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The map label for this gene is pcaQ [H]

Identifier: 91786531

GI number: 91786531

Start: 633523

End: 634500

Strand: Reverse

Name: pcaQ [H]

Synonym: Bpro_0626

Alternate gene names: 91786531

Gene position: 634500-633523 (Counterclockwise)

Preceding gene: 91786535

Following gene: 91786529

Centisome position: 12.2

GC content: 70.35

Gene sequence:

>978_bases
ATGATTGATGAACGCATTAAATTCCGGCACCTGCAGTGCTTTCTGGCGGTGGCCCAGCATGGCAGTTTGCAGAAGGCGGC
GGGGGTGCTGTCGATCACGCAGCCGGCGGTCTCGAAAACGCTGAAAGAACTGGAGGCCCTGCTGGCGGTGCGCCTCTTTG
AGCGGGGCCGCCGTGGCGCGGTGCTGACGCGAAGCGGCGATGCCTTCGCGCGCCACGCCGGCGCCAGCGTGAGTGCGCTG
CGCGAAGCGGTGGCCAGCGTTGCGCCCACCCGCCCGCATGGCAGCGAAGTGGTGACACTGGGCGTGCTGCCGACGGTGGC
GCCGCAACTCATACCGGCGCTGCTACTGCAACTGGATGCGGGGAACGGCGCCAGCCGCCCGGCGGGCCTGGCGGACCTGG
CTATCAGCCTGCGCATTCATACCGCGCCGAATCCGGCCCTGCTCACGCAACTGCGCCAGCGCGAGCTGGATCTGGTGATT
GGCCGCTTTGCCGAGCCGGTCCACATGGTGGGCCTGACCTTTGAGCACCTGTATGCCGACCCGCTGGTGCTGGCCGTGCG
GCCCGATCACCCCCTGCTCCGGGACGCCGCCCTGAGTTCCGATGCGCTGGCGCACTTGCCGGCCTTCACCGCGATCCTGC
CCACGCTGGGCACGGCGATCCGACACACGGCCGACAGCTTTCTGCTGACGCGCGGCTTGGGCCCGCTGGTGCGCACGGTG
GAGACGCTGTCGGTGACCGGGGCGCGCAATTACACGGTACGCAGCGATGCGGTCTGGTTTGCGCCCCGGGGCGCGGTGCA
GCAGGACCTCGACAGCGGCCTGCTGGCGGCCCTGCCCGTGAGCATGGCGGGCACCGAGGAACTGGTCGGCATGAGCCTGC
GCGCCGACATGGCGCCCACCGTGGCCCAGGCGGAAGTGATTGGCGCCCTGCGCCTGCTGGCAGCGGCACACCGCGGCCTG
GACGCGGCCGCGGGGTAG

Upstream 100 bases:

>100_bases
GGGTCTCCTGTTCAAGTGATTGGGTGACTTTAGTCAATATCAATAGTTATGTATATTGATATTTATTGCACTTTTGCATA
ACCAATGGTTATAGTTAAGC

Downstream 100 bases:

>100_bases
GCGGGTCGGAAAGCCTGGGCTCAGGCCGACACGGCGGCGTCCGGCGGGGTCACGGGGGTCACCGCAAAACGCGCCGTCAG
CTCGTCCAGCCCCAGGGTCT

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: Pca operon transcriptional activator [H]

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MIDERIKFRHLQCFLAVAQHGSLQKAAGVLSITQPAVSKTLKELEALLAVRLFERGRRGAVLTRSGDAFARHAGASVSAL
REAVASVAPTRPHGSEVVTLGVLPTVAPQLIPALLLQLDAGNGASRPAGLADLAISLRIHTAPNPALLTQLRQRELDLVI
GRFAEPVHMVGLTFEHLYADPLVLAVRPDHPLLRDAALSSDALAHLPAFTAILPTLGTAIRHTADSFLLTRGLGPLVRTV
ETLSVTGARNYTVRSDAVWFAPRGAVQQDLDSGLLAALPVSMAGTEELVGMSLRADMAPTVAQAEVIGALRLLAAAHRGL
DAAAG

Sequences:

>Translated_325_residues
MIDERIKFRHLQCFLAVAQHGSLQKAAGVLSITQPAVSKTLKELEALLAVRLFERGRRGAVLTRSGDAFARHAGASVSAL
REAVASVAPTRPHGSEVVTLGVLPTVAPQLIPALLLQLDAGNGASRPAGLADLAISLRIHTAPNPALLTQLRQRELDLVI
GRFAEPVHMVGLTFEHLYADPLVLAVRPDHPLLRDAALSSDALAHLPAFTAILPTLGTAIRHTADSFLLTRGLGPLVRTV
ETLSVTGARNYTVRSDAVWFAPRGAVQQDLDSGLLAALPVSMAGTEELVGMSLRADMAPTVAQAEVIGALRLLAAAHRGL
DAAAG
>Mature_325_residues
MIDERIKFRHLQCFLAVAQHGSLQKAAGVLSITQPAVSKTLKELEALLAVRLFERGRRGAVLTRSGDAFARHAGASVSAL
REAVASVAPTRPHGSEVVTLGVLPTVAPQLIPALLLQLDAGNGASRPAGLADLAISLRIHTAPNPALLTQLRQRELDLVI
GRFAEPVHMVGLTFEHLYADPLVLAVRPDHPLLRDAALSSDALAHLPAFTAILPTLGTAIRHTADSFLLTRGLGPLVRTV
ETLSVTGARNYTVRSDAVWFAPRGAVQQDLDSGLLAALPVSMAGTEELVGMSLRADMAPTVAQAEVIGALRLLAAAHRGL
DAAAG

Specific function: Activates transcription of the pcaDCHGB operon for the catabolism of the phenolic compound protocatechuate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081904, Length=311, Percent_Identity=37.620578778135, Blast_Score=192, Evalue=2e-50,
Organism=Escherichia coli, GI1787601, Length=211, Percent_Identity=26.5402843601896, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI157672245, Length=243, Percent_Identity=32.5102880658436, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1788887, Length=198, Percent_Identity=28.2828282828283, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1790399, Length=190, Percent_Identity=28.4210526315789, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788297, Length=240, Percent_Identity=29.1666666666667, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR012787
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34188; Mature: 34188

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDERIKFRHLQCFLAVAQHGSLQKAAGVLSITQPAVSKTLKELEALLAVRLFERGRRGA
CCCCHHHHHHHHHHHHHHHCCCHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCE
VLTRSGDAFARHAGASVSALREAVASVAPTRPHGSEVVTLGVLPTVAPQLIPALLLQLDA
EEEECCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHEECC
GNGASRPAGLADLAISLRIHTAPNPALLTQLRQRELDLVIGRFAEPVHMVGLTFEHLYAD
CCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
PLVLAVRPDHPLLRDAALSSDALAHLPAFTAILPTLGTAIRHTADSFLLTRGLGPLVRTV
CEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ETLSVTGARNYTVRSDAVWFAPRGAVQQDLDSGLLAALPVSMAGTEELVGMSLRADMAPT
HHHEECCCCCEEEECCEEEECCCCHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHCCCCCH
VAQAEVIGALRLLAAAHRGLDAAAG
HHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MIDERIKFRHLQCFLAVAQHGSLQKAAGVLSITQPAVSKTLKELEALLAVRLFERGRRGA
CCCCHHHHHHHHHHHHHHHCCCHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCE
VLTRSGDAFARHAGASVSALREAVASVAPTRPHGSEVVTLGVLPTVAPQLIPALLLQLDA
EEEECCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHEECC
GNGASRPAGLADLAISLRIHTAPNPALLTQLRQRELDLVIGRFAEPVHMVGLTFEHLYAD
CCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
PLVLAVRPDHPLLRDAALSSDALAHLPAFTAILPTLGTAIRHTADSFLLTRGLGPLVRTV
CEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ETLSVTGARNYTVRSDAVWFAPRGAVQQDLDSGLLAALPVSMAGTEELVGMSLRADMAPT
HHHEECCCCCEEEECCEEEECCCCHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHCCCCCH
VAQAEVIGALRLLAAAHRGLDAAAG
HHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]