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The map label for this gene is gylR [H]

Identifier: 91786355

GI number: 91786355

Start: 462746

End: 463609

Strand: Reverse

Name: gylR [H]

Synonym: Bpro_0445

Alternate gene names: 91786355

Gene position: 463609-462746 (Counterclockwise)

Preceding gene: 91786357

Following gene: 91786354

Centisome position: 8.92

GC content: 69.44

Gene sequence:

>864_bases
ATGAACGCTCCTCCTGGCTCCCTCGACACCCCGCTCGCCGCGCCGCCTGCTGCGCCACTCACCGATCTGCCGCCCCAGCG
CGCGGGCATTCAGTCGGTGGAAGTTGGGTTCAGCCTGCTGGGGGTGCTGGCCGCAGCACCCGGCCCGCTGATGCTGCGCG
ACCTGGCGGCGGCGGCGGGCATGAGCGCGGCCAAAGCGCACCGCTATCTGGTGAGCTTCCAGCGCCTCGGGCTGGTCACG
CAGGATGCCGGCTCCACGCGCTACGACCTGGGGCCAGCCGCGCTCAAGTTAGGGCTCGCTTCCCTTTCCCGGCTTGACAG
CGTGAAGCTGGCACGCCAACGCCTGCAGCCGCTGATGGAGCACATTGGCCAGACCCTGGCACTGGCGGTCTGGGGCAATC
AGGGCCCGACCATCGTTCACTGGGAGGAGTCGCCCCAGGCCGTCACCGTCAACCTGCGCCTGGGCGACGTGATGCCGCTG
CTGTCATCGGCCACGGGCCTGTGCTTTGCGGCCTTCATGCTGAACCAGCATGCGTCGCAAAACCGGCTGGCCGCCTTGCT
CAAGGACGAACTGGCACGCACCCAGAAGCTGGGGCGCAAGGATCTGCCCACCAGCATGGCCAAAGCGACCGCGCTGCTGG
ACGAGGTGCGCCAGCGCGGCCTGGCACGCGTCGTGGACACCCTGCTGCCCGGCGTGGCCGGTTTCTGTGCGCCGGTGTTT
GATGCCGACGGCCATCTGGCGCTGGGCATGGTGGCGCTGGGCTCGCTGGCCACGTTTGATCCGGCCTGGGACGGTGCGGT
GGCCCGACCACTGGCGGCAGCCGCCCGGCAACTTTCCAGCGATCTGGGGTTCACAGGGGCATGA

Upstream 100 bases:

>100_bases
CCGCAGCCCGGGGAACGCCTCAAAACCTGAAAATCATTGTTTCGCGTTACGATAAGTGAAATCAGTTTACCTAAATGTAA
TTCGAAATTCTCTCACTTTC

Downstream 100 bases:

>100_bases
ACAGCGTGCTGGCAGCACCAGGGGTGGCTTCGGGGGTTTCGCGCACTGCCCCCCCCCGGCGAGCGCTGGGCATGCTGGCC
GTGCTGGTGCTCGCCGTACA

Product: IclR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MNAPPGSLDTPLAAPPAAPLTDLPPQRAGIQSVEVGFSLLGVLAAAPGPLMLRDLAAAAGMSAAKAHRYLVSFQRLGLVT
QDAGSTRYDLGPAALKLGLASLSRLDSVKLARQRLQPLMEHIGQTLALAVWGNQGPTIVHWEESPQAVTVNLRLGDVMPL
LSSATGLCFAAFMLNQHASQNRLAALLKDELARTQKLGRKDLPTSMAKATALLDEVRQRGLARVVDTLLPGVAGFCAPVF
DADGHLALGMVALGSLATFDPAWDGAVARPLAAAARQLSSDLGFTGA

Sequences:

>Translated_287_residues
MNAPPGSLDTPLAAPPAAPLTDLPPQRAGIQSVEVGFSLLGVLAAAPGPLMLRDLAAAAGMSAAKAHRYLVSFQRLGLVT
QDAGSTRYDLGPAALKLGLASLSRLDSVKLARQRLQPLMEHIGQTLALAVWGNQGPTIVHWEESPQAVTVNLRLGDVMPL
LSSATGLCFAAFMLNQHASQNRLAALLKDELARTQKLGRKDLPTSMAKATALLDEVRQRGLARVVDTLLPGVAGFCAPVF
DADGHLALGMVALGSLATFDPAWDGAVARPLAAAARQLSSDLGFTGA
>Mature_287_residues
MNAPPGSLDTPLAAPPAAPLTDLPPQRAGIQSVEVGFSLLGVLAAAPGPLMLRDLAAAAGMSAAKAHRYLVSFQRLGLVT
QDAGSTRYDLGPAALKLGLASLSRLDSVKLARQRLQPLMEHIGQTLALAVWGNQGPTIVHWEESPQAVTVNLRLGDVMPL
LSSATGLCFAAFMLNQHASQNRLAALLKDELARTQKLGRKDLPTSMAKATALLDEVRQRGLARVVDTLLPGVAGFCAPVF
DADGHLALGMVALGSLATFDPAWDGAVARPLAAAARQLSSDLGFTGA

Specific function: May be an activator protein for the gylABX operon [H]

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 iclR-ED (iclR effector binding) domain [H]

Homologues:

Organism=Escherichia coli, GI1789999, Length=262, Percent_Identity=24.8091603053435, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788131, Length=266, Percent_Identity=24.4360902255639, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014757
- InterPro:   IPR005471
- InterPro:   IPR011991 [H]

Pfam domain/function: PF09339 HTH_IclR; PF01614 IclR [H]

EC number: NA

Molecular weight: Translated: 29858; Mature: 29858

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPPGSLDTPLAAPPAAPLTDLPPQRAGIQSVEVGFSLLGVLAAAPGPLMLRDLAAAAG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
MSAAKAHRYLVSFQRLGLVTQDAGSTRYDLGPAALKLGLASLSRLDSVKLARQRLQPLME
HHHHHHHHHHHHHHHHCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HIGQTLALAVWGNQGPTIVHWEESPQAVTVNLRLGDVMPLLSSATGLCFAAFMLNQHASQ
HHHHHEEEEEECCCCCEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCH
NRLAALLKDELARTQKLGRKDLPTSMAKATALLDEVRQRGLARVVDTLLPGVAGFCAPVF
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DADGHLALGMVALGSLATFDPAWDGAVARPLAAAARQLSSDLGFTGA
CCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNAPPGSLDTPLAAPPAAPLTDLPPQRAGIQSVEVGFSLLGVLAAAPGPLMLRDLAAAAG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
MSAAKAHRYLVSFQRLGLVTQDAGSTRYDLGPAALKLGLASLSRLDSVKLARQRLQPLME
HHHHHHHHHHHHHHHHCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HIGQTLALAVWGNQGPTIVHWEESPQAVTVNLRLGDVMPLLSSATGLCFAAFMLNQHASQ
HHHHHEEEEEECCCCCEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCH
NRLAALLKDELARTQKLGRKDLPTSMAKATALLDEVRQRGLARVVDTLLPGVAGFCAPVF
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DADGHLALGMVALGSLATFDPAWDGAVARPLAAAARQLSSDLGFTGA
CCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3225846; 12000953 [H]