| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is pckG [H]
Identifier: 91786071
GI number: 91786071
Start: 171455
End: 173323
Strand: Reverse
Name: pckG [H]
Synonym: Bpro_0160
Alternate gene names: 91786071
Gene position: 173323-171455 (Counterclockwise)
Preceding gene: 91786076
Following gene: 91786069
Centisome position: 3.33
GC content: 63.67
Gene sequence:
>1869_bases ATGAACCACCCCGTGATGCAAGGACTGGAACTGGGCACGCCCGGCTATGTCAAGAACGCAAAACTGATTGCCTGGGTTGC CGACATGGTGGCCCTGTGCAAACCCGACCGCGTGTACTGGTGCGACGGCAGCGACGCCGAATACCAGCGCCTGTGCCAGC AGCTGGTCGATGCCGGCACCTTCAAAAAGCTCAACGAAACCAAGCGCCCCAACAGCTTCCTGGCGCTGAGCGACCCCTCC GACGTGGCGCGCGTGGAAGACCGCACCTACATCTGCTCGGCCCGCAAGGAAGACGCCGGCCCGACCAACAACTGGATGGC CCCGGCCGAGATGCGCGCCACGCTGCAGCCGCTGTTTGACGGCTGCATGCAGGGCCGCACCATGTATGTGGTGCCTTTCA GCATGGGCCCGCTGGGCTCGCCGATTGCACACATCGGCGTCGAGCTGTCGGACAGCCCTTATGTGGCTGTCAACATGAAG ATCATGACGCGCATGGGCAAGGCGGTGTTCGACGTGCTGGGCGTCAATGGCGACTTCGTGCCCTGCGTACACACCGTGGG CGCGCCGTTGGCCGCCGGCCAGAAAGACGTGACATGGCCGTGCAACAAGACCAAATACATCGTGCACTACCCGGAGACCC GCGAAATCTGGTCCTACGGTTCGGGCTACGGCGGCAATGCGCTGCTGGGCAAGAAGTGCTTTGCGCTGCGTATCGCGTCC AACATGGGCCGCGACGAGGGCTGGCTGGCCGAGCACATGCTGATTCTCGGCGTGACCAACCCTGAGGGCAAGAAATACCA TGTCGCAGCGGCCTTCCCGTCGGCTTGCGGCAAGACCAACTTCTCCATGCTGGTGCCACCCGCCGGCTTTGACGGCTGGA AAGTCACCACCATCGGCGACGACATCGCCTGGATCAAGCCCGCGGCCGACGGCAAGCTGTATGCCATCAACCCGGAAGCC GGCTACTTCGGCGTGGCGCCCGGCACCAACATGCTGACCAACCCGAACTGCATGCGCAGCCTGGACCGCGACACGATTTT CACCAACGTCGGGCTGACCGACGATGGCGACGTGTGGTGGGAGGGCATGGAGCAGGATGCACCCGGCAAGGCACTGCCGG CCCACCTGATCGACTGGCAGGGCAATGACTGGACACCCCAGATTGCCAAGGAAACCGGCGCCAAGGCCGCACATCCCAAT TCACGCTTTACCGTGGCCGCGACCAACAATCCGGCGCTCGACAGCGCCTGGGACGACCCGAAAGGCGTGGCGATCGACGC CTTCATCTTCGGCGGCCGCCGCTCGACCACCGTGCCGCTGGTGACCGAGGCGCGCAACTGGGTGGAAGGCGTCTACATGG CCGCCACCATGGGCTCCGAAACCACGGCTGCCGCGACCGGCCAGGCCGGTGTGGTGCGCCGCGACCCGTTCGCCATGCTG CCGTTTACCGGCTACAACATGAGCGACTACTTCCAGCACTGGCTGGATATGGGTCAGAAGCTCGCCGGTTCCGGCGCCAA ACTACCGAAAATCTACACCACCAACTGGTTCCGCAAAGGTGCGGATGGCAAATTCGTCTGGCCTGGCTACGGTGAGAACA TGCGCGTGCTGAAGTGGATGATTGACCGCATCGAAGGCAGCGGCCAGGGCAATGACCACATCACCGGCGTCAGCCCCAGC TACGAAGACCTGAACTGGACCGGCCTCGACTTCAGCGCCGAGCAGTTCGACAGCGTGATCAGCATGGACAAGGCCGCCTG GCTCAAGGAGCTGGAGCTGCACGCCGAACTGTTCAAGCAGCTTGAACACCACCTGCCGAAAGAACTGGACCAGACCATGT CCGCCATCGAGCGCCGGCTGGCGGCCTGA
Upstream 100 bases:
>100_bases GCCATTTCGACAGACGCCCGATGTCGCAGCAACTGCCGCCGCAATTGCCCACATTCACCGGCGTTTATCGAAATAACGTT TTTCAACTTTGGAGTTTTCA
Downstream 100 bases:
>100_bases CATCCGCCCGCGCCCGGGCGCCTTGGCGCCCGGGCTGTCTCTGGCACTTTGACGTTTCGACAAGCTGGAGCCAGACGAAA AAAAGCCACCTCATGAGGTG
Product: phosphoenolpyruvate carboxykinase
Products: NA
Alternate protein names: PEP carboxykinase; PEPCK; Phosphoenolpyruvate carboxylase [H]
Number of amino acids: Translated: 622; Mature: 622
Protein sequence:
>622_residues MNHPVMQGLELGTPGYVKNAKLIAWVADMVALCKPDRVYWCDGSDAEYQRLCQQLVDAGTFKKLNETKRPNSFLALSDPS DVARVEDRTYICSARKEDAGPTNNWMAPAEMRATLQPLFDGCMQGRTMYVVPFSMGPLGSPIAHIGVELSDSPYVAVNMK IMTRMGKAVFDVLGVNGDFVPCVHTVGAPLAAGQKDVTWPCNKTKYIVHYPETREIWSYGSGYGGNALLGKKCFALRIAS NMGRDEGWLAEHMLILGVTNPEGKKYHVAAAFPSACGKTNFSMLVPPAGFDGWKVTTIGDDIAWIKPAADGKLYAINPEA GYFGVAPGTNMLTNPNCMRSLDRDTIFTNVGLTDDGDVWWEGMEQDAPGKALPAHLIDWQGNDWTPQIAKETGAKAAHPN SRFTVAATNNPALDSAWDDPKGVAIDAFIFGGRRSTTVPLVTEARNWVEGVYMAATMGSETTAAATGQAGVVRRDPFAML PFTGYNMSDYFQHWLDMGQKLAGSGAKLPKIYTTNWFRKGADGKFVWPGYGENMRVLKWMIDRIEGSGQGNDHITGVSPS YEDLNWTGLDFSAEQFDSVISMDKAAWLKELELHAELFKQLEHHLPKELDQTMSAIERRLAA
Sequences:
>Translated_622_residues MNHPVMQGLELGTPGYVKNAKLIAWVADMVALCKPDRVYWCDGSDAEYQRLCQQLVDAGTFKKLNETKRPNSFLALSDPS DVARVEDRTYICSARKEDAGPTNNWMAPAEMRATLQPLFDGCMQGRTMYVVPFSMGPLGSPIAHIGVELSDSPYVAVNMK IMTRMGKAVFDVLGVNGDFVPCVHTVGAPLAAGQKDVTWPCNKTKYIVHYPETREIWSYGSGYGGNALLGKKCFALRIAS NMGRDEGWLAEHMLILGVTNPEGKKYHVAAAFPSACGKTNFSMLVPPAGFDGWKVTTIGDDIAWIKPAADGKLYAINPEA GYFGVAPGTNMLTNPNCMRSLDRDTIFTNVGLTDDGDVWWEGMEQDAPGKALPAHLIDWQGNDWTPQIAKETGAKAAHPN SRFTVAATNNPALDSAWDDPKGVAIDAFIFGGRRSTTVPLVTEARNWVEGVYMAATMGSETTAAATGQAGVVRRDPFAML PFTGYNMSDYFQHWLDMGQKLAGSGAKLPKIYTTNWFRKGADGKFVWPGYGENMRVLKWMIDRIEGSGQGNDHITGVSPS YEDLNWTGLDFSAEQFDSVISMDKAAWLKELELHAELFKQLEHHLPKELDQTMSAIERRLAA >Mature_622_residues MNHPVMQGLELGTPGYVKNAKLIAWVADMVALCKPDRVYWCDGSDAEYQRLCQQLVDAGTFKKLNETKRPNSFLALSDPS DVARVEDRTYICSARKEDAGPTNNWMAPAEMRATLQPLFDGCMQGRTMYVVPFSMGPLGSPIAHIGVELSDSPYVAVNMK IMTRMGKAVFDVLGVNGDFVPCVHTVGAPLAAGQKDVTWPCNKTKYIVHYPETREIWSYGSGYGGNALLGKKCFALRIAS NMGRDEGWLAEHMLILGVTNPEGKKYHVAAAFPSACGKTNFSMLVPPAGFDGWKVTTIGDDIAWIKPAADGKLYAINPEA GYFGVAPGTNMLTNPNCMRSLDRDTIFTNVGLTDDGDVWWEGMEQDAPGKALPAHLIDWQGNDWTPQIAKETGAKAAHPN SRFTVAATNNPALDSAWDDPKGVAIDAFIFGGRRSTTVPLVTEARNWVEGVYMAATMGSETTAAATGQAGVVRRDPFAML PFTGYNMSDYFQHWLDMGQKLAGSGAKLPKIYTTNWFRKGADGKFVWPGYGENMRVLKWMIDRIEGSGQGNDHITGVSPS YEDLNWTGLDFSAEQFDSVISMDKAAWLKELELHAELFKQLEHHLPKELDQTMSAIERRLAA
Specific function: Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle [H]
COG id: COG1274
COG function: function code C; Phosphoenolpyruvate carboxykinase (GTP)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoenolpyruvate carboxykinase [GTP] family [H]
Homologues:
Organism=Homo sapiens, GI187281517, Length=628, Percent_Identity=47.6114649681529, Blast_Score=584, Evalue=1e-167, Organism=Homo sapiens, GI66346721, Length=609, Percent_Identity=48.9326765188834, Blast_Score=575, Evalue=1e-164, Organism=Homo sapiens, GI66346723, Length=380, Percent_Identity=51.8421052631579, Blast_Score=389, Evalue=1e-108, Organism=Caenorhabditis elegans, GI71989645, Length=614, Percent_Identity=45.2768729641694, Blast_Score=539, Evalue=1e-153, Organism=Caenorhabditis elegans, GI71989658, Length=614, Percent_Identity=45.2768729641694, Blast_Score=538, Evalue=1e-153, Organism=Caenorhabditis elegans, GI17555492, Length=623, Percent_Identity=46.2279293739968, Blast_Score=535, Evalue=1e-152, Organism=Caenorhabditis elegans, GI71989653, Length=600, Percent_Identity=45.6666666666667, Blast_Score=531, Evalue=1e-151, Organism=Caenorhabditis elegans, GI32564411, Length=563, Percent_Identity=49.0230905861456, Blast_Score=527, Evalue=1e-150, Organism=Caenorhabditis elegans, GI32564407, Length=531, Percent_Identity=48.7758945386064, Blast_Score=491, Evalue=1e-139, Organism=Caenorhabditis elegans, GI71989649, Length=489, Percent_Identity=48.2617586912065, Blast_Score=473, Evalue=1e-133, Organism=Caenorhabditis elegans, GI32564409, Length=377, Percent_Identity=44.2970822281167, Blast_Score=298, Evalue=5e-81, Organism=Caenorhabditis elegans, GI17540956, Length=549, Percent_Identity=26.0473588342441, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI24655085, Length=609, Percent_Identity=48.9326765188834, Blast_Score=584, Evalue=1e-167, Organism=Drosophila melanogaster, GI24655082, Length=609, Percent_Identity=48.2758620689655, Blast_Score=573, Evalue=1e-163, Organism=Drosophila melanogaster, GI161077226, Length=566, Percent_Identity=49.2932862190813, Blast_Score=547, Evalue=1e-155, Organism=Drosophila melanogaster, GI24655088, Length=513, Percent_Identity=50.0974658869396, Blast_Score=506, Evalue=1e-143,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018091 - InterPro: IPR013035 - InterPro: IPR008209 - InterPro: IPR008210 [H]
Pfam domain/function: PF00821 PEPCK [H]
EC number: =4.1.1.32 [H]
Molecular weight: Translated: 68300; Mature: 68300
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: PS00505 PEPCK_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHPVMQGLELGTPGYVKNAKLIAWVADMVALCKPDRVYWCDGSDAEYQRLCQQLVDAGT CCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCC FKKLNETKRPNSFLALSDPSDVARVEDRTYICSARKEDAGPTNNWMAPAEMRATLQPLFD HHHHHHCCCCCCEEEECCCCHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH