| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yidD [C]
Identifier: 91785812
GI number: 91785812
Start: 4894652
End: 4894882
Strand: Reverse
Name: yidD [C]
Synonym: Bxe_A4465
Alternate gene names: 91785812
Gene position: 4894882-4894652 (Counterclockwise)
Preceding gene: 91785813
Following gene: 91785811
Centisome position: 99.98
GC content: 59.31
Gene sequence:
>231_bases ATGCAAACGGTACTCATCGCTTTACTGCGTTTCTACAAGGTTGCCGTGAGCCCAATGCTCGGCAACCGGTGCCGTTTTTA CCCTTCCTGCTCTGATTACGCGCGCGAAGCAATCCAGTATCATGGCGCCGCGCGCGGGACTTATCTCGCCGCCAGGCGTA TTTGCCGCTGCCACCCGTTTTCCGCGGGCGGCATCGATCTCGTCCCGCCTCCCACTTCTGAAAAGCGCTGA
Upstream 100 bases:
>100_bases AGTGACCGCCCGCTTTGCAGTTCAGGCCGCTCCGGCGGCCGTGCTGCGCGGGCCTCGCCCGGTACTCCACGTTGCGCGGC GCCGTCCGGCCGCACCAGCC
Downstream 100 bases:
>100_bases CGCGCCGTTCCATCGACACTGAGACAACGCATGGATATCAAACGCACCGTCCTATGGGTCATCTTTTTCATGTCAGCGGT CATGCTGTTCGACAACTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 76; Mature: 76
Protein sequence:
>76_residues MQTVLIALLRFYKVAVSPMLGNRCRFYPSCSDYAREAIQYHGAARGTYLAARRICRCHPFSAGGIDLVPPPTSEKR
Sequences:
>Translated_76_residues MQTVLIALLRFYKVAVSPMLGNRCRFYPSCSDYAREAIQYHGAARGTYLAARRICRCHPFSAGGIDLVPPPTSEKR >Mature_76_residues MQTVLIALLRFYKVAVSPMLGNRCRFYPSCSDYAREAIQYHGAARGTYLAARRICRCHPFSAGGIDLVPPPTSEKR
Specific function: Unknown
COG id: COG0759
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0161 family [H]
Homologues:
Organism=Escherichia coli, GI87082322, Length=73, Percent_Identity=46.5753424657534, Blast_Score=77, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002696 - ProDom: PD004225 [H]
Pfam domain/function: PF01809 DUF37 [H]
EC number: NA
Molecular weight: Translated: 8520; Mature: 8520
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTVLIALLRFYKVAVSPMLGNRCRFYPSCSDYAREAIQYHGAARGTYLAARRICRCHPF CHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC SAGGIDLVPPPTSEKR CCCCCCCCCCCCCCCC >Mature Secondary Structure MQTVLIALLRFYKVAVSPMLGNRCRFYPSCSDYAREAIQYHGAARGTYLAARRICRCHPF CHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC SAGGIDLVPPPTSEKR CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA