Click here to switch to the map view.

The map label for this gene is hipB [C]

Identifier: 91786249

GI number: 91786249

Start: 359451

End: 359966

Strand: Reverse

Name: hipB [C]

Synonym: Bpro_0338

Alternate gene names: 91786249

Gene position: 359966-359451 (Counterclockwise)

Preceding gene: 91786250

Following gene: 91786248

Centisome position: 6.92

GC content: 63.76

Gene sequence:

>516_bases
ATGCACATGGACTTCCCCATCCACCTGACCAGCCAGCTTCGTGAGCACCTGCGTTCGCTCAGGAAGACGCACGGCCTAAC
CCAGGCCGCACTCGGACGGCTGCTCGGCGTCGGGCAGGCCCGTGTCGCGGAGATCGAAAACAATCCAGGCGCCGTGAGCG
TCGACCAGTTGATGAAGGTGCTCTCAGCGCTGCGCGCCTCCCTGGTGTTGAGGGACGACGTTGTCGAGGTGGTCGCGGAC
CGACCGAATGCGGCAGCCTTGCATGCCACCCCCCAGGCAAGTAAGCCCAAAAAACCTGCCAAGCAACCGTCGGTCAATAT
CCCGCCGACGGGCCAGTGGCGCACGGTGCCCTTGACCGGAGGCGGCGGGCACCCAGCGAAGTCGGTTCTAGTCAGTCGCA
GCGACACAAAAACCCCGTCGGACGCGCAAGCGCTGCGGGATGCGAATCCACACGCCGATGTCACAGCAACATCCAAGCGC
AACTTCGTCATCCGGCCTAAGAAAGGCTCGTGGTGA

Upstream 100 bases:

>100_bases
AGCGATATATCGCATATCTCCGATAAATCAACTTCATACACCAAAGCAAGTATCTTGCATAAACTTGCTTTGACATATAT
ATTGGTGTTTCCCGATAGAG

Downstream 100 bases:

>100_bases
TGGCGGCGCTCAACGCGTGGATGAATGGCGAATTCGTCGGTGCCTGGCAGGTCAACCGCGGAACCCACAACTTTTCGTAC
GCACCGTCATGGCTGGAGTC

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Transcription Regulator Protein

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MHMDFPIHLTSQLREHLRSLRKTHGLTQAALGRLLGVGQARVAEIENNPGAVSVDQLMKVLSALRASLVLRDDVVEVVAD
RPNAAALHATPQASKPKKPAKQPSVNIPPTGQWRTVPLTGGGGHPAKSVLVSRSDTKTPSDAQALRDANPHADVTATSKR
NFVIRPKKGSW

Sequences:

>Translated_171_residues
MHMDFPIHLTSQLREHLRSLRKTHGLTQAALGRLLGVGQARVAEIENNPGAVSVDQLMKVLSALRASLVLRDDVVEVVAD
RPNAAALHATPQASKPKKPAKQPSVNIPPTGQWRTVPLTGGGGHPAKSVLVSRSDTKTPSDAQALRDANPHADVTATSKR
NFVIRPKKGSW
>Mature_171_residues
MHMDFPIHLTSQLREHLRSLRKTHGLTQAALGRLLGVGQARVAEIENNPGAVSVDQLMKVLSALRASLVLRDDVVEVVAD
RPNAAALHATPQASKPKKPAKQPSVNIPPTGQWRTVPLTGGGGHPAKSVLVSRSDTKTPSDAQALRDANPHADVTATSKR
NFVIRPKKGSW

Specific function: Binds To Operator Sites With The Consensus Sequence 5-'Tatccn(8)GGATA-3' And Repress The Hip Operon Promoter. [C]

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18356; Mature: 18356

Theoretical pI: Translated: 11.44; Mature: 11.44

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHMDFPIHLTSQLREHLRSLRKTHGLTQAALGRLLGVGQARVAEIENNPGAVSVDQLMKV
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHEEEECCCCCEECHHHHHHH
LSALRASLVLRDDVVEVVADRPNAAALHATPQASKPKKPAKQPSVNIPPTGQWRTVPLTG
HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC
GGGHPAKSVLVSRSDTKTPSDAQALRDANPHADVTATSKRNFVIRPKKGSW
CCCCHHHHEEEECCCCCCCCHHHHHHCCCCCCCEEECCCCCEEEECCCCCC
>Mature Secondary Structure
MHMDFPIHLTSQLREHLRSLRKTHGLTQAALGRLLGVGQARVAEIENNPGAVSVDQLMKV
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHEEEECCCCCEECHHHHHHH
LSALRASLVLRDDVVEVVADRPNAAALHATPQASKPKKPAKQPSVNIPPTGQWRTVPLTG
HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC
GGGHPAKSVLVSRSDTKTPSDAQALRDANPHADVTATSKRNFVIRPKKGSW
CCCCHHHHEEEECCCCCCCCHHHHHHCCCCCCCEEECCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA