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The map label for this gene is nahR [H]

Identifier: 91786069

GI number: 91786069

Start: 169670

End: 170698

Strand: Reverse

Name: nahR [H]

Synonym: Bpro_0158

Alternate gene names: 91786069

Gene position: 170698-169670 (Counterclockwise)

Preceding gene: 91786071

Following gene: 91786068

Centisome position: 3.28

GC content: 65.89

Gene sequence:

>1029_bases
ATGTCATTCACAATGGTGATATACAAGTCGATCCAAACCATGCCACCTGGCCCGCTGACGAAGGAGCGCCCCTTGAACCC
AACCAACTTCCGTACCCTCGATCTGAACCTCCTGCGCGTGTTTGACGAGGTCATGGCCGAACGCAGCCTGACACGGGCGG
CGCGCAATCTGTCGCTGACCCAGCCGGCCGTGAGCAATGCGCTACGCCGCCTGCGCGAGACGCTGGGAGACGAGTTGGTG
CAGCGCAGCGGTCAGGGCATGGCGCCCACGCCCCGCGCGCGCGCCATCTGGCCGGCGGTGCGGGAAGCCCTGCAGCGGCT
GCAGGAATCGCTGATCCCCGACGAATTTGTGCCCGGCCAAGCCACCACCACCTTTGTGCTGGCCATGGCCGATGCCACGG
CAGCCGAACTGATACCAGGGCTGATCGAGACGCTGGAGCAGGAGGCGCCGGGGGTGTCGATGCGGGTGATACCGCTGACC
ACGCGCGACCCGCGGCGCCTGTTGGACGAGCAAGCCTGCGATCTGGCCGTCGGCTATTTCCCCTCGGTGCTGGCCGACCT
GACGGCCCACGCCCAGAGCGGCGAGCCCATGCCCTTCCAGCATCGGCGACTGTATGACGGCGAGTATGTCTGCGTGATGC
GCAAGGGGCACCCGCTGGCCAGCGGGCCCCTGACGCTCGACCGCTTCTGCGCCGCGCGGCACATGCTGGTCAGTTTTTCA
GGCCGGCCCTATGGCTTTATTGATGAGTCGCTGGCCTCGCTGGGAAGAGAACGTCAGGTGGTGCTAACCGTCAACCAGTT
CTTCACGGCGGGGCGGGTGGTGGCCAACTCCAACCTCCTGACGGTGTTGCCGCGCCATTTTGTGCGCGTCACCGGTATCG
CTGAGCAGTTGGTGCTGCGTCCCCTGCCCTTTGACGTGTCGGCGGTGCATGTGGATGCGGTGTGGCATCGCCGCTCGCAA
CAACGCGGCGCCCATGTGTGGCTGCGCGAGGCGGTCCTGCGGGCGGCCGACAAGGCCTTTTCGAATTGA

Upstream 100 bases:

>100_bases
GAACTCCTCCGTTGGTTAACTGCCCGACTGGCAAGATTGGCAGCGGGTAGGAGAATATTAGGGTAATTACTAATGTTGTT
CAACTTTATCTTTATGATGA

Downstream 100 bases:

>100_bases
CATCGGGCGCGGGCGCCGGCGTTGATGAACTGGTGCAGAAGGCATGTGCCGCCCCTTCTCGCCACTTCTCGCATCTCTTT
GGGGACAAAACACGGCCACA

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MSFTMVIYKSIQTMPPGPLTKERPLNPTNFRTLDLNLLRVFDEVMAERSLTRAARNLSLTQPAVSNALRRLRETLGDELV
QRSGQGMAPTPRARAIWPAVREALQRLQESLIPDEFVPGQATTTFVLAMADATAAELIPGLIETLEQEAPGVSMRVIPLT
TRDPRRLLDEQACDLAVGYFPSVLADLTAHAQSGEPMPFQHRRLYDGEYVCVMRKGHPLASGPLTLDRFCAARHMLVSFS
GRPYGFIDESLASLGRERQVVLTVNQFFTAGRVVANSNLLTVLPRHFVRVTGIAEQLVLRPLPFDVSAVHVDAVWHRRSQ
QRGAHVWLREAVLRAADKAFSN

Sequences:

>Translated_342_residues
MSFTMVIYKSIQTMPPGPLTKERPLNPTNFRTLDLNLLRVFDEVMAERSLTRAARNLSLTQPAVSNALRRLRETLGDELV
QRSGQGMAPTPRARAIWPAVREALQRLQESLIPDEFVPGQATTTFVLAMADATAAELIPGLIETLEQEAPGVSMRVIPLT
TRDPRRLLDEQACDLAVGYFPSVLADLTAHAQSGEPMPFQHRRLYDGEYVCVMRKGHPLASGPLTLDRFCAARHMLVSFS
GRPYGFIDESLASLGRERQVVLTVNQFFTAGRVVANSNLLTVLPRHFVRVTGIAEQLVLRPLPFDVSAVHVDAVWHRRSQ
QRGAHVWLREAVLRAADKAFSN
>Mature_341_residues
SFTMVIYKSIQTMPPGPLTKERPLNPTNFRTLDLNLLRVFDEVMAERSLTRAARNLSLTQPAVSNALRRLRETLGDELVQ
RSGQGMAPTPRARAIWPAVREALQRLQESLIPDEFVPGQATTTFVLAMADATAAELIPGLIETLEQEAPGVSMRVIPLTT
RDPRRLLDEQACDLAVGYFPSVLADLTAHAQSGEPMPFQHRRLYDGEYVCVMRKGHPLASGPLTLDRFCAARHMLVSFSG
RPYGFIDESLASLGRERQVVLTVNQFFTAGRVVANSNLLTVLPRHFVRVTGIAEQLVLRPLPFDVSAVHVDAVWHRRSQQ
RGAHVWLREAVLRAADKAFSN

Specific function: Regulates the expression of the naphthalene (nahA-F) and salicylate (nahG-M) metabolism genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081684, Length=317, Percent_Identity=29.6529968454259, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI87081766, Length=276, Percent_Identity=24.6376811594203, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1790147, Length=305, Percent_Identity=26.2295081967213, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787601, Length=252, Percent_Identity=21.8253968253968, Blast_Score=61, Evalue=8e-11,

Paralogues:

None

Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 38095; Mature: 37964

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFTMVIYKSIQTMPPGPLTKERPLNPTNFRTLDLNLLRVFDEVMAERSLTRAARNLSLT
CCEEEEEHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCC
QPAVSNALRRLRETLGDELVQRSGQGMAPTPRARAIWPAVREALQRLQESLIPDEFVPGQ
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
ATTTFVLAMADATAAELIPGLIETLEQEAPGVSMRVIPLTTRDPRRLLDEQACDLAVGYF
CHHEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHH
PSVLADLTAHAQSGEPMPFQHRRLYDGEYVCVMRKGHPLASGPLTLDRFCAARHMLVSFS
HHHHHHHHHHCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHEEC
GRPYGFIDESLASLGRERQVVLTVNQFFTAGRVVANSNLLTVLPRHFVRVTGIAEQLVLR
CCCCCHHHHHHHHCCCCCEEEEEHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHC
PLPFDVSAVHVDAVWHRRSQQRGAHVWLREAVLRAADKAFSN
CCCCCCHHEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SFTMVIYKSIQTMPPGPLTKERPLNPTNFRTLDLNLLRVFDEVMAERSLTRAARNLSLT
CEEEEEHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCC
QPAVSNALRRLRETLGDELVQRSGQGMAPTPRARAIWPAVREALQRLQESLIPDEFVPGQ
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
ATTTFVLAMADATAAELIPGLIETLEQEAPGVSMRVIPLTTRDPRRLLDEQACDLAVGYF
CHHEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHH
PSVLADLTAHAQSGEPMPFQHRRLYDGEYVCVMRKGHPLASGPLTLDRFCAARHMLVSFS
HHHHHHHHHHCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHEEC
GRPYGFIDESLASLGRERQVVLTVNQFFTAGRVVANSNLLTVLPRHFVRVTGIAEQLVLR
CCCCCHHHHHHHHCCCCCEEEEEHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHC
PLPFDVSAVHVDAVWHRRSQQRGAHVWLREAVLRAADKAFSN
CCCCCCHHEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2703465; 2848005 [H]