| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786448
Identifier: 91786448
GI number: 91786448
Start: 540474
End: 541106
Strand: Reverse
Name: 91786448
Synonym: Bpro_0542
Alternate gene names: NA
Gene position: 541106-540474 (Counterclockwise)
Preceding gene: 91786451
Following gene: 91786447
Centisome position: 10.41
GC content: 63.82
Gene sequence:
>633_bases ATGCTCTCGATAATTCGTTCCATGAATCGCGGCCCAGAGCACCAGGACAAAGCACCGATCCATCCCGTATGGATGCGCAT CACGCACTGGTTGAATGCCCTCGCCGTGCTGGTGCTGGGTGCTAGTGGCTGGCGCCTCTACAACGCGGCGCCATTCTTCC CTTTCAACATCCCCAGGCAACTCACACTCGGGGGCTGGCTCGGCGGTGCGCTTCAATGGCACTTTGCCGCCATGTGGGTG CTGGGCGTCAATGGCCTGCTGTACCTGGCCTTCAACCTCGCCACCGGCCGCCTGCTGCGCAAGTTCTTTCCGCTCTCTCC CCGGGCCCTGCTGGCCGATCTGCAGGCCGCGCTCAAGGGCCGGCTCGCCCATGCCGACCCGCGGCATTACAACATGGTGC AGCGCCTGGCCTACCTGTTTGTGATGGTCGACAGCGTCCTGCTGGTGATCTCTGGCCTGGTGCTCTGGAAGTCGGTGCAA TTCCCGCTGCTGCGCGAGCTGATGGGTGGCTACGAAGGCGCCCGGTTGGTGCACTTTTTCGCCATGGCCGCACTGGCCGC GTTTGTGGCGGTTCACCTGGTGATGGTGGCGCTGGTGCCGCGCACGCTGCTGTACATGGTTCGCGGCCGCTAA
Upstream 100 bases:
>100_bases CAAAACGCGCTTAGCGGATTCCATGGAATGGATTATCCCGCGATATCGCCCTTGAGGTTGTCACGATTAATTGAACTCTT TGTGATGAATCGGTCATTGC
Downstream 100 bases:
>100_bases GGAGCCTGACGTGATGATCAAAACCCCTCCCCGCCTGGCCATTGACGGCGACGCCGTGCTCAAGGAAGCCGTGAGCCGAA TCAGCCACGCCAGTCGCATC
Product: putative transmembrane hydrogenase cytochrome b-type subunit oxidoreductase protein
Products: NA
Alternate protein names: Cytochrome B; Transmembrane Hydrogenase Cytochrome B-Type Subunit; HupC/HyaC/HydC Family Protein; Thiosulfate Reductase Cytochrome Subunit B; Thiosulfate Reductase Cytochrome B Subunit-Like Protein; Transmembrane Hydrogenase Cytochrome B- Type Subunit; Cytochrome; Conserved Protein; B-Type Cytochomre; Transmembrane Hydrogenase Cytochrome
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MLSIIRSMNRGPEHQDKAPIHPVWMRITHWLNALAVLVLGASGWRLYNAAPFFPFNIPRQLTLGGWLGGALQWHFAAMWV LGVNGLLYLAFNLATGRLLRKFFPLSPRALLADLQAALKGRLAHADPRHYNMVQRLAYLFVMVDSVLLVISGLVLWKSVQ FPLLRELMGGYEGARLVHFFAMAALAAFVAVHLVMVALVPRTLLYMVRGR
Sequences:
>Translated_210_residues MLSIIRSMNRGPEHQDKAPIHPVWMRITHWLNALAVLVLGASGWRLYNAAPFFPFNIPRQLTLGGWLGGALQWHFAAMWV LGVNGLLYLAFNLATGRLLRKFFPLSPRALLADLQAALKGRLAHADPRHYNMVQRLAYLFVMVDSVLLVISGLVLWKSVQ FPLLRELMGGYEGARLVHFFAMAALAAFVAVHLVMVALVPRTLLYMVRGR >Mature_210_residues MLSIIRSMNRGPEHQDKAPIHPVWMRITHWLNALAVLVLGASGWRLYNAAPFFPFNIPRQLTLGGWLGGALQWHFAAMWV LGVNGLLYLAFNLATGRLLRKFFPLSPRALLADLQAALKGRLAHADPRHYNMVQRLAYLFVMVDSVLLVISGLVLWKSVQ FPLLRELMGGYEGARLVHFFAMAALAAFVAVHLVMVALVPRTLLYMVRGR
Specific function: Unknown
COG id: COG4117
COG function: function code C; Thiosulfate reductase cytochrome B subunit (membrane anchoring protein)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23609; Mature: 23609
Theoretical pI: Translated: 11.77; Mature: 11.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSIIRSMNRGPEHQDKAPIHPVWMRITHWLNALAVLVLGASGWRLYNAAPFFPFNIPRQ CHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCC LTLGGWLGGALQWHFAAMWVLGVNGLLYLAFNLATGRLLRKFFPLSPRALLADLQAALKG EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC RLAHADPRHYNMVQRLAYLFVMVDSVLLVISGLVLWKSVQFPLLRELMGGYEGARLVHFF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHH AMAALAAFVAVHLVMVALVPRTLLYMVRGR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLSIIRSMNRGPEHQDKAPIHPVWMRITHWLNALAVLVLGASGWRLYNAAPFFPFNIPRQ CHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCC LTLGGWLGGALQWHFAAMWVLGVNGLLYLAFNLATGRLLRKFFPLSPRALLADLQAALKG EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC RLAHADPRHYNMVQRLAYLFVMVDSVLLVISGLVLWKSVQFPLLRELMGGYEGARLVHFF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHH AMAALAAFVAVHLVMVALVPRTLLYMVRGR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA