Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is phnA [H]

Identifier: 91785998

GI number: 91785998

Start: 88293

End: 88634

Strand: Direct

Name: phnA [H]

Synonym: Bpro_0085

Alternate gene names: 91785998

Gene position: 88293-88634 (Clockwise)

Preceding gene: 91785997

Following gene: 91785999

Centisome position: 1.7

GC content: 60.82

Gene sequence:

>342_bases
ATGCCCACTATCCCAGCCTGCCCCCAGTGCGCCCTGGAGAACACCTACCCGGACGGCGACAACTATGTTTGTGCCGACTG
CGGCCATGAATGGCCCATGCTGGAGACCGCAGACGCTGATGACAGCGCCGACGCCGTGGTCAAGGACGCCAATGGCAACG
TGCTGGCCGACGGCGACGCCGTGGTGCTCATCAAGGACCTGAAAGTCAAGGGTTCGTCCATCACCCTCAAAATGGGGACC
AAGGTCAAAAGCATTCGCCTGGTCGGCGGCGACCATGAGGTGGACTGCAAAATGGACGCCGGCAGTTTCATGCTGAAAGC
CTGCTACCTGAGGAAGGCCTGA

Upstream 100 bases:

>100_bases
TCCATCAGGCCAGGCAGGCCATCCTGTCGGGCCGGGTTGCAGCCCCGGCCCATGAGGGATACTCCAGCTTGCCTCAACTA
CCTGCGATTTGAACGGAATC

Downstream 100 bases:

>100_bases
CCGGGACCCGCCGGGCCAGGCGCTTTCCCACCGGCTCTCCCAGATACAGGACAGACAAGACAGGGCCGGAACACACGGCG
CTGATCAAATCAGTCGACGC

Product: alkylphosphonate utilization operon protein PhnA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MPTIPACPQCALENTYPDGDNYVCADCGHEWPMLETADADDSADAVVKDANGNVLADGDAVVLIKDLKVKGSSITLKMGT
KVKSIRLVGGDHEVDCKMDAGSFMLKACYLRKA

Sequences:

>Translated_113_residues
MPTIPACPQCALENTYPDGDNYVCADCGHEWPMLETADADDSADAVVKDANGNVLADGDAVVLIKDLKVKGSSITLKMGT
KVKSIRLVGGDHEVDCKMDAGSFMLKACYLRKA
>Mature_112_residues
PTIPACPQCALENTYPDGDNYVCADCGHEWPMLETADADDSADAVVKDANGNVLADGDAVVLIKDLKVKGSSITLKMGTK
VKSIRLVGGDHEVDCKMDAGSFMLKACYLRKA

Specific function: Unknown

COG id: COG2824

COG function: function code P; Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790547, Length=111, Percent_Identity=54.954954954955, Blast_Score=122, Evalue=8e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004624
- InterPro:   IPR013988
- InterPro:   IPR013987 [H]

Pfam domain/function: PF03831 PhnA; PF08274 PhnA_Zn_Ribbon [H]

EC number: NA

Molecular weight: Translated: 12023; Mature: 11892

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
9.7 %Cys+Met (Translated Protein)
5.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
8.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTIPACPQCALENTYPDGDNYVCADCGHEWPMLETADADDSADAVVKDANGNVLADGDA
CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCCCCEEEECCCCCEEECCCE
VVLIKDLKVKGSSITLKMGTKVKSIRLVGGDHEVDCKMDAGSFMLKACYLRKA
EEEEEECEECCCEEEEEECCCEEEEEEECCCCEEEEEECCCHHEEEEEEECCC
>Mature Secondary Structure 
PTIPACPQCALENTYPDGDNYVCADCGHEWPMLETADADDSADAVVKDANGNVLADGDA
CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCCCCEEEECCCCCEEECCCE
VVLIKDLKVKGSSITLKMGTKVKSIRLVGGDHEVDCKMDAGSFMLKACYLRKA
EEEEEECEECCCEEEEEECCCEEEEEEECCCCEEEEEECCCHHEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]