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The map label for this gene is ygbK [C]

Identifier: 91786007

GI number: 91786007

Start: 98341

End: 99714

Strand: Direct

Name: ygbK [C]

Synonym: Bpro_0094

Alternate gene names: 91786007

Gene position: 98341-99714 (Clockwise)

Preceding gene: 91786006

Following gene: 91786008

Centisome position: 1.89

GC content: 72.05

Gene sequence:

>1374_bases
GTGGCCGACAACCGCTGGCCGGACGGCCTGCTGCTCGCCTACTACGGCGACGACTTCACCGGCTCCACCGACGTGATGGA
GGCCTTCAGCGCGGCTGGCGTGCCGACCGTGCTGTTCCTGCGCCCGCCCACGGCAGACTGGCTGAAGCGGTTTCCCGAGG
TGCGCTGCGTCGGCCTGGCCGGCCAGTCGCGCGGCCGCAGCCCGGACTGGATGGACCGCGAGTTGCCGCAGGCCTTCGCC
AGCCTGGCCAAACTCGGCGCGCCGATTCTGCAATACAAGGTCTGCTCGACCTTCGACTCCTCGCCCGCGGTGGGTTCGAT
CGGCCGCGCCATCGATATCGGCGTGCCGCTGATGCCGGGCAACTGGTCGCCCATGGTGGTCGGCGCGCCGCGCCTGAAGC
GCTACCAGGCCTTTGGCAACCTGTTCGCGGCGGTCGACGGCGTGGGCTACCGCCTGGACCGGCACCCGACCATGTCGCGC
CACCCGGTCACGCCCATGGCCGAGGCTGACCTGCGCCTGCATCTGGCGGCGCAGACACCGCGCCGCAGCGAGCTGATCGA
CATGGTGCAGCTGCGTACCGGCGACGCGGCCGCCCGCGTGCAGGCGCTCGCCGGTGCCGACGTGCCGGTGGTGCTGCTTG
ACGTGCTTGACGAAGAAACACTGGCTGCGGCCGGCCGCCTGGTCTGGACGCAGCGCGGCCGTGGCCTGTTCACGGCCTCG
TCATCCGGCCTGCAGTACGCGCTGGCCGCGCACTGGCGCAGCCAGGGCCTGTTGCCGGAGCAGCCTTCGCTGCCGGTGGC
GGCACCCGTGCCGGTGATTGCCGTGGTCAGCGGCAGTTGCTCGCCGGTGACGGCGGCGCAGATCGCCTGGGCGCAAGGGC
AGGGCTTTCAGGCCGAGCGCCTGAATCTGCCGCGCCTGCTCGACGCACGCGAGAGCGAGGTCGAGATAGAGCGCGTGGTG
GCCGCCGCCGTGGGGGCCATAGCGCTGGGCGTCAGCCCGCTCGTGTATTCAGCCGCCGGGCCCGACGACGCAGCGGTGCG
CCAGTTCGATGCGACGGCCACGCAAGCCGGCCTGGCCCGCGGCGAGGCGGCGCAGCGCGTCGGTGAGGGTCTTGCCGAAG
TGATGCGGCGGCTGCTCGAGCGTGCGCCCTTGCAGCGCATTGTGGTGGCTGGTGGCGACAGTTCGGGCGAGGTGGCGAGC
GCGCTCGACATCACCGCGCTCAGCGTGGTGGCCGGGCTCGCGCCGGGCGCACCGCTGTGCAAGGCCTGGTCCGAGCGCCG
CGAACGCGACGGCCTGGAGATTGTGCTGAAGGGCGGCCAGATGGGCACGGCCTCGTTTTTCGGCGCCGTGCGTGCCGGCC
GTTTGCTCGACTAA

Upstream 100 bases:

>100_bases
TCCGCCAGGCCTGGGAGGCGGCGATGGCTGGCACGCCGCTGCACGAGCATGCCAAAACGCATGCCGAGCTGCGCAGCGCG
CTTGAGTTCTGGTGAGCGCC

Downstream 100 bases:

>100_bases
GTGATAATTAAAAGCTCACCCCGCCCGAAGTTTTTCCGTTTCCACTCCTATCCGCCACCATGACCACCGAACAGATCCAG
CGCCGCAAGCTGTACCAGGA

Product: Hrp-dependent type III effector protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MADNRWPDGLLLAYYGDDFTGSTDVMEAFSAAGVPTVLFLRPPTADWLKRFPEVRCVGLAGQSRGRSPDWMDRELPQAFA
SLAKLGAPILQYKVCSTFDSSPAVGSIGRAIDIGVPLMPGNWSPMVVGAPRLKRYQAFGNLFAAVDGVGYRLDRHPTMSR
HPVTPMAEADLRLHLAAQTPRRSELIDMVQLRTGDAAARVQALAGADVPVVLLDVLDEETLAAAGRLVWTQRGRGLFTAS
SSGLQYALAAHWRSQGLLPEQPSLPVAAPVPVIAVVSGSCSPVTAAQIAWAQGQGFQAERLNLPRLLDARESEVEIERVV
AAAVGAIALGVSPLVYSAAGPDDAAVRQFDATATQAGLARGEAAQRVGEGLAEVMRRLLERAPLQRIVVAGGDSSGEVAS
ALDITALSVVAGLAPGAPLCKAWSERRERDGLEIVLKGGQMGTASFFGAVRAGRLLD

Sequences:

>Translated_457_residues
MADNRWPDGLLLAYYGDDFTGSTDVMEAFSAAGVPTVLFLRPPTADWLKRFPEVRCVGLAGQSRGRSPDWMDRELPQAFA
SLAKLGAPILQYKVCSTFDSSPAVGSIGRAIDIGVPLMPGNWSPMVVGAPRLKRYQAFGNLFAAVDGVGYRLDRHPTMSR
HPVTPMAEADLRLHLAAQTPRRSELIDMVQLRTGDAAARVQALAGADVPVVLLDVLDEETLAAAGRLVWTQRGRGLFTAS
SSGLQYALAAHWRSQGLLPEQPSLPVAAPVPVIAVVSGSCSPVTAAQIAWAQGQGFQAERLNLPRLLDARESEVEIERVV
AAAVGAIALGVSPLVYSAAGPDDAAVRQFDATATQAGLARGEAAQRVGEGLAEVMRRLLERAPLQRIVVAGGDSSGEVAS
ALDITALSVVAGLAPGAPLCKAWSERRERDGLEIVLKGGQMGTASFFGAVRAGRLLD
>Mature_456_residues
ADNRWPDGLLLAYYGDDFTGSTDVMEAFSAAGVPTVLFLRPPTADWLKRFPEVRCVGLAGQSRGRSPDWMDRELPQAFAS
LAKLGAPILQYKVCSTFDSSPAVGSIGRAIDIGVPLMPGNWSPMVVGAPRLKRYQAFGNLFAAVDGVGYRLDRHPTMSRH
PVTPMAEADLRLHLAAQTPRRSELIDMVQLRTGDAAARVQALAGADVPVVLLDVLDEETLAAAGRLVWTQRGRGLFTASS
SGLQYALAAHWRSQGLLPEQPSLPVAAPVPVIAVVSGSCSPVTAAQIAWAQGQGFQAERLNLPRLLDARESEVEIERVVA
AAVGAIALGVSPLVYSAAGPDDAAVRQFDATATQAGLARGEAAQRVGEGLAEVMRRLLERAPLQRIVVAGGDSSGEVASA
LDITALSVVAGLAPGAPLCKAWSERRERDGLEIVLKGGQMGTASFFGAVRAGRLLD

Specific function: Unknown

COG id: COG3395

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygbK [H]

Homologues:

Organism=Escherichia coli, GI1789093, Length=408, Percent_Identity=27.9411764705882, Blast_Score=83, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010737 [H]

Pfam domain/function: PF07005 DUF1537 [H]

EC number: NA

Molecular weight: Translated: 48271; Mature: 48140

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADNRWPDGLLLAYYGDDFTGSTDVMEAFSAAGVPTVLFLRPPTADWLKRFPEVRCVGLA
CCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCEEEEEEC
GQSRGRSPDWMDRELPQAFASLAKLGAPILQYKVCSTFDSSPAVGSIGRAIDIGVPLMPG
CCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCC
NWSPMVVGAPRLKRYQAFGNLFAAVDGVGYRLDRHPTMSRHPVTPMAEADLRLHLAAQTP
CCCCEEECCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEECCC
RRSELIDMVQLRTGDAAARVQALAGADVPVVLLDVLDEETLAAAGRLVWTQRGRGLFTAS
CHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHCHHHHHHHCCEEEEECCCEEEEEC
SSGLQYALAAHWRSQGLLPEQPSLPVAAPVPVIAVVSGSCSPVTAAQIAWAQGQGFQAER
CCCCEEHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHEEECCCCCCCHHH
LNLPRLLDARESEVEIERVVAAAVGAIALGVSPLVYSAAGPDDAAVRQFDATATQAGLAR
CCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCHHHHHHHHHHHHHHHHHH
GEAAQRVGEGLAEVMRRLLERAPLQRIVVAGGDSSGEVASALDITALSVVAGLAPGAPLC
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHH
KAWSERRERDGLEIVLKGGQMGTASFFGAVRAGRLLD
HHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ADNRWPDGLLLAYYGDDFTGSTDVMEAFSAAGVPTVLFLRPPTADWLKRFPEVRCVGLA
CCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCEEEEEEC
GQSRGRSPDWMDRELPQAFASLAKLGAPILQYKVCSTFDSSPAVGSIGRAIDIGVPLMPG
CCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCC
NWSPMVVGAPRLKRYQAFGNLFAAVDGVGYRLDRHPTMSRHPVTPMAEADLRLHLAAQTP
CCCCEEECCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEECCC
RRSELIDMVQLRTGDAAARVQALAGADVPVVLLDVLDEETLAAAGRLVWTQRGRGLFTAS
CHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHCHHHHHHHCCEEEEECCCEEEEEC
SSGLQYALAAHWRSQGLLPEQPSLPVAAPVPVIAVVSGSCSPVTAAQIAWAQGQGFQAER
CCCCEEHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHEEECCCCCCCHHH
LNLPRLLDARESEVEIERVVAAAVGAIALGVSPLVYSAAGPDDAAVRQFDATATQAGLAR
CCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCHHHHHHHHHHHHHHHHHH
GEAAQRVGEGLAEVMRRLLERAPLQRIVVAGGDSSGEVASALDITALSVVAGLAPGAPLC
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHH
KAWSERRERDGLEIVLKGGQMGTASFFGAVRAGRLLD
HHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]