIGAPSSTK NADRARDPEMHQTRKGQQWYFGMRCGRPHLMPNVALVHMWRPAASPSGGPSLSGT
Specific function: Involved in the transposition of the insertion sequence IS5 [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
Organism=Escherichia coli, GI1789921, Length=171, Percent_Identity=53.8011695906433, Blast_Score=193, Evalue=9e-51, Organism=Escherichia coli, GI1789612, Length=171, Percent_Identity=53.8011695906433, Blast_Score=193, Evalue=9e-51, Organism=Escherichia coli, GI1789355, Length=171, Percent_Identity=53.8011695906433, Blast_Score=193, Evalue=9e-51, Organism=Escherichia coli, GI1788518, Length=171, Percent_Identity=53.8011695906433, Blast_Score=193, Evalue=9e-51, Organism=Escherichia coli, GI1788342, Length=171, Percent_Identity=53.8011695906433, Blast_Score=193, Evalue=9e-51, Organism=Escherichia coli, GI1787592, Length=171, Percent_Identity=53.8011695906433, Blast_Score=193, Evalue=9e-51, Organism=Escherichia coli, GI1786877, Length=171, Percent_Identity=53.8011695906433, Blast_Score=193, Evalue=9e-51, Organism=Escherichia coli, GI1786764, Length=171, Percent_Identity=53.8011695906433, Blast_Score=193, Evalue=9e-51, Organism=Escherichia coli, GI1786453, Length=171, Percent_Identity=53.8011695906433, Blast_Score=193, Evalue=9e-51, Organism=Escherichia coli, GI1788303, Length=171, Percent_Identity=53.8011695906433, Blast_Score=192, Evalue=1e-50, Organism=Escherichia coli, GI1787634, Length=171, Percent_Identity=53.2163742690059, Blast_Score=191, Evalue=5e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002559 - InterPro: IPR008490 [H]
Pfam domain/function: PF05598 DUF772; PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 24125; Mature: 23994
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMKQQPLAMAADQGSGFEQHRKPTRRDEFLKTMEAIVPWAALCEVIEPHYPKAGNGRPP CCCCCCCHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCC IGLERMLRIHFIQHWFNLADLACEEALYDSASLRRFVGIDLGREPVPDATTLLKFRRLLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHC DNKLGEALFAKVGQELQARGFKLNTGTIVDATIIGAPSSTKNADRARDPEMHQTRKGQQW CCCHHHHHHHHHHHHHHHCCEECCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHCCCCCE YFGMRCGRPHLMPNVALVHMWRPAASPSGGPSLSGT EEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure PMKQQPLAMAADQGSGFEQHRKPTRRDEFLKTMEAIVPWAALCEVIEPHYPKAGNGRPP CCCCCCHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCC IGLERMLRIHFIQHWFNLADLACEEALYDSASLRRFVGIDLGREPVPDATTLLKFRRLLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHC DNKLGEALFAKVGQELQARGFKLNTGTIVDATIIGAPSSTKNADRARDPEMHQTRKGQQW CCCHHHHHHHHHHHHHHHCCEECCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHCCCCCE YFGMRCGRPHLMPNVALVHMWRPAASPSGGPSLSGT EEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041620; 9097039; 9097040; 9278503 [H]