GCMQGRTMYVVPFSMGPLGSPIAHIGVELSDSPYVAVNMKIMTRMGKAVFDVLGVNGDFV HHHCCCEEEEEEECCCCCCCCHHHEEEEECCCCEEEEEHHHHHHHHHHHHHHHCCCCCEE PCVHTVGAPLAAGQKDVTWPCNKTKYIVHYPETREIWSYGSGYGGNALLGKKCFALRIAS HHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHCCCCCCCCCCCCCCHHEEEEEHH NMGRDEGWLAEHMLILGVTNPEGKKYHVAAAFPSACGKTNFSMLVPPAGFDGWKVTTIGD HCCCCCCHHEEEEEEEEEECCCCCEEEEEEECCHHCCCCCCEEEECCCCCCCEEEEEECC DIAWIKPAADGKLYAINPEAGYFGVAPGTNMLTNPNCMRSLDRDTIFTNVGLTDDGDVWW CCEEEEECCCCEEEEECCCCCEEECCCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCHHH EGMEQDAPGKALPAHLIDWQGNDWTPQIAKETGAKAAHPNSRFTVAATNNPALDSAWDDP CCCCCCCCCCCCCCEEEECCCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCC KGVAIDAFIFGGRRSTTVPLVTEARNWVEGVYMAATMGSETTAAATGQAGVVRRDPFAML CCCEEEEEEECCCCCCEEEEHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCEECCCEEEE PFTGYNMSDYFQHWLDMGQKLAGSGAKLPKIYTTNWFRKGADGKFVWPGYGENMRVLKWM CCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEECCCCCCCHHHHHHH IDRIEGSGQGNDHITGVSPSYEDLNWTGLDFSAEQFDSVISMDKAAWLKELELHAELFKQ HHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEHHLPKELDQTMSAIERRLAA HHHHCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNHPVMQGLELGTPGYVKNAKLIAWVADMVALCKPDRVYWCDGSDAEYQRLCQQLVDAGT CCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCC FKKLNETKRPNSFLALSDPSDVARVEDRTYICSARKEDAGPTNNWMAPAEMRATLQPLFD HHHHHHCCCCCCEEEECCCCHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH GCMQGRTMYVVPFSMGPLGSPIAHIGVELSDSPYVAVNMKIMTRMGKAVFDVLGVNGDFV HHHCCCEEEEEEECCCCCCCCHHHEEEEECCCCEEEEEHHHHHHHHHHHHHHHCCCCCEE PCVHTVGAPLAAGQKDVTWPCNKTKYIVHYPETREIWSYGSGYGGNALLGKKCFALRIAS HHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHCCCCCCCCCCCCCCHHEEEEEHH NMGRDEGWLAEHMLILGVTNPEGKKYHVAAAFPSACGKTNFSMLVPPAGFDGWKVTTIGD HCCCCCCHHEEEEEEEEEECCCCCEEEEEEECCHHCCCCCCEEEECCCCCCCEEEEEECC DIAWIKPAADGKLYAINPEAGYFGVAPGTNMLTNPNCMRSLDRDTIFTNVGLTDDGDVWW CCEEEEECCCCEEEEECCCCCEEECCCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCHHH EGMEQDAPGKALPAHLIDWQGNDWTPQIAKETGAKAAHPNSRFTVAATNNPALDSAWDDP CCCCCCCCCCCCCCEEEECCCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCC KGVAIDAFIFGGRRSTTVPLVTEARNWVEGVYMAATMGSETTAAATGQAGVVRRDPFAML CCCEEEEEEECCCCCCEEEEHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCEECCCEEEE PFTGYNMSDYFQHWLDMGQKLAGSGAKLPKIYTTNWFRKGADGKFVWPGYGENMRVLKWM CCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEECCCCCCCHHHHHHH IDRIEGSGQGNDHITGVSPSYEDLNWTGLDFSAEQFDSVISMDKAAWLKELELHAELFKQ HHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEHHLPKELDQTMSAIERRLAA HHHHCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA