| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is ybaY [H]
Identifier: 91786032
GI number: 91786032
Start: 124003
End: 124452
Strand: Direct
Name: ybaY [H]
Synonym: Bpro_0121
Alternate gene names: 91786032
Gene position: 124003-124452 (Clockwise)
Preceding gene: 91786031
Following gene: 91786034
Centisome position: 2.38
GC content: 66.0
Gene sequence:
>450_bases ATGAATCGACGAATGATGGGGGCGGCCGCCCTCGCTGTCCTTGGCCTGCTCACTGCATGCGCGACCGGACCCGCCTCCGC TCCCCCGGCCGACGTGCCAGCAGCATCTGCCACCTCCGGGCTGCGTGTGACCGGCACCGTGTCCTACCTGCAGCGCGTGG CCTTGCCGCCCGACAGCGACGTCATTGTCCAGCTGCGTGACATCTCGCGACTCGACTCGCCATCGGGCGTGTTGGCCGAG CAGCGTTTCACGCCCCGCAGCCAGGTGCCCTTGCCGTTCGAACTCAGCGTGGATCCGGGCCGGATAGACCCGCGCATGCG CTACGCCGTGGCAGCGCGCATTCAGCGCAACGGCAAATTGCTGTTCATCAACGACAAGCTGCACCTGGTGCTCACGCAAG GCCATGGCAACCGTGTCGACATGGTGCTGCACATGGTGTCCAAACCCTGA
Upstream 100 bases:
>100_bases AACCGATCGAGAAGGTGGTGAACCGGGACGCGATGGCCAACCCGGATTGCCTCGCATGGTATGTTCAGTTCTCGCAAAAC TACCTTGCCGAAAGGGGCGC
Downstream 100 bases:
>100_bases AACCCTGAAACGCTCAGGCCGCCGCCGGCTGACGATTCACCAGCACGACACCGACGGCCACCAGCGCCAGCGCCGCCAGC AGGCCGGGCGTCACACTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MNRRMMGAAALAVLGLLTACATGPASAPPADVPAASATSGLRVTGTVSYLQRVALPPDSDVIVQLRDISRLDSPSGVLAE QRFTPRSQVPLPFELSVDPGRIDPRMRYAVAARIQRNGKLLFINDKLHLVLTQGHGNRVDMVLHMVSKP
Sequences:
>Translated_149_residues MNRRMMGAAALAVLGLLTACATGPASAPPADVPAASATSGLRVTGTVSYLQRVALPPDSDVIVQLRDISRLDSPSGVLAE QRFTPRSQVPLPFELSVDPGRIDPRMRYAVAARIQRNGKLLFINDKLHLVLTQGHGNRVDMVLHMVSKP >Mature_149_residues MNRRMMGAAALAVLGLLTACATGPASAPPADVPAASATSGLRVTGTVSYLQRVALPPDSDVIVQLRDISRLDSPSGVLAE QRFTPRSQVPLPFELSVDPGRIDPRMRYAVAARIQRNGKLLFINDKLHLVLTQGHGNRVDMVLHMVSKP
Specific function: Unknown
COG id: COG3126
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786658, Length=103, Percent_Identity=42.7184466019417, Blast_Score=77, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15975; Mature: 15975
Theoretical pI: Translated: 10.99; Mature: 10.99
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRRMMGAAALAVLGLLTACATGPASAPPADVPAASATSGLRVTGTVSYLQRVALPPDSD CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCC VIVQLRDISRLDSPSGVLAEQRFTPRSQVPLPFELSVDPGRIDPRMRYAVAARIQRNGKL EEEEEECHHCCCCCCCCEECCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCE LFINDKLHLVLTQGHGNRVDMVLHMVSKP EEECCCEEEEEECCCCCCHHHEEEECCCC >Mature Secondary Structure MNRRMMGAAALAVLGLLTACATGPASAPPADVPAASATSGLRVTGTVSYLQRVALPPDSD CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCC VIVQLRDISRLDSPSGVLAEQRFTPRSQVPLPFELSVDPGRIDPRMRYAVAARIQRNGKL EEEEEECHHCCCCCCCCEECCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCE LFINDKLHLVLTQGHGNRVDMVLHMVSKP EEECCCEEEEEECCCCCCHHHEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]