Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91786535

Identifier: 91786535

GI number: 91786535

Start: 636960

End: 638381

Strand: Reverse

Name: 91786535

Synonym: Bpro_0630

Alternate gene names: NA

Gene position: 638381-636960 (Counterclockwise)

Preceding gene: 91786536

Following gene: 91786531

Centisome position: 12.28

GC content: 66.95

Gene sequence:

>1422_bases
ATGAACGCGGCTCAATCGGCGCAATTGTCACAGTTGGCGCAGTTGGCCCCGGAACCCTGCCTCGCGGACATACGCCCCTG
TCTGGAGGGCGCCATCCCGGCCGTCATGGCCACCTGCGCGATGGACGGCACGCCCAACGTGGCCTATATCTCGCAGGTGT
TTTATGTGGACGAGCGCCACGTGGCGCTGTCTTTCCAGTTCTTCAACAAGACGCGAAAAAACATCCTGGCCAATCCTTAC
GCCACGGTGCTGGTGTTGCACCCGGTCACGGCGGCGTTTTTCCGCATGCACATCCGCTACCTGCGCACCGAAACCGAAGG
CCCGGTATTTGAGGGCATGAAGGCCCAGCTGGCCGGCATCGCGTCGCACAGCGGCATGGCGGGCGTGTTCAGGCTGCAGG
GCTCGGACATCTACGAAGTGCAGGCGATCGAGTGCATTGCCGGCGAGCCCCTGCCCGCCGCCCCACCGCGCGCCAGCATG
CTGACGGGGCTGCGCCGCGGCAGCGAGCGGCTGTCGCGCTGCACCGGGCTGGGGGAGCTGCTCAATGCCGCGCTGGCGAC
GCTGACCGACTTTGTGGGCATTCAGCATGCGATGGTGCTGATGCTGGATCCGGCCACCCAACGGCTCTACACCGTGGCCA
GCTGCGGTTATGCCACTTCGGGCGTGGGCTCGGAAATTGAAATGGGCCAGGGCGTGATTGGCGTGGCCGCGCGGGAACGC
ACTCCGGTTCGCATCGTGCACATGAGCAGCGCCTACGCCTACAACCGGGCCATTAAAACCAGCCTGGGCGCCAGCGCGCC
TGAGCTGATGCTGGAGACCGACATTCCCTACCCGGGCCTGGCCGAGCCGCACAGCCAGGTGGCGGTGCCCATCGTTTCTG
TTGGCCGGCTGCTGGGCGTGCTGTTTGCCGAGAGCCCGAACGACCTGCAGTTTGGCTTTGAAGAGGAGGACGCGCTGGTC
GCGCTGGCCGGCCATCTGGGGGCGGCCATCGACCTGATGCAGGCCGGCCCGGAGGCCGCCGAGCTGGCGGACGCCGCACC
GCCAGCGGCAGCGGTGAACAGGCAGGCTGAAGGCCCCGGCGCCAAGGCAGGTGGTGCGGCCCTGCAGTTGCGGCGCTTCA
CAAGCAACGACAGCGTGTTTGTCAACGACAGCTACCTGATCAAGGGCGTGGCGGGCGCGATCTTCTGGAAGCTGGTGACA
GACCATGTCCGGCAGGGCCGGACCGAGTTTTCCAACCGCGAGTTGCGGCTGGACCCCGCCATTCACCTGCCCGATGTGAC
AGACAACCTCGAAGCGCGCCTGCTGCTGCTGCAGCGCCGCCTGGCTGAGCGCGGCCCGCACATCCGCATCGAGAAAACCG
GGCGTGGCCGCTTCAGGCTGGCGGTGCAGCGTCCGCTGGTGCTGGCGGACGTGGCGGCCTGA

Upstream 100 bases:

>100_bases
ATGACCTGGTGGCCATCAGCTTTGAGCCGGCGCAGGCGTTTGACCAGACGCCCGGCCCCCAAGCCGGTGCGCCGCTGCCC
CATGGCCCCGGGAGCCCGTC

Downstream 100 bases:

>100_bases
ACCAGCCGCCCAGCTTCAGGCCTGAACCAGCCCCGGTACGGCCGGCAGGCCGAGGCCGCGGGTGAGCTTGGCCCATTCCT
GACCGCTCAGGTGCGGCCTG

Product: putative GAF sensor protein

Products: 3',5'-cyclic AMP; diphosphate

Alternate protein names: Phytochrome Sensor Protein; Adenylate/Guanylate Cyclase; Phosphoenolpyruvate-Protein Phosphotransferase; Adenylate Cyclase

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MNAAQSAQLSQLAQLAPEPCLADIRPCLEGAIPAVMATCAMDGTPNVAYISQVFYVDERHVALSFQFFNKTRKNILANPY
ATVLVLHPVTAAFFRMHIRYLRTETEGPVFEGMKAQLAGIASHSGMAGVFRLQGSDIYEVQAIECIAGEPLPAAPPRASM
LTGLRRGSERLSRCTGLGELLNAALATLTDFVGIQHAMVLMLDPATQRLYTVASCGYATSGVGSEIEMGQGVIGVAARER
TPVRIVHMSSAYAYNRAIKTSLGASAPELMLETDIPYPGLAEPHSQVAVPIVSVGRLLGVLFAESPNDLQFGFEEEDALV
ALAGHLGAAIDLMQAGPEAAELADAAPPAAAVNRQAEGPGAKAGGAALQLRRFTSNDSVFVNDSYLIKGVAGAIFWKLVT
DHVRQGRTEFSNRELRLDPAIHLPDVTDNLEARLLLLQRRLAERGPHIRIEKTGRGRFRLAVQRPLVLADVAA

Sequences:

>Translated_473_residues
MNAAQSAQLSQLAQLAPEPCLADIRPCLEGAIPAVMATCAMDGTPNVAYISQVFYVDERHVALSFQFFNKTRKNILANPY
ATVLVLHPVTAAFFRMHIRYLRTETEGPVFEGMKAQLAGIASHSGMAGVFRLQGSDIYEVQAIECIAGEPLPAAPPRASM
LTGLRRGSERLSRCTGLGELLNAALATLTDFVGIQHAMVLMLDPATQRLYTVASCGYATSGVGSEIEMGQGVIGVAARER
TPVRIVHMSSAYAYNRAIKTSLGASAPELMLETDIPYPGLAEPHSQVAVPIVSVGRLLGVLFAESPNDLQFGFEEEDALV
ALAGHLGAAIDLMQAGPEAAELADAAPPAAAVNRQAEGPGAKAGGAALQLRRFTSNDSVFVNDSYLIKGVAGAIFWKLVT
DHVRQGRTEFSNRELRLDPAIHLPDVTDNLEARLLLLQRRLAERGPHIRIEKTGRGRFRLAVQRPLVLADVAA
>Mature_473_residues
MNAAQSAQLSQLAQLAPEPCLADIRPCLEGAIPAVMATCAMDGTPNVAYISQVFYVDERHVALSFQFFNKTRKNILANPY
ATVLVLHPVTAAFFRMHIRYLRTETEGPVFEGMKAQLAGIASHSGMAGVFRLQGSDIYEVQAIECIAGEPLPAAPPRASM
LTGLRRGSERLSRCTGLGELLNAALATLTDFVGIQHAMVLMLDPATQRLYTVASCGYATSGVGSEIEMGQGVIGVAARER
TPVRIVHMSSAYAYNRAIKTSLGASAPELMLETDIPYPGLAEPHSQVAVPIVSVGRLLGVLFAESPNDLQFGFEEEDALV
ALAGHLGAAIDLMQAGPEAAELADAAPPAAAVNRQAEGPGAKAGGAALQLRRFTSNDSVFVNDSYLIKGVAGAIFWKLVT
DHVRQGRTEFSNRELRLDPAIHLPDVTDNLEARLLLLQRRLAERGPHIRIEKTGRGRFRLAVQRPLVLADVAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 4.6.1.1

Molecular weight: Translated: 50666; Mature: 50666

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAAQSAQLSQLAQLAPEPCLADIRPCLEGAIPAVMATCAMDGTPNVAYISQVFYVDERH
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEECCCE
VALSFQFFNKTRKNILANPYATVLVLHPVTAAFFRMHIRYLRTETEGPVFEGMKAQLAGI
EEEEEHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHH
ASHSGMAGVFRLQGSDIYEVQAIECIAGEPLPAAPPRASMLTGLRRGSERLSRCTGLGEL
HCCCCCCEEEEECCCCEEEEEEEHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LNAALATLTDFVGIQHAMVLMLDPATQRLYTVASCGYATSGVGSEIEMGQGVIGVAARER
HHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHCCCCCCCCCCCHHCCCCEEEEEECCC
TPVRIVHMSSAYAYNRAIKTSLGASAPELMLETDIPYPGLAEPHSQVAVPIVSVGRLLGV
CCEEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
LFAESPNDLQFGFEEEDALVALAGHLGAAIDLMQAGPEAAELADAAPPAAAVNRQAEGPG
HHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHCCCCCCCC
AKAGGAALQLRRFTSNDSVFVNDSYLIKGVAGAIFWKLVTDHVRQGRTEFSNRELRLDPA
CCCCCCEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEECCC
IHLPDVTDNLEARLLLLQRRLAERGPHIRIEKTGRGRFRLAVQRPLVLADVAA
EECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEECCEEEEECCC
>Mature Secondary Structure
MNAAQSAQLSQLAQLAPEPCLADIRPCLEGAIPAVMATCAMDGTPNVAYISQVFYVDERH
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEECCCE
VALSFQFFNKTRKNILANPYATVLVLHPVTAAFFRMHIRYLRTETEGPVFEGMKAQLAGI
EEEEEHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHH
ASHSGMAGVFRLQGSDIYEVQAIECIAGEPLPAAPPRASMLTGLRRGSERLSRCTGLGEL
HCCCCCCEEEEECCCCEEEEEEEHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LNAALATLTDFVGIQHAMVLMLDPATQRLYTVASCGYATSGVGSEIEMGQGVIGVAARER
HHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHCCCCCCCCCCCHHCCCCEEEEEECCC
TPVRIVHMSSAYAYNRAIKTSLGASAPELMLETDIPYPGLAEPHSQVAVPIVSVGRLLGV
CCEEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
LFAESPNDLQFGFEEEDALVALAGHLGAAIDLMQAGPEAAELADAAPPAAAVNRQAEGPG
HHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHCCCCCCCC
AKAGGAALQLRRFTSNDSVFVNDSYLIKGVAGAIFWKLVTDHVRQGRTEFSNRELRLDPA
CCCCCCEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEECCC
IHLPDVTDNLEARLLLLQRRLAERGPHIRIEKTGRGRFRLAVQRPLVLADVAA
EECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEECCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP

Specific reaction: ATP = 3',5'-cyclic AMP + diphosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA