| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91785929
Identifier: 91785929
GI number: 91785929
Start: 15672
End: 16328
Strand: Direct
Name: 91785929
Synonym: Bpro_0016
Alternate gene names: NA
Gene position: 15672-16328 (Clockwise)
Preceding gene: 91785927
Following gene: 91785934
Centisome position: 0.3
GC content: 70.47
Gene sequence:
>657_bases ATGACTCGATTTCAAAACTTCCCTGCCCAACTTCCTTCTACTCGCCCTTCCCGCCCTGCTCGCGCCGCTCGTCCGCGGAT GCTGCGGGCCATTCCGTCCATGGTGATTTTGACCACGGCCATGGCATGGGGCGCGGCCTCCTACGCTGGCGTGCCGGGCC TTGATGGCGCATCGGCTGGCCAGGGCGGCCTCATCGTTGCTGCAGGCCCCGCAGGGGTCGGCGTGGGTGCAGGTGTAGGT GCCGGTGCTGGCGGCGGTGTGAGCGTGGGCACCGTGGGGGTGGGTGCCGGTGGTGGTGCCAACACGGGTGTCACGGTTGG CGGCGGAACCGCCAATAAGGGCTTGGGGCTTGATACCGCCGCGCAGGCGGGCGCCAACCGCAACGTCACCGCCGAAGAGC GCGCGGCAGCCACGGCGGAGGCTGACGTCCGGGCGGGCGGTGCGGTCAATGCCTCGGGCGGCACAAGCCGCGCCGGTGCG GTGCTTGACGATGCCAAAGGCACCGCCCGAGCCACGGGCAGTACCGTGAGGAAAACGGGCCAGGGCATCACCCGTGGTGT GACCAGCGGCGCGCAAGGCGCAGGCAGTGTGGATGCGGCTGCGGGCGCTGGCGTGAACGCCAGCGGGGGCGTTGCCGGCG GGGCTGTCAGCCGTTAA
Upstream 100 bases:
>100_bases GTGATTGCGCATCGACTTACAAAGTCAACGAAGCCGACACCTCAAGAACAATTCCACCGGAGAAGATGAATGCTTCTTCA ATCCACAGGAGCTTCATTCA
Downstream 100 bases:
>100_bases ACCATTAAATAGTTAAACAGGGTTGATGTGAAGCGCGGCCAATGCTGCGCCCAACAACCCTTGCACCCCAGGAACACCCG CCCCCAAAGGCGGGTGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MTRFQNFPAQLPSTRPSRPARAARPRMLRAIPSMVILTTAMAWGAASYAGVPGLDGASAGQGGLIVAAGPAGVGVGAGVG AGAGGGVSVGTVGVGAGGGANTGVTVGGGTANKGLGLDTAAQAGANRNVTAEERAAATAEADVRAGGAVNASGGTSRAGA VLDDAKGTARATGSTVRKTGQGITRGVTSGAQGAGSVDAAAGAGVNASGGVAGGAVSR
Sequences:
>Translated_218_residues MTRFQNFPAQLPSTRPSRPARAARPRMLRAIPSMVILTTAMAWGAASYAGVPGLDGASAGQGGLIVAAGPAGVGVGAGVG AGAGGGVSVGTVGVGAGGGANTGVTVGGGTANKGLGLDTAAQAGANRNVTAEERAAATAEADVRAGGAVNASGGTSRAGA VLDDAKGTARATGSTVRKTGQGITRGVTSGAQGAGSVDAAAGAGVNASGGVAGGAVSR >Mature_217_residues TRFQNFPAQLPSTRPSRPARAARPRMLRAIPSMVILTTAMAWGAASYAGVPGLDGASAGQGGLIVAAGPAGVGVGAGVGA GAGGGVSVGTVGVGAGGGANTGVTVGGGTANKGLGLDTAAQAGANRNVTAEERAAATAEADVRAGGAVNASGGTSRAGAV LDDAKGTARATGSTVRKTGQGITRGVTSGAQGAGSVDAAAGAGVNASGGVAGGAVSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20034; Mature: 19903
Theoretical pI: Translated: 12.08; Mature: 12.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRFQNFPAQLPSTRPSRPARAARPRMLRAIPSMVILTTAMAWGAASYAGVPGLDGASAG CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC QGGLIVAAGPAGVGVGAGVGAGAGGGVSVGTVGVGAGGGANTGVTVGGGTANKGLGLDTA CCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEECCCCCCCCCCCCHH AQAGANRNVTAEERAAATAEADVRAGGAVNASGGTSRAGAVLDDAKGTARATGSTVRKTG HHCCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCCEEECCCCCCHHCCHHHHHHC QGITRGVTSGAQGAGSVDAAAGAGVNASGGVAGGAVSR CHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TRFQNFPAQLPSTRPSRPARAARPRMLRAIPSMVILTTAMAWGAASYAGVPGLDGASAG CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC QGGLIVAAGPAGVGVGAGVGAGAGGGVSVGTVGVGAGGGANTGVTVGGGTANKGLGLDTA CCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEECCCCCCCCCCCCHH AQAGANRNVTAEERAAATAEADVRAGGAVNASGGTSRAGAVLDDAKGTARATGSTVRKTG HHCCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCCEEECCCCCCHHCCHHHHHHC QGITRGVTSGAQGAGSVDAAAGAGVNASGGVAGGAVSR CHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA