| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786602
Identifier: 91786602
GI number: 91786602
Start: 710151
End: 711179
Strand: Reverse
Name: 91786602
Synonym: Bpro_0698
Alternate gene names: NA
Gene position: 711179-710151 (Counterclockwise)
Preceding gene: 91786617
Following gene: 91786601
Centisome position: 13.68
GC content: 66.18
Gene sequence:
>1029_bases ATGGCAGCCACCATCAACCAGATAGCGGAAGCTGCGGGCGTGAGCACCGCAACGGTCGATCGCGTGCTGAACAATCGGCC GGGCGTCAACCCGGCCACCGTGGACCGGGTCCGCACCGTGATGCAGGCGCTGGGCGCCGCCAGTCCAGTCCGCGGCCGCC CACGGTCCACGCCCAACTACCGGTTCGGGTTTGTGCTGCCCGCTTCGCGGCGCGGTTTTTTCGACATCATCGACCGCGTC GTCGCCCAGGCAGCCGGTGATTTCAGGCACCAGCACATCACTGAAATCACCCATCGCCTGCCGAACCAGGACGGCGCCGA CTTCGCTCAGGAACTGGCCAAGATGACCGATCTGGACGGCATCGCCCTCCTGGCCCCTGACGTGCCGCAGGTCAAGCTGG CCATCAATGAACTGGCGCGCAGCGGCGTGCATGTGGTCACCCTGTTTTCCGACGTCGCCGGTTCGCTACGCGAGACCTTC GTCGGCGCCGACAACCGCGCCGCCGGACGGACTGCGGGCATCCTGCTGGGCCGCTGCCTGCCGCACGGCGAGCCCGGGCG CTGCGCCATGCTGTCGCCGGCTACACGATTCGCCGCCGAGATCGACCGGCGCATCGGCTTTGCCCAGGTGCTGGAGGAGC GTTTTCCCAATGCCCGGCTGATCGAGCTGTCCGACATGCCGGAATCGGAAGATCAGGCCTACACATTTGCCCGGCAATTC CTCGATCCGGCTCAAACCGACGGGAAGCTGCACGCCCTGTACAACCTGGGCCCGGGCTCGCATGGCGTCAGCCGCGCCCT GCAGGAGTTGGGTTACGACAGCTCGCTGGGATTCGTGGTGCACGACCTGCTGGAGATGCACCGCTCGCTGCTGGTGGCCA ACGTCGTCTCTTATGTGCTGCAGCAGGACGTGTACTACGCCATCATGACCGCCGCCAAGGTACTGCGGCTGCTGTGCGAA GACGTGCGCGGCGCGCTGGCCGTGAGCAACCCCCGAATAGAAATCATCACGGCGGAGAACCTCGCGTGA
Upstream 100 bases:
>100_bases CTGCCTCTGCTGATCGAAATTGAGGTACATTCTTGGCAGGAAGGGCGACCGAAAGATTGATTTATTTGCCAATCACCTTG GCCGCAAACCCATCGATCCA
Downstream 100 bases:
>100_bases CAAAGCACGCCCGCGGTGACCATAATCGGCCCACTATCCACTACGAGCCGCGATGAAGAAATTCACCAACCTCCCGAGCG ACCTCGTGTTTGAAAGCATA
Product: LacI family transcription regulator
Products: NA
Alternate protein names: LacI Family Transcription Regulator; Regulatory Protein LacI; LacI Family Transcriptional Regulator; Transcriptional Regulator Protein; Transcriptional Regulator; Transcriptional Regulator Protein LacI Family; Transcriptional Regulator LacI Family Protein; Regulatory Protein LacI Family; LacI Regulatory Protein; LacI Family Regulatory Protein; Transcription Regulator Protein; HTH-Type Transcriptional Repressor PurR; HTH-Type Transcriptional Regulator MalR; Transcriptional Regulator Protein Laci-Family; ABC-Type Sugar Transport System Periplasmic Component; Sugar ABC Transporter Periplasmic Protein; Regulatory Protein; Laci-Related Transcriptional Regulator Protein; LacI Family Regulatory; HTH-Type Transcriptional Repressor Purr; Laci-Family Transcription Regulator; Transcriptional Regulatory Protein LacI Family; Transcription Regulator
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MAATINQIAEAAGVSTATVDRVLNNRPGVNPATVDRVRTVMQALGAASPVRGRPRSTPNYRFGFVLPASRRGFFDIIDRV VAQAAGDFRHQHITEITHRLPNQDGADFAQELAKMTDLDGIALLAPDVPQVKLAINELARSGVHVVTLFSDVAGSLRETF VGADNRAAGRTAGILLGRCLPHGEPGRCAMLSPATRFAAEIDRRIGFAQVLEERFPNARLIELSDMPESEDQAYTFARQF LDPAQTDGKLHALYNLGPGSHGVSRALQELGYDSSLGFVVHDLLEMHRSLLVANVVSYVLQQDVYYAIMTAAKVLRLLCE DVRGALAVSNPRIEIITAENLA
Sequences:
>Translated_342_residues MAATINQIAEAAGVSTATVDRVLNNRPGVNPATVDRVRTVMQALGAASPVRGRPRSTPNYRFGFVLPASRRGFFDIIDRV VAQAAGDFRHQHITEITHRLPNQDGADFAQELAKMTDLDGIALLAPDVPQVKLAINELARSGVHVVTLFSDVAGSLRETF VGADNRAAGRTAGILLGRCLPHGEPGRCAMLSPATRFAAEIDRRIGFAQVLEERFPNARLIELSDMPESEDQAYTFARQF LDPAQTDGKLHALYNLGPGSHGVSRALQELGYDSSLGFVVHDLLEMHRSLLVANVVSYVLQQDVYYAIMTAAKVLRLLCE DVRGALAVSNPRIEIITAENLA >Mature_341_residues AATINQIAEAAGVSTATVDRVLNNRPGVNPATVDRVRTVMQALGAASPVRGRPRSTPNYRFGFVLPASRRGFFDIIDRVV AQAAGDFRHQHITEITHRLPNQDGADFAQELAKMTDLDGIALLAPDVPQVKLAINELARSGVHVVTLFSDVAGSLRETFV GADNRAAGRTAGILLGRCLPHGEPGRCAMLSPATRFAAEIDRRIGFAQVLEERFPNARLIELSDMPESEDQAYTFARQFL DPAQTDGKLHALYNLGPGSHGVSRALQELGYDSSLGFVVHDLLEMHRSLLVANVVSYVLQQDVYYAIMTAAKVLRLLCED VRGALAVSNPRIEIITAENLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37104; Mature: 36973
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: PS50932 HTH_LACI_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATINQIAEAAGVSTATVDRVLNNRPGVNPATVDRVRTVMQALGAASPVRGRPRSTPNY CCCCHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE RFGFVLPASRRGFFDIIDRVVAQAAGDFRHQHITEITHRLPNQDGADFAQELAKMTDLDG EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC IALLAPDVPQVKLAINELARSGVHVVTLFSDVAGSLRETFVGADNRAAGRTAGILLGRCL EEEECCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC PHGEPGRCAMLSPATRFAAEIDRRIGFAQVLEERFPNARLIELSDMPESEDQAYTFARQF CCCCCCCEEEECHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHH LDPAQTDGKLHALYNLGPGSHGVSRALQELGYDSSLGFVVHDLLEMHRSLLVANVVSYVL CCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QQDVYYAIMTAAKVLRLLCEDVRGALAVSNPRIEIITAENLA HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCC >Mature Secondary Structure AATINQIAEAAGVSTATVDRVLNNRPGVNPATVDRVRTVMQALGAASPVRGRPRSTPNY CCCHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE RFGFVLPASRRGFFDIIDRVVAQAAGDFRHQHITEITHRLPNQDGADFAQELAKMTDLDG EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC IALLAPDVPQVKLAINELARSGVHVVTLFSDVAGSLRETFVGADNRAAGRTAGILLGRCL EEEECCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC PHGEPGRCAMLSPATRFAAEIDRRIGFAQVLEERFPNARLIELSDMPESEDQAYTFARQF CCCCCCCEEEECHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHH LDPAQTDGKLHALYNLGPGSHGVSRALQELGYDSSLGFVVHDLLEMHRSLLVANVVSYVL CCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QQDVYYAIMTAAKVLRLLCEDVRGALAVSNPRIEIITAENLA HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA