Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91785926

Identifier: 91785926

GI number: 91785926

Start: 12504

End: 12926

Strand: Direct

Name: 91785926

Synonym: Bpro_0013

Alternate gene names: NA

Gene position: 12504-12926 (Clockwise)

Preceding gene: 91785925

Following gene: 91785927

Centisome position: 0.24

GC content: 64.07

Gene sequence:

>423_bases
GTGAGCTACCTGATTGACACCAACGTGATCTCGGAACTGGTTCGCCCGAAACCTGACCCCGCCGTGCTGCACTGGTTTGC
CAACACACCGGATGATGCCCTGTTTTTGAGCGCCTTGACGCTGGGCGAAATTCGCAAGGGCGTCGAGAAACTGGCCGACA
CCCAGCGCCGTGAAGAACTTCGCCTCTGGCTGGAGCATGACCTGCGCGACTGGTTTGGCCCGCGCATCCTGCCGATTGGC
CCGGACGTGGCCGACCACTGGGGCCGGCTGCTGGCGCAGGCGGGCCGTCCCGTGCCTGCCATCGACAGCCTGCTGGCTGC
TACAGCGCTGCATCACGACTTGCGGCTGGTCACCCGCAACACCAGAGATTTTGACTACGCGGGCCTGGAGGTTATCAATC
CGTGGGAGACGGCGGCGGGCTGA

Upstream 100 bases:

>100_bases
ACCCCAAACCCAGGTTTGTCGAGTTCATGCGCCGCTCTCCAATGGCCGGGCTGGAGCTGGATACCGGGCGACATACAGGT
TTGACGCGCGAGATCGCGCT

Downstream 100 bases:

>100_bases
GCCGCAAGGCGTCCTGGGCTTCTGCCATCGCGCGGTAAAGCGCGGGCCGCAGTGTTAACAGGCCCTGGCGCGAGGTGGTG
AGGCCATGGGGCGCAAGGAA

Product: PilT protein-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MSYLIDTNVISELVRPKPDPAVLHWFANTPDDALFLSALTLGEIRKGVEKLADTQRREELRLWLEHDLRDWFGPRILPIG
PDVADHWGRLLAQAGRPVPAIDSLLAATALHHDLRLVTRNTRDFDYAGLEVINPWETAAG

Sequences:

>Translated_140_residues
MSYLIDTNVISELVRPKPDPAVLHWFANTPDDALFLSALTLGEIRKGVEKLADTQRREELRLWLEHDLRDWFGPRILPIG
PDVADHWGRLLAQAGRPVPAIDSLLAATALHHDLRLVTRNTRDFDYAGLEVINPWETAAG
>Mature_139_residues
SYLIDTNVISELVRPKPDPAVLHWFANTPDDALFLSALTLGEIRKGVEKLADTQRREELRLWLEHDLRDWFGPRILPIGP
DVADHWGRLLAQAGRPVPAIDSLLAATALHHDLRLVTRNTRDFDYAGLEVINPWETAAG

Specific function: Involved in plasmid stability (Potential) [H]

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 15794; Mature: 15663

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYLIDTNVISELVRPKPDPAVLHWFANTPDDALFLSALTLGEIRKGVEKLADTQRREEL
CCEEECHHHHHHHHCCCCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLWLEHDLRDWFGPRILPIGPDVADHWGRLLAQAGRPVPAIDSLLAATALHHDLRLVTRN
HHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
TRDFDYAGLEVINPWETAAG
CCCCCCCCCEEECCCCCCCC
>Mature Secondary Structure 
SYLIDTNVISELVRPKPDPAVLHWFANTPDDALFLSALTLGEIRKGVEKLADTQRREEL
CEEECHHHHHHHHCCCCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLWLEHDLRDWFGPRILPIGPDVADHWGRLLAQAGRPVPAIDSLLAATALHHDLRLVTRN
HHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
TRDFDYAGLEVINPWETAAG
CCCCCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]