| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yhgN [C]
Identifier: 91786357
GI number: 91786357
Start: 464851
End: 465453
Strand: Reverse
Name: yhgN [C]
Synonym: Bpro_0447
Alternate gene names: 91786357
Gene position: 465453-464851 (Counterclockwise)
Preceding gene: 91786358
Following gene: 91786355
Centisome position: 8.95
GC content: 66.17
Gene sequence:
>603_bases ATGGCCTATACCTTTGCTTCAGCCACCGTCTTGCTGCTGCTGATCACGGATCCGCTGGGCAACATTCCCATCTTTGTCAA CGCCCTGCGCGGCGTGGCCCCCGAGCGCCGCATGCGCGTCGTCCTGCGGGAGGTGCTGATTGCCTTCCTGCTGCTGCTGG CCTTCATGTTTGTCGGCGACGGCTTTCTGCGCCTGATGAACCTGAGCGACCTGTCGCTGCAAATCGCCGGCGCCGTGGTG ATGTTCCTGATCGCGCTGCGCATGATTTTCCCCTCGGCCCAGCCGGAGGCCGCGCCCCTGCAGGGTGAGCCGCTGATCGT GCCGTTGGCCATCCCCGGGCTGGCCGGCCCCTCGGCGCTGGCCACGGTGATGCTGCTGGTCTCGCAGGCGCCGGCGCGGC GGCTGGAATGGATTGCCGCGCTGAGCGTGACCATGGTGGTCTGCGCGGTGGTGCTGGTACTGTCCGAGCGGATTCAGCGC ATCGCGGGCGACCGCGTCATGATGGCCTTTGAACGGCTGATGGGCCTGATCCTGGTGGCCATCTCGGTGGAAATGCTGCT GCGCGGCCTGAAACTCTTTGTGGCGCAGCTCGGCCAGCCGTAA
Upstream 100 bases:
>100_bases TCAAGGGCTTCCGCTCGCTGGAGGCGCTTTACGCCAGCTGAGCGTGACTGTGATGCCCCGGTTCACTCCCTGATCTTCAG CCACTCACCGCGCTGCCGCC
Downstream 100 bases:
>100_bases ACCCGCCCCTCCCCCGGCGGGGATTTCAGGTTGAATCGGGTTAACGCAGCGGCGCAACCTTCTGCTCAATCGCACCAAAC ACCGACAGCCCATCCTTGCC
Product: multiple antibiotic resistance (MarC)-like proteins
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MAYTFASATVLLLLITDPLGNIPIFVNALRGVAPERRMRVVLREVLIAFLLLLAFMFVGDGFLRLMNLSDLSLQIAGAVV MFLIALRMIFPSAQPEAAPLQGEPLIVPLAIPGLAGPSALATVMLLVSQAPARRLEWIAALSVTMVVCAVVLVLSERIQR IAGDRVMMAFERLMGLILVAISVEMLLRGLKLFVAQLGQP
Sequences:
>Translated_200_residues MAYTFASATVLLLLITDPLGNIPIFVNALRGVAPERRMRVVLREVLIAFLLLLAFMFVGDGFLRLMNLSDLSLQIAGAVV MFLIALRMIFPSAQPEAAPLQGEPLIVPLAIPGLAGPSALATVMLLVSQAPARRLEWIAALSVTMVVCAVVLVLSERIQR IAGDRVMMAFERLMGLILVAISVEMLLRGLKLFVAQLGQP >Mature_199_residues AYTFASATVLLLLITDPLGNIPIFVNALRGVAPERRMRVVLREVLIAFLLLLAFMFVGDGFLRLMNLSDLSLQIAGAVVM FLIALRMIFPSAQPEAAPLQGEPLIVPLAIPGLAGPSALATVMLLVSQAPARRLEWIAALSVTMVVCAVVLVLSERIQRI AGDRVMMAFERLMGLILVAISVEMLLRGLKLFVAQLGQP
Specific function: Unknown
COG id: COG2095
COG function: function code U; Multiple antibiotic transporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0056 (marC) family [H]
Homologues:
Organism=Escherichia coli, GI1789842, Length=190, Percent_Identity=44.2105263157895, Blast_Score=150, Evalue=6e-38, Organism=Escherichia coli, GI1787809, Length=196, Percent_Identity=25.5102040816327, Blast_Score=61, Evalue=5e-11, Organism=Escherichia coli, GI1787494, Length=190, Percent_Identity=24.7368421052632, Blast_Score=60, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002771 [H]
Pfam domain/function: PF01914 MarC [H]
EC number: NA
Molecular weight: Translated: 21617; Mature: 21486
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYTFASATVLLLLITDPLGNIPIFVNALRGVAPERRMRVVLREVLIAFLLLLAFMFVGD CCEEHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC GFLRLMNLSDLSLQIAGAVVMFLIALRMIFPSAQPEAAPLQGEPLIVPLAIPGLAGPSAL HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCHHHH ATVMLLVSQAPARRLEWIAALSVTMVVCAVVLVLSERIQRIAGDRVMMAFERLMGLILVA HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH ISVEMLLRGLKLFVAQLGQP HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AYTFASATVLLLLITDPLGNIPIFVNALRGVAPERRMRVVLREVLIAFLLLLAFMFVGD CEEHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC GFLRLMNLSDLSLQIAGAVVMFLIALRMIFPSAQPEAAPLQGEPLIVPLAIPGLAGPSAL HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCHHHH ATVMLLVSQAPARRLEWIAALSVTMVVCAVVLVLSERIQRIAGDRVMMAFERLMGLILVA HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH ISVEMLLRGLKLFVAQLGQP HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12522265 [H]