Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is gsiD [H]

Identifier: 91786292

GI number: 91786292

Start: 395281

End: 396216

Strand: Direct

Name: gsiD [H]

Synonym: Bpro_0382

Alternate gene names: 91786292

Gene position: 395281-396216 (Clockwise)

Preceding gene: 91786291

Following gene: 91786293

Centisome position: 7.6

GC content: 62.5

Gene sequence:

>936_bases
ATGGCGGCATTGACAGCTTCCTCTTCCGCTGATGCAGGCATTTCCAGTGCTTCAGCGGCCCCGGCGATGCCGTCGGCAAG
CCTGCCCGCGCAACGCTCGCGGGGCTACTGGACGGCGGCAATGCTGCGCTTTGTGCATGACCCGGTGGCGGTCGGTGCCG
TGCTTGTCGTGCTGATGCTGATTGCGATGGCCATCTTCGGCCCCTGGCTGGCACCGGCTGATCCCTACGACGCGTCCATG
CTGAAACGGCTCAAGCCGATCGGCACGGCAGGCTTGCCGCTGGGCAGCGACGAGCTTGGCCGCGATATGCTGTCGCGCCT
GATCATGGGTGCGCGGCTGTCACTCTTCATCGGCATCACGCCGGTAATCCTCGCATTTTTCACGGGCTCGGTGATCGGAA
TCGTGGCGGGCTATGCGGGCGGTATCGTCAACACCGCCATCATGCGCACGATTGATGTGTTCTATGCCTTTCCCTCGGTG
CTGCTCGCGATTGCGCTTTCAGGCGTGCTGGGAGCGGGCGTTGTCAATTCGCTGATCTCGCTGACCATTGTGTTTATTCC
GCAAATCGCGCGCGTCGCGGAGAGCGTAACCACCCAGGTGCGCGGACGCGACTACGTCGAGGCGGCGCGTGCATCGGGCG
CCAATGCGTTCACCATCGTGCGGGTGCATGTTCTCGGCAACGTGCTGGGGCCGATTTTTGTCTACGCCACCAGCCTGATT
GCCGTGTCGATGATCCTGGCTTCGGGCCTGTCGTTCCTCGGTCTGGGCGTGAAGCCGCCCGAGCCCGAGTGGGGACTGAT
GCTCAATACGCTGCGAACAGCGCTGTATGTCCAGCCGTGGGTCGCCGCGCTTCCGGGGGTGATGATCTTCATCACATCCA
TTGCATTCAATATTCTGTCCGACGGTCTGCGTTCGGCCATGGACAACAAGGGCTGA

Upstream 100 bases:

>100_bases
CTCTTCTTTGTACTGCTCAATTTTCTGGTCGATGTATTGCAGACCCTGCTCGACCCGCGTATTGCACGCACCTGAGAAGC
GAAAAACACCAAGGACGAAC

Downstream 100 bases:

>100_bases
CATGATGCAACAAACACCTGATGTCGGCGGTCCGGCCCAGCCCCTGCTCACTATCCGCGGGCTGCAAAAGCACTTTGCGA
TCAAGGGCGGGCCGCTCGGC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MAALTASSSADAGISSASAAPAMPSASLPAQRSRGYWTAAMLRFVHDPVAVGAVLVVLMLIAMAIFGPWLAPADPYDASM
LKRLKPIGTAGLPLGSDELGRDMLSRLIMGARLSLFIGITPVILAFFTGSVIGIVAGYAGGIVNTAIMRTIDVFYAFPSV
LLAIALSGVLGAGVVNSLISLTIVFIPQIARVAESVTTQVRGRDYVEAARASGANAFTIVRVHVLGNVLGPIFVYATSLI
AVSMILASGLSFLGLGVKPPEPEWGLMLNTLRTALYVQPWVAALPGVMIFITSIAFNILSDGLRSAMDNKG

Sequences:

>Translated_311_residues
MAALTASSSADAGISSASAAPAMPSASLPAQRSRGYWTAAMLRFVHDPVAVGAVLVVLMLIAMAIFGPWLAPADPYDASM
LKRLKPIGTAGLPLGSDELGRDMLSRLIMGARLSLFIGITPVILAFFTGSVIGIVAGYAGGIVNTAIMRTIDVFYAFPSV
LLAIALSGVLGAGVVNSLISLTIVFIPQIARVAESVTTQVRGRDYVEAARASGANAFTIVRVHVLGNVLGPIFVYATSLI
AVSMILASGLSFLGLGVKPPEPEWGLMLNTLRTALYVQPWVAALPGVMIFITSIAFNILSDGLRSAMDNKG
>Mature_310_residues
AALTASSSADAGISSASAAPAMPSASLPAQRSRGYWTAAMLRFVHDPVAVGAVLVVLMLIAMAIFGPWLAPADPYDASML
KRLKPIGTAGLPLGSDELGRDMLSRLIMGARLSLFIGITPVILAFFTGSVIGIVAGYAGGIVNTAIMRTIDVFYAFPSVL
LAIALSGVLGAGVVNSLISLTIVFIPQIARVAESVTTQVRGRDYVEAARASGANAFTIVRVHVLGNVLGPIFVYATSLIA
VSMILASGLSFLGLGVKPPEPEWGLMLNTLRTALYVQPWVAALPGVMIFITSIAFNILSDGLRSAMDNKG

Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=289, Percent_Identity=40.8304498269896, Blast_Score=204, Evalue=6e-54,
Organism=Escherichia coli, GI1787760, Length=286, Percent_Identity=34.2657342657343, Blast_Score=181, Evalue=4e-47,
Organism=Escherichia coli, GI1789964, Length=291, Percent_Identity=36.426116838488, Blast_Score=153, Evalue=1e-38,
Organism=Escherichia coli, GI1789889, Length=241, Percent_Identity=38.5892116182573, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI1787498, Length=279, Percent_Identity=31.8996415770609, Blast_Score=138, Evalue=4e-34,
Organism=Escherichia coli, GI1787549, Length=291, Percent_Identity=30.5841924398625, Blast_Score=128, Evalue=6e-31,
Organism=Escherichia coli, GI1788505, Length=221, Percent_Identity=28.5067873303167, Blast_Score=76, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32334; Mature: 32202

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHCCCC
>Mature Secondary Structure 
AALTASSSADAGISSASAAPAMPSASLPAQRSRGYWTAAMLRFVHDPVAVGAVLVVLML
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH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HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA