| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is thiG [H]
Identifier: 91785953
GI number: 91785953
Start: 43149
End: 43964
Strand: Direct
Name: thiG [H]
Synonym: Bpro_0040
Alternate gene names: 91785953
Gene position: 43149-43964 (Clockwise)
Preceding gene: 91785951
Following gene: 91785954
Centisome position: 0.83
GC content: 69.49
Gene sequence:
>816_bases ATGACGACAACCCCATCCGCTATCGCGCATGGCCAGCCTTGGACGGTCGCCGGCATCACGCTGCAAAGCCGGTTTTTTCT CGGCACTTCGCATTACCCGTCGCCGCAGGTCCTGAGCGAGGCTGTGGCGGCCTCCGGCACCGAGGTGCTGACGGTCGGGT TGCGCCGGCTGCAGCCCGAAAGCGGCGGCGGCAACAGCTTCTGGCAGCGCATCCAGGCGCTGGGCTGCCACATGCTGCCC AACACGGCGGGCTGCCACAGCGCCGAAGAAGCCATCACGCTGGCGCAGATGGCGCGCGAGATTTTCGGCACCCCCTGGAT CAAGCTGGAAGTCATCGGCGACGACTACACGCTGCAGCCCGACACGCAGGCCACCCTGCATGCGGCCAGCGTGCTGGCGC GCGAAGGCTTTGCGGTGTTTGCCTACACTACCGATGACCTGGTGATCGCCCAGCGCCTGCGCGACGCCGGCTGCGCGGCG GTGATGCCCTGGGCCGCACCGATTGGCACCGGCCGCGGGCCGCTGAACCCGTATGCGCTGGAAATGATGCGCCGCCGCCT GCCCGATGCGGTGCTGGTGGTGGACGCCGGGCTGGGCCGGCCTTCGCATGCGGCGCAGGTGATGGAGCTGGGCTTTGACG CCGTGCTGCTGAACACCGCCGTGGCGCAGGCGGGTGACCCGGTGCGCATGGCCCGCGCATTTGCCGATGGTGTGGCCGCC GGCCGCGCCGCATATGAGTCGACGCCCATGCCCGAGCGCGCTGCGGCGCAAGCTTCCACTTCGACCGTGGGCGTGCCGTT TTGGCATGCGCCCTAG
Upstream 100 bases:
>100_bases TGTAGCACCTTCCCCCCTTGCAGGGGGCGATGCCTGCGGACTGGCGGAGCCAGTTCCGCGGTGTCTGCTGGTATGGAACC GAATCGATGGAGCAACTGAC
Downstream 100 bases:
>100_bases GGGCAGCCATAAATCCGAATCTCGGGCGCATGGCGGCGTTGCGCGGTGCCCGGAATCCTCATGCACGCAAGTGCATTCCG GTGTCCTGCGCTCCGTGCGC
Product: thiazole synthase
Products: 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate; 4-hydroxy-benzyl-alcohol; C1 of tyrosine; ThiS protein [C]
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MTTTPSAIAHGQPWTVAGITLQSRFFLGTSHYPSPQVLSEAVAASGTEVLTVGLRRLQPESGGGNSFWQRIQALGCHMLP NTAGCHSAEEAITLAQMAREIFGTPWIKLEVIGDDYTLQPDTQATLHAASVLAREGFAVFAYTTDDLVIAQRLRDAGCAA VMPWAAPIGTGRGPLNPYALEMMRRRLPDAVLVVDAGLGRPSHAAQVMELGFDAVLLNTAVAQAGDPVRMARAFADGVAA GRAAYESTPMPERAAAQASTSTVGVPFWHAP
Sequences:
>Translated_271_residues MTTTPSAIAHGQPWTVAGITLQSRFFLGTSHYPSPQVLSEAVAASGTEVLTVGLRRLQPESGGGNSFWQRIQALGCHMLP NTAGCHSAEEAITLAQMAREIFGTPWIKLEVIGDDYTLQPDTQATLHAASVLAREGFAVFAYTTDDLVIAQRLRDAGCAA VMPWAAPIGTGRGPLNPYALEMMRRRLPDAVLVVDAGLGRPSHAAQVMELGFDAVLLNTAVAQAGDPVRMARAFADGVAA GRAAYESTPMPERAAAQASTSTVGVPFWHAP >Mature_270_residues TTTPSAIAHGQPWTVAGITLQSRFFLGTSHYPSPQVLSEAVAASGTEVLTVGLRRLQPESGGGNSFWQRIQALGCHMLPN TAGCHSAEEAITLAQMAREIFGTPWIKLEVIGDDYTLQPDTQATLHAASVLAREGFAVFAYTTDDLVIAQRLRDAGCAAV MPWAAPIGTGRGPLNPYALEMMRRRLPDAVLVVDAGLGRPSHAAQVMELGFDAVLLNTAVAQAGDPVRMARAFADGVAAG RAAYESTPMPERAAAQASTSTVGVPFWHAP
Specific function: Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S [H]
COG id: COG2022
COG function: function code H; Uncharacterized enzyme of thiazole biosynthesis
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiG family [H]
Homologues:
Organism=Escherichia coli, GI48994993, Length=249, Percent_Identity=43.3734939759036, Blast_Score=186, Evalue=1e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR008867 [H]
Pfam domain/function: PF05690 ThiG [H]
EC number: NA
Molecular weight: Translated: 28620; Mature: 28489
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTPSAIAHGQPWTVAGITLQSRFFLGTSHYPSPQVLSEAVAASGTEVLTVGLRRLQPE CCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCC SGGGNSFWQRIQALGCHMLPNTAGCHSAEEAITLAQMAREIFGTPWIKLEVIGDDYTLQP CCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCEEECC DTQATLHAASVLAREGFAVFAYTTDDLVIAQRLRDAGCAAVMPWAAPIGTGRGPLNPYAL CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHH EMMRRRLPDAVLVVDAGLGRPSHAAQVMELGFDAVLLNTAVAQAGDPVRMARAFADGVAA HHHHHHCCCEEEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH GRAAYESTPMPERAAAQASTSTVGVPFWHAP HHHHHCCCCCCHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TTTPSAIAHGQPWTVAGITLQSRFFLGTSHYPSPQVLSEAVAASGTEVLTVGLRRLQPE CCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCC SGGGNSFWQRIQALGCHMLPNTAGCHSAEEAITLAQMAREIFGTPWIKLEVIGDDYTLQP CCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCEEECC DTQATLHAASVLAREGFAVFAYTTDDLVIAQRLRDAGCAAVMPWAAPIGTGRGPLNPYAL CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHH EMMRRRLPDAVLVVDAGLGRPSHAAQVMELGFDAVLLNTAVAQAGDPVRMARAFADGVAA HHHHHHCCCEEEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH GRAAYESTPMPERAAAQASTSTVGVPFWHAP HHHHHCCCCCCHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: deoxyxylulose-5-phosphate; ThiS-COSH; L-tyrosine [C]
Specific reaction: deoxyxylulose-5-phosphate + ThiS-COSH + L-tyrosine = 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate + 4-hydroxy-benzyl-alcohol + C1 of tyrosine + ThiS protein [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA