Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91786438

Identifier: 91786438

GI number: 91786438

Start: 529417

End: 530106

Strand: Reverse

Name: 91786438

Synonym: Bpro_0530

Alternate gene names: NA

Gene position: 530106-529417 (Counterclockwise)

Preceding gene: 91786439

Following gene: 91786437

Centisome position: 10.19

GC content: 55.65

Gene sequence:

>690_bases
ATGCATGCCATCAAAGCCGTTGTTTTTGACCTGTACGGTACCTTGTACGACGTTTACTCTGTCCGCACCTCCTGCGAGCG
CATCTTCCCCGGCCAGGGCGAGATGGTCAGCAAGATGTGGCGCCAAAAGCAACTTGAATACACATGGATGAGAACGCTGA
TGGGCCAGTACCAAGACTTCGAGAGCGCCACCCTCGATGCGTTGCGCTACACCTGTGGCAGTCTAGGTCTGGCGCTCGAT
GCAGACGGTGAAGCACACCTGTGCTCGGAGTACCTGAGTCTGACCCCTTTCGCGGATGTTCCACAGGCGCTTCAGCAGTT
GCGGGCCGCAGGGCTGAAAACCGCCATTTTGTCCAACGGTTCGCGCCATTCCATCCGCCAGGTGGTGGGCAATTCGGGGT
TGACCAACTCCTTCGATCACTTGATCAGCGTTGACGAAGTGCGGCTGTTCAAACCGCACCAGAAAGTTTATGAACTTGCG
ATGGATACCCTGCACTTGGGTGAATCAGAAATTCTGTTCGTCTCATGTAACTCATGGGATGCGACGGGCGCCAAGTATTT
TGGCTACCCGGTATGCTGGATCAATCGCAGCAATGGCGTGTTTGATCAACTGGGTGTCGTGCCCGACATCGTGGTCAGCG
ATGTGGGCGTGCTTGCCTCGCGTTTTTCGCCGGTAGACGAGGCTGCATAA

Upstream 100 bases:

>100_bases
CGGCAGGAATGCCAAGCTTGAAGCCCACTTTGACCAGGTACTGTTCAAGGCCCAGACCGCCATAGCCATCGATTGATTTT
TAAAAGTTTTGGAGAACAGT

Downstream 100 bases:

>100_bases
AATGAAATAACTAGTGCGCGGGGAGTTGCCTCAGTCAGCGCCATGATCAGCGGCTAGCATTCGACGTTGTGCTTGGGATT
GGCATAAAGAAAGGCAAGAC

Product: haloacid dehalogenase

Products: NA

Alternate protein names: Cryptic L-isomer-specific dehalogenase; DhlS5I; Halocarboxylic acid halidohydrolase; L-2-haloacid dehalogenase; L-DEX [H]

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MHAIKAVVFDLYGTLYDVYSVRTSCERIFPGQGEMVSKMWRQKQLEYTWMRTLMGQYQDFESATLDALRYTCGSLGLALD
ADGEAHLCSEYLSLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELA
MDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASRFSPVDEAA

Sequences:

>Translated_229_residues
MHAIKAVVFDLYGTLYDVYSVRTSCERIFPGQGEMVSKMWRQKQLEYTWMRTLMGQYQDFESATLDALRYTCGSLGLALD
ADGEAHLCSEYLSLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELA
MDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASRFSPVDEAA
>Mature_229_residues
MHAIKAVVFDLYGTLYDVYSVRTSCERIFPGQGEMVSKMWRQKQLEYTWMRTLMGQYQDFESATLDALRYTCGSLGLALD
ADGEAHLCSEYLSLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELA
MDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASRFSPVDEAA

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. S-2- haloalkanoic acid dehalogenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006388
- InterPro:   IPR006328
- InterPro:   IPR005833 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: =3.8.1.2 [H]

Molecular weight: Translated: 25447; Mature: 25447

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAIKAVVFDLYGTLYDVYSVRTSCERIFPGQGEMVSKMWRQKQLEYTWMRTLMGQYQDF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESATLDALRYTCGSLGLALDADGEAHLCSEYLSLTPFADVPQALQQLRAAGLKTAILSNG
HHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
SRHSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLGESEILFVSCNSWD
CHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECCCC
ATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASRFSPVDEAA
CCCCHHCCCEEEEEECCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MHAIKAVVFDLYGTLYDVYSVRTSCERIFPGQGEMVSKMWRQKQLEYTWMRTLMGQYQDF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESATLDALRYTCGSLGLALDADGEAHLCSEYLSLTPFADVPQALQQLRAAGLKTAILSNG
HHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
SRHSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLGESEILFVSCNSWD
CHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECCCC
ATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASRFSPVDEAA
CCCCHHCCCEEEEEECCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA