| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786354
Identifier: 91786354
GI number: 91786354
Start: 461568
End: 462749
Strand: Reverse
Name: 91786354
Synonym: Bpro_0444
Alternate gene names: NA
Gene position: 462749-461568 (Counterclockwise)
Preceding gene: 91786355
Following gene: 91786353
Centisome position: 8.9
GC content: 65.91
Gene sequence:
>1182_bases ATGAACAGCGTGCTGGCAGCACCAGGGGTGGCTTCGGGGGTTTCGCGCACTGCCCCCCCCCGGCGAGCGCTGGGCATGCT GGCCGTGCTGGTGCTCGCCGTACACACGCTGCTGCTGCGAACGACGCCCGACCGGTTTGGCCCGGAAACGGACCCGGCAT CCACCCGCAGCCGCGCCGCGCCGGCATTTGTCACACGCAGCATTGAGGTCCCGCCACCGTCCAAGGTGCTTCCCCCGCCA GCAGCGCCTCCTGCGGTCAAGCCCGTGGTCAAGGCCCCGGTCAAACCCAAAAGGCCTCCTGTTCCTGTTCAAGAAAATGA GGCCGTAGCCGCTGATTCACCTGCGCAGCCGGCTACTGATTCTGTCGCTCCTCAAGCTCCCGACTCACTCGCGGTCAGCG AATCTCCTGCCGCGCCCAGCGCGGACAGCGTGCCGCTCCCGGCGGCCGATACAGCCACCGCATCGAATTCAACGGCCAAT ACACCACCGGAGGCCACGGCGCCACCGCCACCCGCCGGCGCCAGCCAGACACCGGTGACCGCAATAGCCCTGCCGCCCAG CGTCAGGCTGGCCTACAAGATGACCGGTCAGGCCAAGGGCATGACCTACCACGCGAACGCCGAACTCGGCTGGCATCAGG CGGGCGGCAGCTATGACGCCCGCATGACCGTGAGCGCGCTGTTTCTGGGCTCGCGCAGCATGGCCAGCACTGGCCAGGTA GACGCCGGGGGGCTGGCGCCCACGCGCTTTTCGGACAAATCGAGAAGCGAAGTCGCCGCCCATTTCGAGGCCGACAAAGC CCGGATCACCTTCAGCGCCAATACGCCCGCCGTCCCCTGGATCAAGGGTGCCCAGGACCGGGTGAGCGTGTTTTTACAGC TGGGCGGCATGCTGGCCGGCAGCCCGGCCAGCTTTCCGGTGGGCTCCAGCATTTCGCTGTATACCGTGGGCCCGCGCGAC GCGGATACCTGGACCTTTCTGGTGGAGGCAGAGGAAAGCGTGAGCCTGCCCTTTGGGGACATCGTCGCCCTCAGGCTCAC GCGCCAGCCGCGCCGTGAATACGATCAGAAAGTGGAAGTCTGGTACGCGCCCTCACTGGGCTACCTGCCGGTGCGCAGCA AAATAACCCAGTACAACGGCGATTTTGTGGACCAGCAGCTCAATACCGTGAATAAATTCTGA
Upstream 100 bases:
>100_bases GCTCGCTGGCCACGTTTGATCCGGCCTGGGACGGTGCGGTGGCCCGACCACTGGCGGCAGCCGCCCGGCAACTTTCCAGC GATCTGGGGTTCACAGGGGC
Downstream 100 bases:
>100_bases AAACCGCTGCGCAAGTTGCCATAAAACGCCGTAGCGTGACTTCTTGCCTGCCTATGCGGCGTATTGCGGCTTACCCTGTC CTCTTGAAACCTGGCACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Proline-Rich Signal Peptide Protein; Prolin-Rich Protein
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MNSVLAAPGVASGVSRTAPPRRALGMLAVLVLAVHTLLLRTTPDRFGPETDPASTRSRAAPAFVTRSIEVPPPSKVLPPP AAPPAVKPVVKAPVKPKRPPVPVQENEAVAADSPAQPATDSVAPQAPDSLAVSESPAAPSADSVPLPAADTATASNSTAN TPPEATAPPPPAGASQTPVTAIALPPSVRLAYKMTGQAKGMTYHANAELGWHQAGGSYDARMTVSALFLGSRSMASTGQV DAGGLAPTRFSDKSRSEVAAHFEADKARITFSANTPAVPWIKGAQDRVSVFLQLGGMLAGSPASFPVGSSISLYTVGPRD ADTWTFLVEAEESVSLPFGDIVALRLTRQPRREYDQKVEVWYAPSLGYLPVRSKITQYNGDFVDQQLNTVNKF
Sequences:
