Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yfeX [H]

Identifier: 91786383

GI number: 91786383

Start: 489163

End: 490086

Strand: Direct

Name: yfeX [H]

Synonym: Bpro_0473

Alternate gene names: 91786383

Gene position: 489163-490086 (Clockwise)

Preceding gene: 91786382

Following gene: 91786384

Centisome position: 9.41

GC content: 66.88

Gene sequence:

>924_bases
ATGAGCCTCTCCCAACCTGGAATTTCGCAAGCGGTGCCCACCGTCGGGCGCTATGCTTTTTTCTCGATCACAGCCCCGGC
TGCCGCGCAGCCGGCGGTCCTGCGCCAAAGCCTGCAGCGCCTCGCTCCGCTGGTGGACGGCCAGGCCGTGGTGGCTGCCT
TCGGCGCCAGGCTGGTTGCGGCCCTGGGCGGAACAGTCCCGGGCCTGCGCGACTTTCCGGTCCTTTCGGAGGGTGCTGTG
GAGGTTCCGGCCACGCCGACCGCGCTGTGCCTGTGGCTGCGCGGCAGTGACCAGGGTGACTTGGTGTTGCTGACGCGGCG
ACTGGAAAAGGCGCTGGCGCCGGCCTTTCACCTGGATCGCGTGATCGAGTCCTTTCGCCACGGCCGGGGGCCGACCGGCC
ACGGCCGCGACCTCACGGGCTACGAAGATGGCACCGAAAACCCGGAAGGCGAGGCGGCCGATGCCGCCGCTTTCGTGCAG
GGCCTGGGCGCGGGACTCGACGGATCGAGTTTTGTCGCTATCCAGCAGTGGCTGCATGACCTGGATGCGTTCGAAGCCAT
GAGCCGGGCCGAGCAGGATAACACCGTGGGCCGGCGACGCAGCGACAACGAAGAACTGGAGGACGCACCCGAATCGTCCC
ACGTCAAACGCACCGCACAGGAAAGCTTTCAACCCGAGGCTTTTGTGCTGCGCCGCTCCATGCCGTGGGCGCTGCATGCG
CCGGGCGGCAGCAAGGTCGGTTTGGTGTTTGTGGCGTTTGGCTGCTCGTTCGATGCGTTTGAAGCGCAGATGCGCCGCAT
GGCGGGGCTGGACGATGGCATTGTGGATGCGCTGTTTCGTATCTCCAGACCGGTCAGCGGGGCCTACCTGTGGTGTCCGC
CCATGCAGGCTGGCCGGCTCGATCTGCGGCAGCTCGGCTTGTGA

Upstream 100 bases:

>100_bases
TGGCGCCGCAGCTTCACGCGCTATGAAGCGATTGCGGCGTTGCGCAATGCCATTTACGCCTGCGAGTTGCCGGGTGTCAC
ACGATTGTCCTGATGCAACG

Downstream 100 bases:

>100_bases
TGCTGCGCCGCAAACTGGGTCTTTACCTTGCGCTGATCCGCTGGAACCGTCCGGCGGGCTGGCTGCTGCTGCTCTGGCCT
ACGCTGTCGGCGCTATGGGT

Product: Dyp-type peroxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MSLSQPGISQAVPTVGRYAFFSITAPAAAQPAVLRQSLQRLAPLVDGQAVVAAFGARLVAALGGTVPGLRDFPVLSEGAV
EVPATPTALCLWLRGSDQGDLVLLTRRLEKALAPAFHLDRVIESFRHGRGPTGHGRDLTGYEDGTENPEGEAADAAAFVQ
GLGAGLDGSSFVAIQQWLHDLDAFEAMSRAEQDNTVGRRRSDNEELEDAPESSHVKRTAQESFQPEAFVLRRSMPWALHA
PGGSKVGLVFVAFGCSFDAFEAQMRRMAGLDDGIVDALFRISRPVSGAYLWCPPMQAGRLDLRQLGL

Sequences:

>Translated_307_residues
MSLSQPGISQAVPTVGRYAFFSITAPAAAQPAVLRQSLQRLAPLVDGQAVVAAFGARLVAALGGTVPGLRDFPVLSEGAV
EVPATPTALCLWLRGSDQGDLVLLTRRLEKALAPAFHLDRVIESFRHGRGPTGHGRDLTGYEDGTENPEGEAADAAAFVQ
GLGAGLDGSSFVAIQQWLHDLDAFEAMSRAEQDNTVGRRRSDNEELEDAPESSHVKRTAQESFQPEAFVLRRSMPWALHA
PGGSKVGLVFVAFGCSFDAFEAQMRRMAGLDDGIVDALFRISRPVSGAYLWCPPMQAGRLDLRQLGL
>Mature_306_residues
SLSQPGISQAVPTVGRYAFFSITAPAAAQPAVLRQSLQRLAPLVDGQAVVAAFGARLVAALGGTVPGLRDFPVLSEGAVE
VPATPTALCLWLRGSDQGDLVLLTRRLEKALAPAFHLDRVIESFRHGRGPTGHGRDLTGYEDGTENPEGEAADAAAFVQG
LGAGLDGSSFVAIQQWLHDLDAFEAMSRAEQDNTVGRRRSDNEELEDAPESSHVKRTAQESFQPEAFVLRRSMPWALHAP
GGSKVGLVFVAFGCSFDAFEAQMRRMAGLDDGIVDALFRISRPVSGAYLWCPPMQAGRLDLRQLGL

Specific function: Unknown

COG id: COG2837

COG function: function code P; Predicted iron-dependent peroxidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DyP-type peroxidase family [H]

Homologues:

Organism=Escherichia coli, GI87082102, Length=251, Percent_Identity=30.6772908366534, Blast_Score=102, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR006314 [H]

Pfam domain/function: PF04261 Dyp_perox [H]

EC number: NA

Molecular weight: Translated: 32850; Mature: 32718

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSQPGISQAVPTVGRYAFFSITAPAAAQPAVLRQSLQRLAPLVDGQAVVAAFGARLVA
CCCCCCCHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ALGGTVPGLRDFPVLSEGAVEVPATPTALCLWLRGSDQGDLVLLTRRLEKALAPAFHLDR
HHCCCCCCCCCCCCCCCCCEECCCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHH
VIESFRHGRGPTGHGRDLTGYEDGTENPEGEAADAAAFVQGLGAGLDGSSFVAIQQWLHD
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LDAFEAMSRAEQDNTVGRRRSDNEELEDAPESSHVKRTAQESFQPEAFVLRRSMPWALHA
HHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHCCCCHHHHHHCCCCEEEEC
PGGSKVGLVFVAFGCSFDAFEAQMRRMAGLDDGIVDALFRISRPVSGAYLWCPPMQAGRL
CCCCCEEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCH
DLRQLGL
HHHHHCC
>Mature Secondary Structure 
SLSQPGISQAVPTVGRYAFFSITAPAAAQPAVLRQSLQRLAPLVDGQAVVAAFGARLVA
CCCCCCHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ALGGTVPGLRDFPVLSEGAVEVPATPTALCLWLRGSDQGDLVLLTRRLEKALAPAFHLDR
HHCCCCCCCCCCCCCCCCCEECCCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHH
VIESFRHGRGPTGHGRDLTGYEDGTENPEGEAADAAAFVQGLGAGLDGSSFVAIQQWLHD
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LDAFEAMSRAEQDNTVGRRRSDNEELEDAPESSHVKRTAQESFQPEAFVLRRSMPWALHA
HHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHCCCCHHHHHHCCCCEEEEC
PGGSKVGLVFVAFGCSFDAFEAQMRRMAGLDDGIVDALFRISRPVSGAYLWCPPMQAGRL
CCCCCEEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCH
DLRQLGL
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]