Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is arcB [C]

Identifier: 91786139

GI number: 91786139

Start: 248490

End: 250115

Strand: Reverse

Name: arcB [C]

Synonym: Bpro_0228

Alternate gene names: 91786139

Gene position: 250115-248490 (Counterclockwise)

Preceding gene: 91786140

Following gene: 91786138

Centisome position: 4.81

GC content: 64.02

Gene sequence:

>1626_bases
ATGGCCGGAGATACGGATTTCCAGTCCCGGCTGCGGGCCATCCGCGCGGGCGGTGTCGGCTATTTCCCCGCCCCGCTGGA
TGTACGTTCGCTGCTCGGTTTTCTGGGCCGCATTACCTCCGACGAGCCGTCCAGGCCCTACCGCGTGCTGATCATCGAGG
ATGATGAAAGCCTGGCGGGCTTTTATGCCGAGGTGCTGCAATCGGCCGGCATGGAAACCGCCATCGTGACCGACCCCACC
ACCGTGACGGGTCTGCTCACGGCATTCCGCCCTGACCTCATCACCTGCGACCTCTACATGCCCGACTGCAACGGCATGGA
ACTGGCCGCACTGATTCGCCAGCAGGAAGAGTTTGTCCGCATCCCCATCGTCTTTCTGTCAACAGAGACCAGCTTGGACA
AGCAGTCACAGGCGCTCAAGCAAGGCGGCGACGACTTCATCATCAAGCCTGTCGAGCCAGCCAACCTGATCTCGGCGGTG
CAAAGCCGGGCCCGTCGCTACCGCAGCCTGCTGGCCGCGGAAGACACGCTGCGCATCAGTGAAGAGCGCTTTCGCCTGGT
CTTTGAAAGCAGCCTGGATGGCTTCATCCAGACGCTGGCAGACGGCACCATTGTTTCGGCCAACCAGGCCGCCTGCCACA
TGTTTGACATGACGGAGCAGGACTTGCGCCGCGCCGGGCTTGCCGGCCTCGTGGACGGCGCTGACCCGCGGCTGCAGGAT
ATGCGGGGCAGTCCCGAGAAATACCGGGGCGAGCTCCTTTGCGTGCGCCGCGGCGGCGTGAAATTCCCTGTCGAAATTTC
AGCGTCGCAACACCTCAGCAGCAACGGCGATGTCCAGGGCAGCATCATCGTGCGTGACATCACCGAGCGAAAATCCGCCG
AGGAAAGCATCTTGCGGCTCAACGCCGAACTTGAACAACGGGTGGAACGGCGAACCGCTGCGCTGACGGCGGCCAACCAG
GAACTGCAGGCTTTTTCGCATTCGCTGGCCCACGACCTGCGGCAACCCTATATTGCCATCAATGGCCTGGCGAGCCTGCT
GGAGCGGGAAATGGCGGCCCACCTGACGGCGCGCGGCAAGGATTACCTGAACCGCATACGCGCCGGCGTCAGCCAGATGA
ACGACCGCACCGACAGCCTGCTGTCGCTGGCCCAGCTGTCGCAGGCGACGACCCGACCCGAAAAGGTGGACCTGGCGGCA
ATCTGCACCGCCGTGCTGGCCACGCTTCAGGCCAAGGAGCCGGGGCGCCAGGTTCAAACCGAGGTCGAGGCGCCGCTGGA
AGCCGACGGCGATGCCAGCCTGCTCCAGCACCTGCTCGGGCATTTGCTGGGCAACGCCTGGAAATTCACGTCCCGGCAGG
CCAGCGCCGTCATCCGCGTCAGCAGCCAGACCGACGTTGGCGGAAAAACGGTTTACTGCGTCGCGGACAATGGCGCCGGT
TTTGAAATGGCCTATGTCGACAAGCTGTTTGGCGCCTTCCAGCGGTTGCATTCCCCCTCGGAGTTTTCAGGCGCCGGCAT
TGGCTTGGCGATGGCGCACCGCATCGTCACGCGGCATGGCGGACGGATCTGGGCCGAATCGGCGCCCGGTCAGGGCGCGC
GCTTTTACTTCACGCTGGGCGGTTAG

Upstream 100 bases:

>100_bases
GCAGCGATCCTGGCCAACGTGGGCCTGCCCGAGGAGGAGCAGCTGGTGCTGCGCGCGCTGGCCCGGCCCTGGCGCATCGG
CGGCGGTGCCGCTGATCTTC

Downstream 100 bases:

>100_bases
GGCTCGTTTGGGAATAGGTTGTGCATTTGGCCGTCGGATTCGGGATGCGCTGCCAGGCGCGGGGAGCGCCGTGTGGCCAG
CCCACACAAGCGAGTCGCAA

Product: multi-sensor signal transduction histidine kinase

Products: NA

Alternate protein names: ORF5 [H]

Number of amino acids: Translated: 541; Mature: 540

Protein sequence:

>541_residues
MAGDTDFQSRLRAIRAGGVGYFPAPLDVRSLLGFLGRITSDEPSRPYRVLIIEDDESLAGFYAEVLQSAGMETAIVTDPT
TVTGLLTAFRPDLITCDLYMPDCNGMELAALIRQQEEFVRIPIVFLSTETSLDKQSQALKQGGDDFIIKPVEPANLISAV
QSRARRYRSLLAAEDTLRISEERFRLVFESSLDGFIQTLADGTIVSANQAACHMFDMTEQDLRRAGLAGLVDGADPRLQD
MRGSPEKYRGELLCVRRGGVKFPVEISASQHLSSNGDVQGSIIVRDITERKSAEESILRLNAELEQRVERRTAALTAANQ
ELQAFSHSLAHDLRQPYIAINGLASLLEREMAAHLTARGKDYLNRIRAGVSQMNDRTDSLLSLAQLSQATTRPEKVDLAA
ICTAVLATLQAKEPGRQVQTEVEAPLEADGDASLLQHLLGHLLGNAWKFTSRQASAVIRVSSQTDVGGKTVYCVADNGAG
FEMAYVDKLFGAFQRLHSPSEFSGAGIGLAMAHRIVTRHGGRIWAESAPGQGARFYFTLGG

Sequences:

>Translated_541_residues
MAGDTDFQSRLRAIRAGGVGYFPAPLDVRSLLGFLGRITSDEPSRPYRVLIIEDDESLAGFYAEVLQSAGMETAIVTDPT
TVTGLLTAFRPDLITCDLYMPDCNGMELAALIRQQEEFVRIPIVFLSTETSLDKQSQALKQGGDDFIIKPVEPANLISAV
QSRARRYRSLLAAEDTLRISEERFRLVFESSLDGFIQTLADGTIVSANQAACHMFDMTEQDLRRAGLAGLVDGADPRLQD
MRGSPEKYRGELLCVRRGGVKFPVEISASQHLSSNGDVQGSIIVRDITERKSAEESILRLNAELEQRVERRTAALTAANQ
ELQAFSHSLAHDLRQPYIAINGLASLLEREMAAHLTARGKDYLNRIRAGVSQMNDRTDSLLSLAQLSQATTRPEKVDLAA
ICTAVLATLQAKEPGRQVQTEVEAPLEADGDASLLQHLLGHLLGNAWKFTSRQASAVIRVSSQTDVGGKTVYCVADNGAG
FEMAYVDKLFGAFQRLHSPSEFSGAGIGLAMAHRIVTRHGGRIWAESAPGQGARFYFTLGG
>Mature_540_residues
AGDTDFQSRLRAIRAGGVGYFPAPLDVRSLLGFLGRITSDEPSRPYRVLIIEDDESLAGFYAEVLQSAGMETAIVTDPTT
VTGLLTAFRPDLITCDLYMPDCNGMELAALIRQQEEFVRIPIVFLSTETSLDKQSQALKQGGDDFIIKPVEPANLISAVQ
SRARRYRSLLAAEDTLRISEERFRLVFESSLDGFIQTLADGTIVSANQAACHMFDMTEQDLRRAGLAGLVDGADPRLQDM
RGSPEKYRGELLCVRRGGVKFPVEISASQHLSSNGDVQGSIIVRDITERKSAEESILRLNAELEQRVERRTAALTAANQE
LQAFSHSLAHDLRQPYIAINGLASLLEREMAAHLTARGKDYLNRIRAGVSQMNDRTDSLLSLAQLSQATTRPEKVDLAAI
CTAVLATLQAKEPGRQVQTEVEAPLEADGDASLLQHLLGHLLGNAWKFTSRQASAVIRVSSQTDVGGKTVYCVADNGAGF
EMAYVDKLFGAFQRLHSPSEFSGAGIGLAMAHRIVTRHGGRIWAESAPGQGARFYFTLGG

Specific function: Member Of The Two-Component Regulatory System Arcb/Arca. Sensor-Regulator Protein For Anaerobic Repression Of The Arc Modulon. Activates Arca Via A Four-Step Phosphorelay. Arcb Can Also Dephosphorylate Arca By A Reverse Phosphorelay Involving His- 717 And

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 response regulatory domains [H]

Homologues:

Organism=Escherichia coli, GI48994928, Length=266, Percent_Identity=28.1954887218045, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1788549, Length=370, Percent_Identity=24.5945945945946, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI145693157, Length=401, Percent_Identity=25.6857855361596, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1786912, Length=223, Percent_Identity=29.1479820627803, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1787894, Length=260, Percent_Identity=26.9230769230769, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1789149, Length=227, Percent_Identity=24.2290748898678, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1788394, Length=183, Percent_Identity=27.3224043715847, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI1787487, Length=114, Percent_Identity=29.8245614035088, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1786600, Length=220, Percent_Identity=26.3636363636364, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR011006
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF00072 Response_reg [H]

EC number: 2.7.3.- [C]

Molecular weight: Translated: 58988; Mature: 58856

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGDTDFQSRLRAIRAGGVGYFPAPLDVRSLLGFLGRITSDEPSRPYRVLIIEDDESLAG
CCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHH
FYAEVLQSAGMETAIVTDPTTVTGLLTAFRPDLITCDLYMPDCNGMELAALIRQQEEFVR
HHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHEE
IPIVFLSTETSLDKQSQALKQGGDDFIIKPVEPANLISAVQSRARRYRSLLAAEDTLRIS
EEEEEEECCCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EERFRLVFESSLDGFIQTLADGTIVSANQAACHMFDMTEQDLRRAGLAGLVDGADPRLQD
HHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHCCCHHHHHHHCCHHCCCCCCCHHHH
MRGSPEKYRGELLCVRRGGVKFPVEISASQHLSSNGDVQGSIIVRDITERKSAEESILRL
CCCCCHHHCCCEEEEECCCEEEEEEECCHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHHH
NAELEQRVERRTAALTAANQELQAFSHSLAHDLRQPYIAINGLASLLEREMAAHLTARGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHCCH
DYLNRIRAGVSQMNDRTDSLLSLAQLSQATTRPEKVDLAAICTAVLATLQAKEPGRQVQT
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHH
EVEAPLEADGDASLLQHLLGHLLGNAWKFTSRQASAVIRVSSQTDVGGKTVYCVADNGAG
HHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCC
FEMAYVDKLFGAFQRLHSPSEFSGAGIGLAMAHRIVTRHGGRIWAESAPGQGARFYFTLG
CHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEC
G
C
>Mature Secondary Structure 
AGDTDFQSRLRAIRAGGVGYFPAPLDVRSLLGFLGRITSDEPSRPYRVLIIEDDESLAG
CCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHH
FYAEVLQSAGMETAIVTDPTTVTGLLTAFRPDLITCDLYMPDCNGMELAALIRQQEEFVR
HHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHEE
IPIVFLSTETSLDKQSQALKQGGDDFIIKPVEPANLISAVQSRARRYRSLLAAEDTLRIS
EEEEEEECCCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EERFRLVFESSLDGFIQTLADGTIVSANQAACHMFDMTEQDLRRAGLAGLVDGADPRLQD
HHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHCCCHHHHHHHCCHHCCCCCCCHHHH
MRGSPEKYRGELLCVRRGGVKFPVEISASQHLSSNGDVQGSIIVRDITERKSAEESILRL
CCCCCHHHCCCEEEEECCCEEEEEEECCHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHHH
NAELEQRVERRTAALTAANQELQAFSHSLAHDLRQPYIAINGLASLLEREMAAHLTARGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHCCH
DYLNRIRAGVSQMNDRTDSLLSLAQLSQATTRPEKVDLAAICTAVLATLQAKEPGRQVQT
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHH
EVEAPLEADGDASLLQHLLGHLLGNAWKFTSRQASAVIRVSSQTDVGGKTVYCVADNGAG
HHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCC
FEMAYVDKLFGAFQRLHSPSEFSGAGIGLAMAHRIVTRHGGRIWAESAPGQGARFYFTLG
CHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEC
G
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferring phosphorus-containing groups [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7763384 [H]