| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is hyuA [H]
Identifier: 91786457
GI number: 91786457
Start: 549982
End: 551418
Strand: Direct
Name: hyuA [H]
Synonym: Bpro_0551
Alternate gene names: 91786457
Gene position: 549982-551418 (Clockwise)
Preceding gene: 91786453
Following gene: 91786458
Centisome position: 10.58
GC content: 65.69
Gene sequence:
>1437_bases ATGAGCCGCGCGCCGTTTGACCTGGTGATCCGGAATGCATGTGTTGCCACGGCCAGCGACACCTTCAAGGCCGATATCGG GGTACTCGACGGACGGATATCGCAATTGGGCGTGGGCCTGGACCGGGGTGAGAAGGAAATCGACGCGGCTGGCCGCATCG TGACCCCCGGAGGCGTGGACGCGCATTGCCATCTGGACCAGCCGATGGCGCCGCCGGTGCGCATGGCCGACAACTTTGAC ACCGGCACGCGTGCCGCGGCCTGCGGCGGGACCACCACCGTGATTCCGTTCGCGGCGCAGGAAAAAGGCCAATCACTGCG GGCCGCCGTGGCTGACTACCACCAGCGTGCCGATGGGCGCGCGCATGTCGATTACGCCTTCCACCTGATCGTCAGCGACC CGACACCGGAAGTCCTGAACGTGGAGCTGCCGGCGCTGATCGCCGAAGGCTACACCTCGTTCAAGATCTACATGACCTAC GACGACCTGAAGCTTGACGATGGCCAGATTCTCGACGTGCTGGACGTGGCGCGCCAGCATGGCGCCATGGCCATGGTGCA CGCGGAGAATGCCGATTGCATCGAATGGCTGACGAAGCGGCTCGAAGCCGCCGGGCGTACCGCGCCGCGCTTTCATGCGC ATGCGCGGCCCATGCTCGTCGAGCGGGAAGCGACACACCGGGCGATCGCGCTGTCGGAACTGGTGGATGTGCCGATTTTG ATCGTGCATGTGTCGGGCCGTGAAGCGGTTGAGCAGATCCGCTGGGCGCGTGCCCAGGGCCTCAAGGTGTTTGCCGAAAC CTGCCCGCAGTACCTGTTCCTGACCGCCGAGGATCTGGGGATGGACGACAGCTACCGCGGCGCGCGCTGTGTCTGCAGCC CCCCGCCGCGCGACAAGGCCAACCAGGAGGTGATCTGGAATGGCCTCAACGATGGCCTGTTCACCCTGTTCTCGTCCGAC CATGCGCCGTTCAACTACGAGGGCACCGAGGGCCGCAAGCCCGGTGGCGAGGAAGTGAGTTTCCGCCACATCCCCAACGG CCTGGCCGGCATAGAGACGCGCATGGCGCTGCTCTATTCCGAAGGCGTGCTCGGCGGGCGTATCACGCTGCAAAAATTCG TTGAACTGACTGCCACCAACCCGGCCAAGGCTTATGGCCTGCATCCCCGCAAAGGCACGATCGCCATTGGCGCCGATGCC GACCTGGTGATCTGGGATGAACGCGAGTTCGTGCTGCGCAACACGCAGCTGCATCATGCGGTGGACCACACGCCCTATGA AGGCATGACCCTGAAAGCCTGGCCCGGGCTCACGCTGTCGCGCGGCGAGGTGGTGTGGGACGGCCGGGACTTCCATGGCC GGGCCGGTCGCGGCCAGTTCCTGGCCTGTGGCGCGCCCTCGCTGATGCCGTCGCGCCACGTCGGGAGGCCGGCATGA
Upstream 100 bases:
>100_bases TGACGATGCACCAAAACAACTTAATGCAAAACATGTCGACAATTATGTTTGCACTAAAGATGACATTTATTCACCGCCTT GGTGCGCCCGAGGTTGCGGC
Downstream 100 bases:
>100_bases AGCTGCTGCTGATCAACCCGAATATCTCGGAGAGCGTGTCGGAGCTGATCCGCAGCGAAGCGCAACGCAGCGCTTCGGCA GGCACCGAGATCAAGGTGCT
Product: phenylhydantoinase
Products: 3-ureidopropanoate
Alternate protein names: NA
Number of amino acids: Translated: 478; Mature: 477
Protein sequence:
>478_residues MSRAPFDLVIRNACVATASDTFKADIGVLDGRISQLGVGLDRGEKEIDAAGRIVTPGGVDAHCHLDQPMAPPVRMADNFD TGTRAAACGGTTTVIPFAAQEKGQSLRAAVADYHQRADGRAHVDYAFHLIVSDPTPEVLNVELPALIAEGYTSFKIYMTY DDLKLDDGQILDVLDVARQHGAMAMVHAENADCIEWLTKRLEAAGRTAPRFHAHARPMLVEREATHRAIALSELVDVPIL IVHVSGREAVEQIRWARAQGLKVFAETCPQYLFLTAEDLGMDDSYRGARCVCSPPPRDKANQEVIWNGLNDGLFTLFSSD HAPFNYEGTEGRKPGGEEVSFRHIPNGLAGIETRMALLYSEGVLGGRITLQKFVELTATNPAKAYGLHPRKGTIAIGADA DLVIWDEREFVLRNTQLHHAVDHTPYEGMTLKAWPGLTLSRGEVVWDGRDFHGRAGRGQFLACGAPSLMPSRHVGRPA
Sequences:
>Translated_478_residues MSRAPFDLVIRNACVATASDTFKADIGVLDGRISQLGVGLDRGEKEIDAAGRIVTPGGVDAHCHLDQPMAPPVRMADNFD TGTRAAACGGTTTVIPFAAQEKGQSLRAAVADYHQRADGRAHVDYAFHLIVSDPTPEVLNVELPALIAEGYTSFKIYMTY DDLKLDDGQILDVLDVARQHGAMAMVHAENADCIEWLTKRLEAAGRTAPRFHAHARPMLVEREATHRAIALSELVDVPIL IVHVSGREAVEQIRWARAQGLKVFAETCPQYLFLTAEDLGMDDSYRGARCVCSPPPRDKANQEVIWNGLNDGLFTLFSSD HAPFNYEGTEGRKPGGEEVSFRHIPNGLAGIETRMALLYSEGVLGGRITLQKFVELTATNPAKAYGLHPRKGTIAIGADA DLVIWDEREFVLRNTQLHHAVDHTPYEGMTLKAWPGLTLSRGEVVWDGRDFHGRAGRGQFLACGAPSLMPSRHVGRPA >Mature_477_residues SRAPFDLVIRNACVATASDTFKADIGVLDGRISQLGVGLDRGEKEIDAAGRIVTPGGVDAHCHLDQPMAPPVRMADNFDT GTRAAACGGTTTVIPFAAQEKGQSLRAAVADYHQRADGRAHVDYAFHLIVSDPTPEVLNVELPALIAEGYTSFKIYMTYD DLKLDDGQILDVLDVARQHGAMAMVHAENADCIEWLTKRLEAAGRTAPRFHAHARPMLVEREATHRAIALSELVDVPILI VHVSGREAVEQIRWARAQGLKVFAETCPQYLFLTAEDLGMDDSYRGARCVCSPPPRDKANQEVIWNGLNDGLFTLFSSDH APFNYEGTEGRKPGGEEVSFRHIPNGLAGIETRMALLYSEGVLGGRITLQKFVELTATNPAKAYGLHPRKGTIAIGADAD LVIWDEREFVLRNTQLHHAVDHTPYEGMTLKAWPGLTLSRGEVVWDGRDFHGRAGRGQFLACGAPSLMPSRHVGRPA
Specific function: Catalyzes the stereospecific hydrolysis of the cyclic amide bond of D-hydantoin derivatives [H]
COG id: COG0044
COG function: function code F; Dihydroorotase and related cyclic amidohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DHOase family. Hydantoinase/dihydropyrimidinase subfamily [H]
Homologues:
Organism=Homo sapiens, GI4503375, Length=468, Percent_Identity=36.5384615384615, Blast_Score=261, Evalue=1e-69, Organism=Homo sapiens, GI4503377, Length=460, Percent_Identity=34.3478260869565, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI4503051, Length=460, Percent_Identity=33.4782608695652, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI62422571, Length=460, Percent_Identity=33.4782608695652, Blast_Score=243, Evalue=4e-64, Organism=Homo sapiens, GI4503379, Length=462, Percent_Identity=32.9004329004329, Blast_Score=242, Evalue=4e-64, Organism=Homo sapiens, GI190194363, Length=463, Percent_Identity=34.1252699784017, Blast_Score=241, Evalue=8e-64, Organism=Homo sapiens, GI19923821, Length=467, Percent_Identity=35.5460385438972, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI18105007, Length=397, Percent_Identity=25.6926952141058, Blast_Score=97, Evalue=3e-20, Organism=Escherichia coli, GI87082175, Length=459, Percent_Identity=39.6514161220044, Blast_Score=306, Evalue=3e-84, Organism=Escherichia coli, GI1786722, Length=468, Percent_Identity=31.6239316239316, Blast_Score=193, Evalue=3e-50, Organism=Caenorhabditis elegans, GI17539558, Length=463, Percent_Identity=33.0453563714903, Blast_Score=240, Evalue=1e-63, Organism=Caenorhabditis elegans, GI71989490, Length=471, Percent_Identity=33.5456475583864, Blast_Score=231, Evalue=8e-61, Organism=Caenorhabditis elegans, GI86575075, Length=458, Percent_Identity=27.292576419214, Blast_Score=162, Evalue=4e-40, Organism=Caenorhabditis elegans, GI193204318, Length=399, Percent_Identity=23.8095238095238, Blast_Score=89, Evalue=5e-18, Organism=Saccharomyces cerevisiae, GI6322218, Length=475, Percent_Identity=27.3684210526316, Blast_Score=129, Evalue=1e-30, Organism=Drosophila melanogaster, GI221377917, Length=468, Percent_Identity=35.6837606837607, Blast_Score=241, Evalue=7e-64, Organism=Drosophila melanogaster, GI17137462, Length=467, Percent_Identity=34.6895074946467, Blast_Score=237, Evalue=1e-62, Organism=Drosophila melanogaster, GI24644287, Length=314, Percent_Identity=35.6687898089172, Blast_Score=154, Evalue=2e-37, Organism=Drosophila melanogaster, GI24644289, Length=234, Percent_Identity=37.1794871794872, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI24642586, Length=416, Percent_Identity=26.2019230769231, Blast_Score=112, Evalue=6e-25, Organism=Drosophila melanogaster, GI18859883, Length=220, Percent_Identity=30, Blast_Score=83, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011778 - InterPro: IPR011059 - InterPro: IPR011612 [H]
Pfam domain/function: PF01979 Amidohydro_1; PF00449 Urease_alpha [H]
EC number: 3.5.2.2
Molecular weight: Translated: 52154; Mature: 52022
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRAPFDLVIRNACVATASDTFKADIGVLDGRISQLGVGLDRGEKEIDAAGRIVTPGGVD CCCCCHHHHHHHHHEECCCCCCEECHHHHCCCHHHHCCCCCCCCHHHHCCCCEECCCCCC AHCHLDQPMAPPVRMADNFDTGTRAAACGGTTTVIPFAAQEKGQSLRAAVADYHQRADGR EEEECCCCCCCCCEECCCCCCCCCEEECCCCEEEEEECCHHCCHHHHHHHHHHHHHCCCC AHVDYAFHLIVSDPTPEVLNVELPALIAEGYTSFKIYMTYDDLKLDDGQILDVLDVARQH EEEEEEEEEEECCCCCCEEEEEHHHHHHCCCCEEEEEEEECCEECCCCCHHHHHHHHHHC GAMAMVHAENADCIEWLTKRLEAAGRTAPRFHAHARPMLVEREATHRAIALSELVDVPIL CCEEEEECCCCHHHHHHHHHHHHCCCCCCCHHCCCCCEEEECCHHHHHHHHHHHCCCCEE IVHVSGREAVEQIRWARAQGLKVFAETCPQYLFLTAEDLGMDDSYRGARCVCSPPPRDKA EEEECCHHHHHHHHHHHHCCHHHHHHCCCCEEEEEHHHCCCCCCCCCCEEECCCCCCCCC NQEVIWNGLNDGLFTLFSSDHAPFNYEGTEGRKPGGEEVSFRHIPNGLAGIETRMALLYS CCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHEEC EGVLGGRITLQKFVELTATNPAKAYGLHPRKGTIAIGADADLVIWDEREFVLRNTQLHHA CCCCCCEEHHHHHHHHHCCCCHHHCCCCCCCCEEEECCCCCEEEECCCEEEEECCHHHHH VDHTPYEGMTLKAWPGLTLSRGEVVWDGRDFHGRAGRGQFLACGAPSLMPSRHVGRPA HCCCCCCCEEEEECCCCEEECCEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC >Mature Secondary Structure SRAPFDLVIRNACVATASDTFKADIGVLDGRISQLGVGLDRGEKEIDAAGRIVTPGGVD CCCCHHHHHHHHHEECCCCCCEECHHHHCCCHHHHCCCCCCCCHHHHCCCCEECCCCCC AHCHLDQPMAPPVRMADNFDTGTRAAACGGTTTVIPFAAQEKGQSLRAAVADYHQRADGR EEEECCCCCCCCCEECCCCCCCCCEEECCCCEEEEEECCHHCCHHHHHHHHHHHHHCCCC AHVDYAFHLIVSDPTPEVLNVELPALIAEGYTSFKIYMTYDDLKLDDGQILDVLDVARQH EEEEEEEEEEECCCCCCEEEEEHHHHHHCCCCEEEEEEEECCEECCCCCHHHHHHHHHHC GAMAMVHAENADCIEWLTKRLEAAGRTAPRFHAHARPMLVEREATHRAIALSELVDVPIL CCEEEEECCCCHHHHHHHHHHHHCCCCCCCHHCCCCCEEEECCHHHHHHHHHHHCCCCEE IVHVSGREAVEQIRWARAQGLKVFAETCPQYLFLTAEDLGMDDSYRGARCVCSPPPRDKA EEEECCHHHHHHHHHHHHCCHHHHHHCCCCEEEEEHHHCCCCCCCCCCEEECCCCCCCCC NQEVIWNGLNDGLFTLFSSDHAPFNYEGTEGRKPGGEEVSFRHIPNGLAGIETRMALLYS CCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHEEC EGVLGGRITLQKFVELTATNPAKAYGLHPRKGTIAIGADADLVIWDEREFVLRNTQLHHA CCCCCCEEHHHHHHHHHCCCCHHHCCCCCCCCEEEECCCCCEEEECCCEEEEECCHHHHH VDHTPYEGMTLKAWPGLTLSRGEVVWDGRDFHGRAGRGQFLACGAPSLMPSRHVGRPA HCCCCCCCEEEEECCCCEEECCEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 5,6-dihydrouracil; H2O
Specific reaction: 5,6-dihydrouracil + H2O = 3-ureidopropanoate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA