| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is braE [H]
Identifier: 91786507
GI number: 91786507
Start: 607262
End: 608338
Strand: Reverse
Name: braE [H]
Synonym: Bpro_0601
Alternate gene names: 91786507
Gene position: 608338-607262 (Counterclockwise)
Preceding gene: 91786508
Following gene: 91786506
Centisome position: 11.7
GC content: 60.82
Gene sequence:
>1077_bases ATGCTTTACAGAGAAAACGGCCAATTCAAGACAACGTATCGGGCAGACCAGCAGATCTTCCCGATCGCACAGGACAGGCT GGTGGTAGCCCTGTTTCTGCTGTTTGCCTTTATCGCCGTACCCATGCTGGCCAGCGACTATCTGTTTCGCGCCATCCTGA TTCCCTTTTTGATCATCTCGCTGGCCGCGCTGGGCGTGAACATCCTGGTGGGCTATTGCGGCCAGATCTCGCTGGGCTCG GGTGCCTTCATGGCGGTAGGGGCTTACGGCGCCTACAACTTCTTTGTGCGCCTGCCCGGCCTGCCGCTGATCCCGGCCCT GATTCTGGGCGGACTGTGTGCCACCTTCTTCGGCATCCTGTTCGGCCTGCCCAGCCTGCGGGTCAAGGGTCTGTACCTGG CCGTGGCAACGCTGGCCGCGCAGTTCTTCGCCGACTGGATGTTCCTGCGCATCAAGTGGTTCACGCTGGACTCCCCTTCT GGCTCCGTCTCGGTGTCCAACCTGCAGGTGTTCGGGTTTCCGATCGAGAGCGCGCACAGCAAATACTGGCTCTGCCTGTC CATCCTGGTGGTGATGGCGCTGCTGGCCAAAAACCTGGTGCGCGGCGCCATTGGCCGGGAATGGATGGCGATTCGCGACA TGGACGTGGCCGCTGCCGTGATCGGCATCCGGCCCATGTACGCCAAGCTCAGCGCCTTTGCGGTCAGCTCGTTCATCGTC GGCATGTCGGGCGCGCTCTGGGGCTTTGTTTACCTCGGCGCATGGGAGCCGGCGGCATTCTCGGTGGACCAGTCATTCCG GCTGCTGTTCATGGTGATCATTGGCGGCATGGGCTCCATCCTGGGGGGCTTTCTGGGTGCGGCCTTCATCACCGTCTTGC CGATCGCGCTGAATCAGTTCCTGCCGGTACTCGCACAGCTGCTTGGATTTGAAATCTCAACCGCAGGCATTTCCCATGCC GAGCTGATGATTTTTGGCGGCCTGATTGTCTGGTTCCTGATCGTGGAGCCGCACGGCCTGGCCAAGCTCTGGTCGATCGG CAAACAGAAGTTGCGGCTCTGGCCGTTTCCTCATTAG
Upstream 100 bases:
>100_bases CTGCCCCCCGGGGGGGGCTGGCCTTGCTTGGGGCGGCCCGGCGCGGCGGCCGTCCCAGCTCATCACTTCTTTCATCGCGA TCTAACGGTGGCGCACTAAT
Downstream 100 bases:
>100_bases GACCAGGGTTGATTGGGGGCTACCCATGAAACGAGCGCATTTTTTTGGTAATTGATCACTTGTCGGGATATCAGTTTTCG GGTGCTTTGCTTTTAATTAT
Product: inner-membrane translocator
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MLYRENGQFKTTYRADQQIFPIAQDRLVVALFLLFAFIAVPMLASDYLFRAILIPFLIISLAALGVNILVGYCGQISLGS GAFMAVGAYGAYNFFVRLPGLPLIPALILGGLCATFFGILFGLPSLRVKGLYLAVATLAAQFFADWMFLRIKWFTLDSPS GSVSVSNLQVFGFPIESAHSKYWLCLSILVVMALLAKNLVRGAIGREWMAIRDMDVAAAVIGIRPMYAKLSAFAVSSFIV GMSGALWGFVYLGAWEPAAFSVDQSFRLLFMVIIGGMGSILGGFLGAAFITVLPIALNQFLPVLAQLLGFEISTAGISHA ELMIFGGLIVWFLIVEPHGLAKLWSIGKQKLRLWPFPH
Sequences:
>Translated_358_residues MLYRENGQFKTTYRADQQIFPIAQDRLVVALFLLFAFIAVPMLASDYLFRAILIPFLIISLAALGVNILVGYCGQISLGS GAFMAVGAYGAYNFFVRLPGLPLIPALILGGLCATFFGILFGLPSLRVKGLYLAVATLAAQFFADWMFLRIKWFTLDSPS GSVSVSNLQVFGFPIESAHSKYWLCLSILVVMALLAKNLVRGAIGREWMAIRDMDVAAAVIGIRPMYAKLSAFAVSSFIV GMSGALWGFVYLGAWEPAAFSVDQSFRLLFMVIIGGMGSILGGFLGAAFITVLPIALNQFLPVLAQLLGFEISTAGISHA ELMIFGGLIVWFLIVEPHGLAKLWSIGKQKLRLWPFPH >Mature_358_residues MLYRENGQFKTTYRADQQIFPIAQDRLVVALFLLFAFIAVPMLASDYLFRAILIPFLIISLAALGVNILVGYCGQISLGS GAFMAVGAYGAYNFFVRLPGLPLIPALILGGLCATFFGILFGLPSLRVKGLYLAVATLAAQFFADWMFLRIKWFTLDSPS GSVSVSNLQVFGFPIESAHSKYWLCLSILVVMALLAKNLVRGAIGREWMAIRDMDVAAAVIGIRPMYAKLSAFAVSSFIV GMSGALWGFVYLGAWEPAAFSVDQSFRLLFMVIIGGMGSILGGFLGAAFITVLPIALNQFLPVLAQLLGFEISTAGISHA ELMIFGGLIVWFLIVEPHGLAKLWSIGKQKLRLWPFPH
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG4177
COG function: function code E; ABC-type branched-chain amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789865, Length=304, Percent_Identity=27.9605263157895, Blast_Score=90, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR021807 [H]
Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]
EC number: NA
Molecular weight: Translated: 39013; Mature: 39013
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYRENGQFKTTYRADQQIFPIAQDRLVVALFLLFAFIAVPMLASDYLFRAILIPFLIIS CCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAALGVNILVGYCGQISLGSGAFMAVGAYGAYNFFVRLPGLPLIPALILGGLCATFFGIL HHHHHHHHHHHHCCCEECCCCCEEEEECCHHEEEEEECCCCCHHHHHHHHHHHHHHHHHH FGLPSLRVKGLYLAVATLAAQFFADWMFLRIKWFTLDSPSGSVSVSNLQVFGFPIESAHS HCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCEEEEEEEEEECCHHHCCC KYWLCLSILVVMALLAKNLVRGAIGREWMAIRDMDVAAAVIGIRPMYAKLSAFAVSSFIV HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEECHHHHHHHHHCCHHHHHHHHHHHHHHHH GMSGALWGFVYLGAWEPAAFSVDQSFRLLFMVIIGGMGSILGGFLGAAFITVLPIALNQF HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH LPVLAQLLGFEISTAGISHAELMIFGGLIVWFLIVEPHGLAKLWSIGKQKLRLWPFPH HHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHCCCCCCCC >Mature Secondary Structure MLYRENGQFKTTYRADQQIFPIAQDRLVVALFLLFAFIAVPMLASDYLFRAILIPFLIIS CCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAALGVNILVGYCGQISLGSGAFMAVGAYGAYNFFVRLPGLPLIPALILGGLCATFFGIL HHHHHHHHHHHHCCCEECCCCCEEEEECCHHEEEEEECCCCCHHHHHHHHHHHHHHHHHH FGLPSLRVKGLYLAVATLAAQFFADWMFLRIKWFTLDSPSGSVSVSNLQVFGFPIESAHS HCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCEEEEEEEEEECCHHHCCC KYWLCLSILVVMALLAKNLVRGAIGREWMAIRDMDVAAAVIGIRPMYAKLSAFAVSSFIV HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEECHHHHHHHHHCCHHHHHHHHHHHHHHHH GMSGALWGFVYLGAWEPAAFSVDQSFRLLFMVIIGGMGSILGGFLGAAFITVLPIALNQF HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH LPVLAQLLGFEISTAGISHAELMIFGGLIVWFLIVEPHGLAKLWSIGKQKLRLWPFPH HHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043 [H]