| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is livH [H]
Identifier: 91786471
GI number: 91786471
Start: 567658
End: 568572
Strand: Direct
Name: livH [H]
Synonym: Bpro_0565
Alternate gene names: 91786471
Gene position: 567658-568572 (Clockwise)
Preceding gene: 91786470
Following gene: 91786472
Centisome position: 10.92
GC content: 62.95
Gene sequence:
>915_bases ATGACACTTTCTGAAATGCTCAACATTGGCCTGATGCAGGGCTTTGCCGGTTTGAGCCTGTTTTCCGTGCTGTTGCTGAT GGGTCTGGGACTGGCCATCATCTTTGGGCAGATGGGTGTCATCAACATGGCGCATGGCGAGTTCATGACCATAGGCGCTT ACACCATCTACCTGTTTTCGCACCTGGCCGAGGCCTACGCGCCCAGGCTCGTGCAGTCCTACTTCCTGTTCGCCATCGTC GCGGCCTTCCTGCTGGCCTTCGCCGTCGGCTGGCTGGCCGAATGGGCCTTCATCCGGCATCTCTATAAACGCCCGCTCGA CACCCTGCTCGCCACCTGGGGCCTGTCGCTGGGCATGCAGCAGATCTTTCGCTCGTCGTTCGGCGCCAAGGAAGTCAGCC CCACGCTGCCCGACTGGCTGATGGGCTCCTGGGCCCCGGCCCCGGGCCTGGACATTCCCATCAACGGCATGTTCGTGATG GCGCTCACCCTGGTGGTGACCTGTGGCGTGCTGCTGGCGCTTTACAGGTCGCGCTGGGGCCTGCGGGTGCGTGCCACGGT GGCCAACCGCGTGATGGCCAATGCCACGGGCATCAACACCCGCAAGACGGACCGCCTGACCTTTGCGATTGGCTGCGGCA TTGCCGGTGTGGCCGGCGCGGCCTTCACCACCATCGGGTCAACCGGCCCTACCAGCGGTTCGCTGTACATCGTGGACGCG TTCCTGGTGGTCACCTTTGGTGGCGCTGCCAGCCTGCTCGGAACCGTGGTCTCCGCCTTTGGCATCGCACAAACCCAGTC CATCGCCGAGTTTTTCATGACCGGCTCCATGGCCAAGGTACTGACCCTGATGACCATCGTGACCATTCTGATGCTGCGCC CCCAAGGCTTGTTTGCGGCCAAGGTGCGGCGCTGA
Upstream 100 bases:
>100_bases TTCGTTCCCGCCATCCGCGGGTGCGGGCCGGCAGGGGTATTCAAGAGCGCGCACTGTCACTGCGCCACGCCACGCCACGC CAGCCGAATTGGAGTTCACC
Downstream 100 bases:
>100_bases TGGCGTCCCAGCAACTGATATTCAACCGGAGTTTCCTATGAACAGCCTCAAGCAGTGGGTGGAACGAAACAGGATGGGCA GCGTGCTGTTGCTGGCGGTG
Product: inner-membrane translocator
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: LIV-I protein H [H]
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MTLSEMLNIGLMQGFAGLSLFSVLLLMGLGLAIIFGQMGVINMAHGEFMTIGAYTIYLFSHLAEAYAPRLVQSYFLFAIV AAFLLAFAVGWLAEWAFIRHLYKRPLDTLLATWGLSLGMQQIFRSSFGAKEVSPTLPDWLMGSWAPAPGLDIPINGMFVM ALTLVVTCGVLLALYRSRWGLRVRATVANRVMANATGINTRKTDRLTFAIGCGIAGVAGAAFTTIGSTGPTSGSLYIVDA FLVVTFGGAASLLGTVVSAFGIAQTQSIAEFFMTGSMAKVLTLMTIVTILMLRPQGLFAAKVRR
Sequences:
>Translated_304_residues MTLSEMLNIGLMQGFAGLSLFSVLLLMGLGLAIIFGQMGVINMAHGEFMTIGAYTIYLFSHLAEAYAPRLVQSYFLFAIV AAFLLAFAVGWLAEWAFIRHLYKRPLDTLLATWGLSLGMQQIFRSSFGAKEVSPTLPDWLMGSWAPAPGLDIPINGMFVM ALTLVVTCGVLLALYRSRWGLRVRATVANRVMANATGINTRKTDRLTFAIGCGIAGVAGAAFTTIGSTGPTSGSLYIVDA FLVVTFGGAASLLGTVVSAFGIAQTQSIAEFFMTGSMAKVLTLMTIVTILMLRPQGLFAAKVRR >Mature_303_residues TLSEMLNIGLMQGFAGLSLFSVLLLMGLGLAIIFGQMGVINMAHGEFMTIGAYTIYLFSHLAEAYAPRLVQSYFLFAIVA AFLLAFAVGWLAEWAFIRHLYKRPLDTLLATWGLSLGMQQIFRSSFGAKEVSPTLPDWLMGSWAPAPGLDIPINGMFVMA LTLVVTCGVLLALYRSRWGLRVRATVANRVMANATGINTRKTDRLTFAIGCGIAGVAGAAFTTIGSTGPTSGSLYIVDAF LVVTFGGAASLLGTVVSAFGIAQTQSIAEFFMTGSMAKVLTLMTIVTILMLRPQGLFAAKVRR
Specific function: Part of the binding-protein-dependent transport system for branched-chain amino acids. Probably responsible for the translocation of the substrates across the membrane [H]
COG id: COG0559
COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789866, Length=303, Percent_Identity=27.0627062706271, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 32564; Mature: 32433
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSEMLNIGLMQGFAGLSLFSVLLLMGLGLAIIFGQMGVINMAHGEFMTIGAYTIYLFS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEHHHHHHHHHH HLAEAYAPRLVQSYFLFAIVAAFLLAFAVGWLAEWAFIRHLYKRPLDTLLATWGLSLGMQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QIFRSSFGAKEVSPTLPDWLMGSWAPAPGLDIPINGMFVMALTLVVTCGVLLALYRSRWG HHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC LRVRATVANRVMANATGINTRKTDRLTFAIGCGIAGVAGAAFTTIGSTGPTSGSLYIVDA CEEHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHH FLVVTFGGAASLLGTVVSAFGIAQTQSIAEFFMTGSMAKVLTLMTIVTILMLRPQGLFAA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHH KVRR HCCC >Mature Secondary Structure TLSEMLNIGLMQGFAGLSLFSVLLLMGLGLAIIFGQMGVINMAHGEFMTIGAYTIYLFS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEHHHHHHHHHH HLAEAYAPRLVQSYFLFAIVAAFLLAFAVGWLAEWAFIRHLYKRPLDTLLATWGLSLGMQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QIFRSSFGAKEVSPTLPDWLMGSWAPAPGLDIPINGMFVMALTLVVTCGVLLALYRSRWG HHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC LRVRATVANRVMANATGINTRKTDRLTFAIGCGIAGVAGAAFTTIGSTGPTSGSLYIVDA CEEHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHH FLVVTFGGAASLLGTVVSAFGIAQTQSIAEFFMTGSMAKVLTLMTIVTILMLRPQGLFAA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHH KVRR HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]