>Translated_393_residues MNSVLAAPGVASGVSRTAPPRRALGMLAVLVLAVHTLLLRTTPDRFGPETDPASTRSRAAPAFVTRSIEVPPPSKVLPPP AAPPAVKPVVKAPVKPKRPPVPVQENEAVAADSPAQPATDSVAPQAPDSLAVSESPAAPSADSVPLPAADTATASNSTAN TPPEATAPPPPAGASQTPVTAIALPPSVRLAYKMTGQAKGMTYHANAELGWHQAGGSYDARMTVSALFLGSRSMASTGQV DAGGLAPTRFSDKSRSEVAAHFEADKARITFSANTPAVPWIKGAQDRVSVFLQLGGMLAGSPASFPVGSSISLYTVGPRD ADTWTFLVEAEESVSLPFGDIVALRLTRQPRREYDQKVEVWYAPSLGYLPVRSKITQYNGDFVDQQLNTVNKF >Mature_393_residues MNSVLAAPGVASGVSRTAPPRRALGMLAVLVLAVHTLLLRTTPDRFGPETDPASTRSRAAPAFVTRSIEVPPPSKVLPPP AAPPAVKPVVKAPVKPKRPPVPVQENEAVAADSPAQPATDSVAPQAPDSLAVSESPAAPSADSVPLPAADTATASNSTAN TPPEATAPPPPAGASQTPVTAIALPPSVRLAYKMTGQAKGMTYHANAELGWHQAGGSYDARMTVSALFLGSRSMASTGQV DAGGLAPTRFSDKSRSEVAAHFEADKARITFSANTPAVPWIKGAQDRVSVFLQLGGMLAGSPASFPVGSSISLYTVGPRD ADTWTFLVEAEESVSLPFGDIVALRLTRQPRREYDQKVEVWYAPSLGYLPVRSKITQYNGDFVDQQLNTVNKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41024; Mature: 41024
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSVLAAPGVASGVSRTAPPRRALGMLAVLVLAVHTLLLRTTPDRFGPETDPASTRSRAA CCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHCC PAFVTRSIEVPPPSKVLPPPAAPPAVKPVVKAPVKPKRPPVPVQENEAVAADSPAQPATD CCCEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SVAPQAPDSLAVSESPAAPSADSVPLPAADTATASNSTANTPPEATAPPPPAGASQTPVT CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE AIALPPSVRLAYKMTGQAKGMTYHANAELGWHQAGGSYDARMTVSALFLGSRSMASTGQV EEECCCCEEEEEEECCCCCCEEEECCCCCCEECCCCCCCCCEEEEEEEECCCCCCCCCCC DAGGLAPTRFSDKSRSEVAAHFEADKARITFSANTPAVPWIKGAQDRVSVFLQLGGMLAG CCCCCCCCCCCCCCHHHHHHHEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCC SPASFPVGSSISLYTVGPRDADTWTFLVEAEESVSLPFGDIVALRLTRQPRREYDQKVEV CCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCHHHHHCCEEEE WYAPSLGYLPVRSKITQYNGDFVDQQLNTVNKF EECCCCCCCCHHHHHHHCCCCHHHHHHHHHCCC >Mature Secondary Structure MNSVLAAPGVASGVSRTAPPRRALGMLAVLVLAVHTLLLRTTPDRFGPETDPASTRSRAA CCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHCC PAFVTRSIEVPPPSKVLPPPAAPPAVKPVVKAPVKPKRPPVPVQENEAVAADSPAQPATD CCCEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SVAPQAPDSLAVSESPAAPSADSVPLPAADTATASNSTANTPPEATAPPPPAGASQTPVT CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE AIALPPSVRLAYKMTGQAKGMTYHANAELGWHQAGGSYDARMTVSALFLGSRSMASTGQV EEECCCCEEEEEEECCCCCCEEEECCCCCCEECCCCCCCCCEEEEEEEECCCCCCCCCCC DAGGLAPTRFSDKSRSEVAAHFEADKARITFSANTPAVPWIKGAQDRVSVFLQLGGMLAG CCCCCCCCCCCCCCHHHHHHHEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCC SPASFPVGSSISLYTVGPRDADTWTFLVEAEESVSLPFGDIVALRLTRQPRREYDQKVEV CCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCHHHHHCCEEEE WYAPSLGYLPVRSKITQYNGDFVDQQLNTVNKF EECCCCCCCCHHHHHHHCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA