| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786506
Identifier: 91786506
GI number: 91786506
Start: 605815
End: 607149
Strand: Reverse
Name: 91786506
Synonym: Bpro_0600
Alternate gene names: NA
Gene position: 607149-605815 (Counterclockwise)
Preceding gene: 91786507
Following gene: 91786505
Centisome position: 11.68
GC content: 62.62
Gene sequence:
>1335_bases ATGAAGGTTCGCAATTTGATTCTCGCCGTTGCGGCAGTGGCTGCCGGCGCTTCGTCCCTGGTGTCCACCGGCGCGTTGGC CCAGGCCAAAGAGCAGTTCATTCCGGTGCTGTCATACCGGACCGGACCTTACGCGCCCAACGGCGCGCCCTGGGCCAACG GCTATGTCGACTACCTCAAGCTGGTCAACGCCCGTGGCGGCCTCAATGGCGTCAAACTCTCGTTTGAAGAGTGCGAAACC GGCTATGACACGGCCCGCAGCGTGGAATGCTATGAGCGCCTGAAAGGCAAAAACGGTGGCGCTGCCCTGGTACAGCCCCT GTCTACGGGCGCCACCTTTGCCATCACCGAAAAGGCACCGGCAGACAAGATCTCGGTCGTCACCGTCGGCTATGGCCGCA GTGAAAGCGCCGATGGCACCACCTTCAAGTGGAACTTCCCGCTCGCCGGCACCTACTGGGTGGCATCCGACACCATTCTG CAAGCGATTGGAAAAAAAGAAGGTGGCCTTGACAAACTCAAGGGCAAAAAAATCGCGCTGGTCTACCACGACAGCCCGTA TGGCAAGGAGCCCATCGCCCTGCTGCAGGAACGCAGCAGACAGCTCGGCTTTGACCTGCAACTGCTGCCCGTGACGGCAC CCGGCGTAGAGCAAAAAGCCACCTGGCTGCAAATCCGCCAGGCCCGGCCTGACTACACCTTGCTATGGGGCTGGGGCGTG ATGAACTCCACCGCCATCAAGGAAGCGCAAGCGACCGGTTATGCGCGCGAGAAGATGTACGGCGTGTGGTGGGCCGGCGC CGAACCCGATGTAAAAGACGTCGCCGATGGCGCCAAGGGCTACAACGCCGTGACCTTGCAGCACGGGGCCGAACCCCAGT CCAAGGTGGTCAAGGACATGCTGGCCATGGTGCATGGAAAAGGCCAGGGCACCGGACCGAAAGACGAAGTCGGCCAGGTG CTCTACATGCGCGGCGCCATGAGCGCCATGCTGGGCGTGGAAGGCATACGCGCCGCCCAGGACCGCTTCGGCAAAGGCAA GGTCATGACCGGCGAGCAGGTCCGCTGGGGCCTGGAAAACCTCAACCTGACCCAGGCCAAGCTGGACGCGCTGGGCTTTG CCGGCGTGATGCGCCCGATCAGCACCTCGTGCACCGACCACATGGGTGCCGCCTGGGCACGCATCCACACCTGGGACGGC AAGCAGTGGAAATTCACCTCCGACTGGCTGCAGGCCGATGAGCAGATCATCAAGCCGCTGGTCAAATCCACCGCCGCCAG ATATGCAGCCGAGAAGAAGCTGACGCCGCGCACCCCGGCTGATTGTCAGTCCTGA
Upstream 100 bases:
>100_bases TTGGGGGCTACCCATGAAACGAGCGCATTTTTTTGGTAATTGATCACTTGTCGGGATATCAGTTTTCGGGTGCTTTGCTT TTAATTATTAGGAGACAACA
Downstream 100 bases:
>100_bases TGTAAGCCTGTCATGTCGGGTTTCAGGTGTCATGCCGGACCTGATCCGGCATCCATGGTGGCGTGCAGGAGCGCTGTCAT GGATTGCGGATCGGGTCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MKVRNLILAVAAVAAGASSLVSTGALAQAKEQFIPVLSYRTGPYAPNGAPWANGYVDYLKLVNARGGLNGVKLSFEECET GYDTARSVECYERLKGKNGGAALVQPLSTGATFAITEKAPADKISVVTVGYGRSESADGTTFKWNFPLAGTYWVASDTIL QAIGKKEGGLDKLKGKKIALVYHDSPYGKEPIALLQERSRQLGFDLQLLPVTAPGVEQKATWLQIRQARPDYTLLWGWGV MNSTAIKEAQATGYAREKMYGVWWAGAEPDVKDVADGAKGYNAVTLQHGAEPQSKVVKDMLAMVHGKGQGTGPKDEVGQV LYMRGAMSAMLGVEGIRAAQDRFGKGKVMTGEQVRWGLENLNLTQAKLDALGFAGVMRPISTSCTDHMGAAWARIHTWDG KQWKFTSDWLQADEQIIKPLVKSTAARYAAEKKLTPRTPADCQS
Sequences:
>Translated_444_residues MKVRNLILAVAAVAAGASSLVSTGALAQAKEQFIPVLSYRTGPYAPNGAPWANGYVDYLKLVNARGGLNGVKLSFEECET GYDTARSVECYERLKGKNGGAALVQPLSTGATFAITEKAPADKISVVTVGYGRSESADGTTFKWNFPLAGTYWVASDTIL QAIGKKEGGLDKLKGKKIALVYHDSPYGKEPIALLQERSRQLGFDLQLLPVTAPGVEQKATWLQIRQARPDYTLLWGWGV MNSTAIKEAQATGYAREKMYGVWWAGAEPDVKDVADGAKGYNAVTLQHGAEPQSKVVKDMLAMVHGKGQGTGPKDEVGQV LYMRGAMSAMLGVEGIRAAQDRFGKGKVMTGEQVRWGLENLNLTQAKLDALGFAGVMRPISTSCTDHMGAAWARIHTWDG KQWKFTSDWLQADEQIIKPLVKSTAARYAAEKKLTPRTPADCQS >Mature_444_residues MKVRNLILAVAAVAAGASSLVSTGALAQAKEQFIPVLSYRTGPYAPNGAPWANGYVDYLKLVNARGGLNGVKLSFEECET GYDTARSVECYERLKGKNGGAALVQPLSTGATFAITEKAPADKISVVTVGYGRSESADGTTFKWNFPLAGTYWVASDTIL QAIGKKEGGLDKLKGKKIALVYHDSPYGKEPIALLQERSRQLGFDLQLLPVTAPGVEQKATWLQIRQARPDYTLLWGWGV MNSTAIKEAQATGYAREKMYGVWWAGAEPDVKDVADGAKGYNAVTLQHGAEPQSKVVKDMLAMVHGKGQGTGPKDEVGQV LYMRGAMSAMLGVEGIRAAQDRFGKGKVMTGEQVRWGLENLNLTQAKLDALGFAGVMRPISTSCTDHMGAAWARIHTWDG KQWKFTSDWLQADEQIIKPLVKSTAARYAAEKKLTPRTPADCQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47966; Mature: 47966
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVRNLILAVAAVAAGASSLVSTGALAQAKEQFIPVLSYRTGPYAPNGAPWANGYVDYLK CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHH LVNARGGLNGVKLSFEECETGYDTARSVECYERLKGKNGGAALVQPLSTGATFAITEKAP HHHCCCCCCCEEEEHHHHCCCCCHHHHHHHHHHHCCCCCCHHEEEECCCCCEEEEECCCC ADKISVVTVGYGRSESADGTTFKWNFPLAGTYWVASDTILQAIGKKEGGLDKLKGKKIAL CCCEEEEEEECCCCCCCCCCEEEEECCCCEEEEEHHHHHHHHHCCCCCCHHHHCCCEEEE VYHDSPYGKEPIALLQERSRQLGFDLQLLPVTAPGVEQKATWLQIRQARPDYTLLWGWGV EEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCC MNSTAIKEAQATGYAREKMYGVWWAGAEPDVKDVADGAKGYNAVTLQHGAEPQSKVVKDM CCCHHHHHHHHCCHHHHHEEEEEECCCCCCHHHHHCCCCCCCEEEEECCCCHHHHHHHHH LAMVHGKGQGTGPKDEVGQVLYMRGAMSAMLGVEGIRAAQDRFGKGKVMTGEQVRWGLEN HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCC LNLTQAKLDALGFAGVMRPISTSCTDHMGAAWARIHTWDGKQWKFTSDWLQADEQIIKPL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECHHHHHHHHHHHHHH VKSTAARYAAEKKLTPRTPADCQS HHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKVRNLILAVAAVAAGASSLVSTGALAQAKEQFIPVLSYRTGPYAPNGAPWANGYVDYLK CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHH LVNARGGLNGVKLSFEECETGYDTARSVECYERLKGKNGGAALVQPLSTGATFAITEKAP HHHCCCCCCCEEEEHHHHCCCCCHHHHHHHHHHHCCCCCCHHEEEECCCCCEEEEECCCC ADKISVVTVGYGRSESADGTTFKWNFPLAGTYWVASDTILQAIGKKEGGLDKLKGKKIAL CCCEEEEEEECCCCCCCCCCEEEEECCCCEEEEEHHHHHHHHHCCCCCCHHHHCCCEEEE VYHDSPYGKEPIALLQERSRQLGFDLQLLPVTAPGVEQKATWLQIRQARPDYTLLWGWGV EEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCC MNSTAIKEAQATGYAREKMYGVWWAGAEPDVKDVADGAKGYNAVTLQHGAEPQSKVVKDM CCCHHHHHHHHCCHHHHHEEEEEECCCCCCHHHHHCCCCCCCEEEEECCCCHHHHHHHHH LAMVHGKGQGTGPKDEVGQVLYMRGAMSAMLGVEGIRAAQDRFGKGKVMTGEQVRWGLEN HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCC LNLTQAKLDALGFAGVMRPISTSCTDHMGAAWARIHTWDGKQWKFTSDWLQADEQIIKPL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECHHHHHHHHHHHHHH VKSTAARYAAEKKLTPRTPADCQS HHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA