| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786535
Identifier: 91786535
GI number: 91786535
Start: 636960
End: 638381
Strand: Reverse
Name: 91786535
Synonym: Bpro_0630
Alternate gene names: NA
Gene position: 638381-636960 (Counterclockwise)
Preceding gene: 91786536
Following gene: 91786531
Centisome position: 12.28
GC content: 66.95
Gene sequence:
>1422_bases ATGAACGCGGCTCAATCGGCGCAATTGTCACAGTTGGCGCAGTTGGCCCCGGAACCCTGCCTCGCGGACATACGCCCCTG TCTGGAGGGCGCCATCCCGGCCGTCATGGCCACCTGCGCGATGGACGGCACGCCCAACGTGGCCTATATCTCGCAGGTGT TTTATGTGGACGAGCGCCACGTGGCGCTGTCTTTCCAGTTCTTCAACAAGACGCGAAAAAACATCCTGGCCAATCCTTAC GCCACGGTGCTGGTGTTGCACCCGGTCACGGCGGCGTTTTTCCGCATGCACATCCGCTACCTGCGCACCGAAACCGAAGG CCCGGTATTTGAGGGCATGAAGGCCCAGCTGGCCGGCATCGCGTCGCACAGCGGCATGGCGGGCGTGTTCAGGCTGCAGG GCTCGGACATCTACGAAGTGCAGGCGATCGAGTGCATTGCCGGCGAGCCCCTGCCCGCCGCCCCACCGCGCGCCAGCATG CTGACGGGGCTGCGCCGCGGCAGCGAGCGGCTGTCGCGCTGCACCGGGCTGGGGGAGCTGCTCAATGCCGCGCTGGCGAC GCTGACCGACTTTGTGGGCATTCAGCATGCGATGGTGCTGATGCTGGATCCGGCCACCCAACGGCTCTACACCGTGGCCA GCTGCGGTTATGCCACTTCGGGCGTGGGCTCGGAAATTGAAATGGGCCAGGGCGTGATTGGCGTGGCCGCGCGGGAACGC ACTCCGGTTCGCATCGTGCACATGAGCAGCGCCTACGCCTACAACCGGGCCATTAAAACCAGCCTGGGCGCCAGCGCGCC TGAGCTGATGCTGGAGACCGACATTCCCTACCCGGGCCTGGCCGAGCCGCACAGCCAGGTGGCGGTGCCCATCGTTTCTG TTGGCCGGCTGCTGGGCGTGCTGTTTGCCGAGAGCCCGAACGACCTGCAGTTTGGCTTTGAAGAGGAGGACGCGCTGGTC GCGCTGGCCGGCCATCTGGGGGCGGCCATCGACCTGATGCAGGCCGGCCCGGAGGCCGCCGAGCTGGCGGACGCCGCACC GCCAGCGGCAGCGGTGAACAGGCAGGCTGAAGGCCCCGGCGCCAAGGCAGGTGGTGCGGCCCTGCAGTTGCGGCGCTTCA CAAGCAACGACAGCGTGTTTGTCAACGACAGCTACCTGATCAAGGGCGTGGCGGGCGCGATCTTCTGGAAGCTGGTGACA GACCATGTCCGGCAGGGCCGGACCGAGTTTTCCAACCGCGAGTTGCGGCTGGACCCCGCCATTCACCTGCCCGATGTGAC AGACAACCTCGAAGCGCGCCTGCTGCTGCTGCAGCGCCGCCTGGCTGAGCGCGGCCCGCACATCCGCATCGAGAAAACCG GGCGTGGCCGCTTCAGGCTGGCGGTGCAGCGTCCGCTGGTGCTGGCGGACGTGGCGGCCTGA
Upstream 100 bases:
>100_bases ATGACCTGGTGGCCATCAGCTTTGAGCCGGCGCAGGCGTTTGACCAGACGCCCGGCCCCCAAGCCGGTGCGCCGCTGCCC CATGGCCCCGGGAGCCCGTC
Downstream 100 bases:
>100_bases ACCAGCCGCCCAGCTTCAGGCCTGAACCAGCCCCGGTACGGCCGGCAGGCCGAGGCCGCGGGTGAGCTTGGCCCATTCCT GACCGCTCAGGTGCGGCCTG
Product: putative GAF sensor protein
Products: 3',5'-cyclic AMP; diphosphate
Alternate protein names: Phytochrome Sensor Protein; Adenylate/Guanylate Cyclase; Phosphoenolpyruvate-Protein Phosphotransferase; Adenylate Cyclase
Number of amino acids: Translated: 473; Mature: 473
Protein sequence:
>473_residues MNAAQSAQLSQLAQLAPEPCLADIRPCLEGAIPAVMATCAMDGTPNVAYISQVFYVDERHVALSFQFFNKTRKNILANPY ATVLVLHPVTAAFFRMHIRYLRTETEGPVFEGMKAQLAGIASHSGMAGVFRLQGSDIYEVQAIECIAGEPLPAAPPRASM LTGLRRGSERLSRCTGLGELLNAALATLTDFVGIQHAMVLMLDPATQRLYTVASCGYATSGVGSEIEMGQGVIGVAARER TPVRIVHMSSAYAYNRAIKTSLGASAPELMLETDIPYPGLAEPHSQVAVPIVSVGRLLGVLFAESPNDLQFGFEEEDALV ALAGHLGAAIDLMQAGPEAAELADAAPPAAAVNRQAEGPGAKAGGAALQLRRFTSNDSVFVNDSYLIKGVAGAIFWKLVT DHVRQGRTEFSNRELRLDPAIHLPDVTDNLEARLLLLQRRLAERGPHIRIEKTGRGRFRLAVQRPLVLADVAA
Sequences:
>Translated_473_residues MNAAQSAQLSQLAQLAPEPCLADIRPCLEGAIPAVMATCAMDGTPNVAYISQVFYVDERHVALSFQFFNKTRKNILANPY ATVLVLHPVTAAFFRMHIRYLRTETEGPVFEGMKAQLAGIASHSGMAGVFRLQGSDIYEVQAIECIAGEPLPAAPPRASM LTGLRRGSERLSRCTGLGELLNAALATLTDFVGIQHAMVLMLDPATQRLYTVASCGYATSGVGSEIEMGQGVIGVAARER TPVRIVHMSSAYAYNRAIKTSLGASAPELMLETDIPYPGLAEPHSQVAVPIVSVGRLLGVLFAESPNDLQFGFEEEDALV ALAGHLGAAIDLMQAGPEAAELADAAPPAAAVNRQAEGPGAKAGGAALQLRRFTSNDSVFVNDSYLIKGVAGAIFWKLVT DHVRQGRTEFSNRELRLDPAIHLPDVTDNLEARLLLLQRRLAERGPHIRIEKTGRGRFRLAVQRPLVLADVAA >Mature_473_residues MNAAQSAQLSQLAQLAPEPCLADIRPCLEGAIPAVMATCAMDGTPNVAYISQVFYVDERHVALSFQFFNKTRKNILANPY ATVLVLHPVTAAFFRMHIRYLRTETEGPVFEGMKAQLAGIASHSGMAGVFRLQGSDIYEVQAIECIAGEPLPAAPPRASM LTGLRRGSERLSRCTGLGELLNAALATLTDFVGIQHAMVLMLDPATQRLYTVASCGYATSGVGSEIEMGQGVIGVAARER TPVRIVHMSSAYAYNRAIKTSLGASAPELMLETDIPYPGLAEPHSQVAVPIVSVGRLLGVLFAESPNDLQFGFEEEDALV ALAGHLGAAIDLMQAGPEAAELADAAPPAAAVNRQAEGPGAKAGGAALQLRRFTSNDSVFVNDSYLIKGVAGAIFWKLVT DHVRQGRTEFSNRELRLDPAIHLPDVTDNLEARLLLLQRRLAERGPHIRIEKTGRGRFRLAVQRPLVLADVAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.6.1.1
Molecular weight: Translated: 50666; Mature: 50666
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAAQSAQLSQLAQLAPEPCLADIRPCLEGAIPAVMATCAMDGTPNVAYISQVFYVDERH CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEECCCE VALSFQFFNKTRKNILANPYATVLVLHPVTAAFFRMHIRYLRTETEGPVFEGMKAQLAGI EEEEEHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHH ASHSGMAGVFRLQGSDIYEVQAIECIAGEPLPAAPPRASMLTGLRRGSERLSRCTGLGEL HCCCCCCEEEEECCCCEEEEEEEHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LNAALATLTDFVGIQHAMVLMLDPATQRLYTVASCGYATSGVGSEIEMGQGVIGVAARER HHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHCCCCCCCCCCCHHCCCCEEEEEECCC TPVRIVHMSSAYAYNRAIKTSLGASAPELMLETDIPYPGLAEPHSQVAVPIVSVGRLLGV CCEEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH LFAESPNDLQFGFEEEDALVALAGHLGAAIDLMQAGPEAAELADAAPPAAAVNRQAEGPG HHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHCCCCCCCC AKAGGAALQLRRFTSNDSVFVNDSYLIKGVAGAIFWKLVTDHVRQGRTEFSNRELRLDPA CCCCCCEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEECCC IHLPDVTDNLEARLLLLQRRLAERGPHIRIEKTGRGRFRLAVQRPLVLADVAA EECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEECCEEEEECCC >Mature Secondary Structure MNAAQSAQLSQLAQLAPEPCLADIRPCLEGAIPAVMATCAMDGTPNVAYISQVFYVDERH CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEECCCE VALSFQFFNKTRKNILANPYATVLVLHPVTAAFFRMHIRYLRTETEGPVFEGMKAQLAGI EEEEEHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHH ASHSGMAGVFRLQGSDIYEVQAIECIAGEPLPAAPPRASMLTGLRRGSERLSRCTGLGEL HCCCCCCEEEEECCCCEEEEEEEHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LNAALATLTDFVGIQHAMVLMLDPATQRLYTVASCGYATSGVGSEIEMGQGVIGVAARER HHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHCCCCCCCCCCCHHCCCCEEEEEECCC TPVRIVHMSSAYAYNRAIKTSLGASAPELMLETDIPYPGLAEPHSQVAVPIVSVGRLLGV CCEEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH LFAESPNDLQFGFEEEDALVALAGHLGAAIDLMQAGPEAAELADAAPPAAAVNRQAEGPG HHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHCCCCCCCC AKAGGAALQLRRFTSNDSVFVNDSYLIKGVAGAIFWKLVTDHVRQGRTEFSNRELRLDPA CCCCCCEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEECCC IHLPDVTDNLEARLLLLQRRLAERGPHIRIEKTGRGRFRLAVQRPLVLADVAA EECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEECCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP
Specific reaction: ATP = 3',5'-cyclic AMP + diphosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA