| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91785927
Identifier: 91785927
GI number: 91785927
Start: 13100
End: 14320
Strand: Direct
Name: 91785927
Synonym: Bpro_0014
Alternate gene names: NA
Gene position: 13100-14320 (Clockwise)
Preceding gene: 91785926
Following gene: 91785929
Centisome position: 0.25
GC content: 66.5
Gene sequence:
>1221_bases ATGCCTGCAAAGTCGCAAAAATTCGCTCTTTATGATCACCCCGCGCAGATGGAGCCCTTGCTGCCGGGTGAGCACCTTCT GGAGCCGCTGCTGGAGCAGGCCCATGATCTGCAGCGCGAGGCGCGCAGTCTGGCGGGGGCAGGCGCACCGGCCGATCTCC GCCAGCTGCTGCGGGCGATGAACTCCTATTACAGCAACAAAATCGAGGGGCAACACACGCTGCCTTTTGAGATTGAGCGC GCGTTGCGCAATGACTATTCGCAGGACGGGGACAAGGCGCGGCGCCAGCGGCTGGCGCTGGCCCACATGGAAACCGAGCG TGCCATTGAAACCGGCTGGAAGGGCTGGTCCAGCCAGCAGGTATGGTCTGCGCAAATGGTGCGCGACATTCACCAAGACC TGTTTGCCCGTCTGCCGGATGCCGACCGTGTGCTGCCCGAGGGCGATGTGCTGGTGCCTGGCGCTTTGCGCGACCGCGAG GTCAGCGTGGGCGTGCATGCGGCGCCGGCCCACGCGGCCATCAGCGCCATGCTGGAGCGCTGGGGCGGTTTTTACGGCGG TGTGCGGCGGGGTGAGCTGCAGGTTCTGGCCGTTGCCGCCTCGCACCACCGGCTGGCGTGGATCCACCCGTTCCGCGACG GCAATGGCCGCGTGGCGCGGCTGCACACGCACCTTGCGCTGGGCGCGCTGGGCCTGACCAATGGCTTGTGGTCGCCGCTG CGCGGCTTTGCCCGCAGCCACGAGGCTTACTACCTGCATCTGGCCGCCGCCGATGAGCCGCGGGCCGGTGACCTGGATGG GCGTGGCAACCTGTCGGAGCGCGCGCTGATGGCCTGGATGCGCTATGTGCTGGGCCTATGTATTGACCAGGTGCGCTTCA TGGCCGGCTTGCTCGACATGGCCGGCATGAAGGACCGCATTGCCGCCTGCCTGGCCTTCGAGGAAAACGTGGTGAAGCGC GGTGTGCGCAGCGAGTCGCTGCGGGCATTGCACTACCTGTTACTGACGCAGGCCGAACTGGAGCGCAGCGAGTTCAAGGC TTTGCTGGGGCTGGGGGAGCGCCTTGCTACGGCGCAGGTGACGGCACTGCTCAAGCGTGGCCTGCTCGTCACGGACTCGC CCCACGGCAAGTTGCGCTTTGGTGTGCCGCAGCATGCACTGCGCTTTTACTTTCCCAGCCTGTGGCCCGAGGCCGAGGCG GGCGGCGATGCAGGGCAGTAA
Upstream 100 bases:
>100_bases GGTGGTGAGGCCATGGGGCGCAAGGAACTGGTGGCGCAAGAAAAGTCGCAAAAACATATGCAGAAATTGTAAAAAGTCTA TATAAAGCATAGACTTGCGA
Downstream 100 bases:
>100_bases TTCCATTTCTACTTCAAAGCGATAGGTCGTTGCCCCGCCTTGGCCGTTACAGCACTGTCTGCGGCGGTGCGCCTACTCTC GCATTGAATTAGAAATGGAA
Product: filamentation induced by cAMP protein Fic
Products: NA
Alternate protein names: Fic Family Protein; CAMP-Induced Filamentation Protein; Fic Protein Family; Fic Protein; Fic Family
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MPAKSQKFALYDHPAQMEPLLPGEHLLEPLLEQAHDLQREARSLAGAGAPADLRQLLRAMNSYYSNKIEGQHTLPFEIER ALRNDYSQDGDKARRQRLALAHMETERAIETGWKGWSSQQVWSAQMVRDIHQDLFARLPDADRVLPEGDVLVPGALRDRE VSVGVHAAPAHAAISAMLERWGGFYGGVRRGELQVLAVAASHHRLAWIHPFRDGNGRVARLHTHLALGALGLTNGLWSPL RGFARSHEAYYLHLAAADEPRAGDLDGRGNLSERALMAWMRYVLGLCIDQVRFMAGLLDMAGMKDRIAACLAFEENVVKR GVRSESLRALHYLLLTQAELERSEFKALLGLGERLATAQVTALLKRGLLVTDSPHGKLRFGVPQHALRFYFPSLWPEAEA GGDAGQ
Sequences:
>Translated_406_residues MPAKSQKFALYDHPAQMEPLLPGEHLLEPLLEQAHDLQREARSLAGAGAPADLRQLLRAMNSYYSNKIEGQHTLPFEIER ALRNDYSQDGDKARRQRLALAHMETERAIETGWKGWSSQQVWSAQMVRDIHQDLFARLPDADRVLPEGDVLVPGALRDRE VSVGVHAAPAHAAISAMLERWGGFYGGVRRGELQVLAVAASHHRLAWIHPFRDGNGRVARLHTHLALGALGLTNGLWSPL RGFARSHEAYYLHLAAADEPRAGDLDGRGNLSERALMAWMRYVLGLCIDQVRFMAGLLDMAGMKDRIAACLAFEENVVKR GVRSESLRALHYLLLTQAELERSEFKALLGLGERLATAQVTALLKRGLLVTDSPHGKLRFGVPQHALRFYFPSLWPEAEA GGDAGQ >Mature_405_residues PAKSQKFALYDHPAQMEPLLPGEHLLEPLLEQAHDLQREARSLAGAGAPADLRQLLRAMNSYYSNKIEGQHTLPFEIERA LRNDYSQDGDKARRQRLALAHMETERAIETGWKGWSSQQVWSAQMVRDIHQDLFARLPDADRVLPEGDVLVPGALRDREV SVGVHAAPAHAAISAMLERWGGFYGGVRRGELQVLAVAASHHRLAWIHPFRDGNGRVARLHTHLALGALGLTNGLWSPLR GFARSHEAYYLHLAAADEPRAGDLDGRGNLSERALMAWMRYVLGLCIDQVRFMAGLLDMAGMKDRIAACLAFEENVVKRG VRSESLRALHYLLLTQAELERSEFKALLGLGERLATAQVTALLKRGLLVTDSPHGKLRFGVPQHALRFYFPSLWPEAEAG GDAGQ
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45089; Mature: 44958
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAKSQKFALYDHPAQMEPLLPGEHLLEPLLEQAHDLQREARSLAGAGAPADLRQLLRAM CCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH NSYYSNKIEGQHTLPFEIERALRNDYSQDGDKARRQRLALAHMETERAIETGWKGWSSQQ HHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH VWSAQMVRDIHQDLFARLPDADRVLPEGDVLVPGALRDREVSVGVHAAPAHAAISAMLER HHHHHHHHHHHHHHHHHCCCHHCCCCCCCEECCCCCCCCEEECCCCCCHHHHHHHHHHHH WGGFYGGVRRGELQVLAVAASHHRLAWIHPFRDGNGRVARLHTHLALGALGLTNGLWSPL HCCHHCCCCCCCEEEEEEECCCCEEEEEECEECCCCCEEEEHHHHHHHHHHHHHHHHHHH RGFARSHEAYYLHLAAADEPRAGDLDGRGNLSERALMAWMRYVLGLCIDQVRFMAGLLDM HHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGMKDRIAACLAFEENVVKRGVRSESLRALHYLLLTQAELERSEFKALLGLGERLATAQV CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TALLKRGLLVTDSPHGKLRFGVPQHALRFYFPSLWPEAEAGGDAGQ HHHHHCCCEEECCCCCCEEECCHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure PAKSQKFALYDHPAQMEPLLPGEHLLEPLLEQAHDLQREARSLAGAGAPADLRQLLRAM CCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH NSYYSNKIEGQHTLPFEIERALRNDYSQDGDKARRQRLALAHMETERAIETGWKGWSSQQ HHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH VWSAQMVRDIHQDLFARLPDADRVLPEGDVLVPGALRDREVSVGVHAAPAHAAISAMLER HHHHHHHHHHHHHHHHHCCCHHCCCCCCCEECCCCCCCCEEECCCCCCHHHHHHHHHHHH WGGFYGGVRRGELQVLAVAASHHRLAWIHPFRDGNGRVARLHTHLALGALGLTNGLWSPL HCCHHCCCCCCCEEEEEEECCCCEEEEEECEECCCCCEEEEHHHHHHHHHHHHHHHHHHH RGFARSHEAYYLHLAAADEPRAGDLDGRGNLSERALMAWMRYVLGLCIDQVRFMAGLLDM HHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGMKDRIAACLAFEENVVKRGVRSESLRALHYLLLTQAELERSEFKALLGLGERLATAQV CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TALLKRGLLVTDSPHGKLRFGVPQHALRFYFPSLWPEAEAGGDAGQ HHHHHCCCEEECCCCCCEEECCHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA