Click here to switch to the map view.

The map label for this gene is oxaA [H]

Identifier: 91785811

GI number: 91785811

Start: 4892963

End: 4894621

Strand: Reverse

Name: oxaA [H]

Synonym: Bxe_A4466

Alternate gene names: 91785811

Gene position: 4894621-4892963 (Counterclockwise)

Preceding gene: 91785812

Following gene: 91785808

Centisome position: 99.98

GC content: 61.3

Gene sequence:

>1659_bases
ATGGATATCAAACGCACCGTCCTATGGGTCATCTTTTTCATGTCAGCGGTCATGCTGTTCGACAACTGGCAACGCGACCA
CGGACGCCCGTCGATGTTCTTCCCGAGCGCCACGCCGACCAGGACCGTCGGTAGCGCCGCACCGGGAACCACGACGCCGG
GAACCCAGCCCGCCGATCTGCCGGCCACGAACGCAGCCGCACCGGGCAACGCGCCGGCGGCCACGCAATCGCAACTGATC
AAGTTCAACACCGACGTCTATAGCGGCGAAATCGACACTCGCGGCGGCACGCTGTCGAAGCTGTCGCTCGTCAAGCAAGG
CGACGGCAAGCAGCCCGACCTCGTCATCACGCTGTTCGACCGCACCGCGAACCACACGTACCTGGCGCGCACGGGCCTGC
TCGGCGGCGACTTCCCGAATCACAACGACATCTACACGCCGTTGCCGAACCAGCCGCACGATCTGACGGGCGACGAAAAG
TCGTTCCAGATCAGCTTCGAGTCGCCGGTGAAGGGTGGCGTGAAGGTCATCAAGACCTACACGTTCACGCGTGGCAGCTA
TGTGATCGGCGTCGACACGAAGATCCAGAACGTCGGCACCACGCCGGTGAGCCCGTCGGTCTATATGGAACTGGTACGTG
ACGATCAGCCGGTGGAAACGCCGCGCTTCTCGCACACGTTCATCGGGCCGGCTGTCTACACTGACCAGCATCACTTCCAG
AAGATGACGTTCGGCGACATCGACAAGAACAAGCAGGACTACGCGACTTCGGCCGACAACGGCTGGATTGCGATGGTCCA
GCATTACTTCGCGTCGGCCTGGATTCCGCAGCAAGGTGCGAAGCGCGATATTTACGTCGAGAAGATCGATCCGGCGCTGT
ATCGCGTCGGCGTGAAGGAGCCGGTGCCGACCATCGCGCCGGGCCAAACCGTCGACGTATCCGCGCGTCTGTTCGCGGGT
CCGGAAGAAGAGCGCATGCTCGAAGGCATCGCGCCGGGTCTGGAACTGGTGAAGGACTACGGCTGGGTGACGATCATCGC
GAAGCCGCTGTTCTGGCTGCTCGAGAAGATCCACAGCTATGTCGGCAACTGGGGCTGGTCGATCGTGCTGCTCACGCTGC
TGATCAAGGCCGTGTTCTTCCCGCTGTCCGCTGCGAGCTACAAGTCGATGGCGCGCATGAAGGCGATCACGCCGCGCATG
CAGGCGCTGCGCGAACGCTTCAAGGGCGATCCGCAGAAGATGAACTCGGCGCTGATGGAGCTGTACAAGACCGAAAAGGT
CAATCCGTTCGGCGGCTGTCTGCCGGTCGTGATCCAGATTCCGGTGTTCATTTCGCTGTACTGGGTGCTGCTGTCGTCGG
TGGAAATGCGCGGCGCGCCGTGGATCCTGTGGATTCACGATCTGTCGCAACAGGATCCGTTCTTCATCCTGCCGGTGCTG
ATGGCCGTTTCCATGTTCCTGCAGACCAAACTGAACCCGACGCCGCCGGACCCGGTTCAAGCCAAGATGATGATGTTCAT
GCCGATCGCGTTCTCGGTCATGTTCTTCTTCTTCCCGGCCGGCCTGGTGCTGTACTACGTCGTGAACAACGTGCTCTCGA
TCGCCCAGCAGTACTACATCACGCGGATGATGGGGCAGGCGAAAACCAAAGCGGCCTGA

Upstream 100 bases:

>100_bases
TTGCCGCTGCCACCCGTTTTCCGCGGGCGGCATCGATCTCGTCCCGCCTCCCACTTCTGAAAAGCGCTGACGCGCCGTTC
CATCGACACTGAGACAACGC

Downstream 100 bases:

>100_bases
TATCTGGCCTAAGGCGGGCGGCAACGCCCGCTCGCAGGCCGATGCAAGCCGACGCTGGCTCACGCAGCAGCCCAAGAAAA
TGCCGCCCGGTTTGCACCGG

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 552; Mature: 552

Protein sequence:

>552_residues
MDIKRTVLWVIFFMSAVMLFDNWQRDHGRPSMFFPSATPTRTVGSAAPGTTTPGTQPADLPATNAAAPGNAPAATQSQLI
KFNTDVYSGEIDTRGGTLSKLSLVKQGDGKQPDLVITLFDRTANHTYLARTGLLGGDFPNHNDIYTPLPNQPHDLTGDEK
SFQISFESPVKGGVKVIKTYTFTRGSYVIGVDTKIQNVGTTPVSPSVYMELVRDDQPVETPRFSHTFIGPAVYTDQHHFQ
KMTFGDIDKNKQDYATSADNGWIAMVQHYFASAWIPQQGAKRDIYVEKIDPALYRVGVKEPVPTIAPGQTVDVSARLFAG
PEEERMLEGIAPGLELVKDYGWVTIIAKPLFWLLEKIHSYVGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKAITPRM
QALRERFKGDPQKMNSALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWILWIHDLSQQDPFFILPVL
MAVSMFLQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMGQAKTKAA

Sequences:

>Translated_552_residues
MDIKRTVLWVIFFMSAVMLFDNWQRDHGRPSMFFPSATPTRTVGSAAPGTTTPGTQPADLPATNAAAPGNAPAATQSQLI
KFNTDVYSGEIDTRGGTLSKLSLVKQGDGKQPDLVITLFDRTANHTYLARTGLLGGDFPNHNDIYTPLPNQPHDLTGDEK
SFQISFESPVKGGVKVIKTYTFTRGSYVIGVDTKIQNVGTTPVSPSVYMELVRDDQPVETPRFSHTFIGPAVYTDQHHFQ
KMTFGDIDKNKQDYATSADNGWIAMVQHYFASAWIPQQGAKRDIYVEKIDPALYRVGVKEPVPTIAPGQTVDVSARLFAG
PEEERMLEGIAPGLELVKDYGWVTIIAKPLFWLLEKIHSYVGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKAITPRM
QALRERFKGDPQKMNSALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWILWIHDLSQQDPFFILPVL
MAVSMFLQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMGQAKTKAA
>Mature_552_residues
MDIKRTVLWVIFFMSAVMLFDNWQRDHGRPSMFFPSATPTRTVGSAAPGTTTPGTQPADLPATNAAAPGNAPAATQSQLI
KFNTDVYSGEIDTRGGTLSKLSLVKQGDGKQPDLVITLFDRTANHTYLARTGLLGGDFPNHNDIYTPLPNQPHDLTGDEK
SFQISFESPVKGGVKVIKTYTFTRGSYVIGVDTKIQNVGTTPVSPSVYMELVRDDQPVETPRFSHTFIGPAVYTDQHHFQ
KMTFGDIDKNKQDYATSADNGWIAMVQHYFASAWIPQQGAKRDIYVEKIDPALYRVGVKEPVPTIAPGQTVDVSARLFAG
PEEERMLEGIAPGLELVKDYGWVTIIAKPLFWLLEKIHSYVGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKAITPRM
QALRERFKGDPQKMNSALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWILWIHDLSQQDPFFILPVL
MAVSMFLQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMGQAKTKAA

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=559, Percent_Identity=37.2093023255814, Blast_Score=375, Evalue=1e-105,
Organism=Drosophila melanogaster, GI24662345, Length=194, Percent_Identity=25.2577319587629, Blast_Score=69, Evalue=9e-12,
Organism=Drosophila melanogaster, GI21356443, Length=194, Percent_Identity=25.2577319587629, Blast_Score=69, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019998
- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 61595; Mature: 61595

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKRTVLWVIFFMSAVMLFDNWQRDHGRPSMFFPSATPTRTVGSAAPGTTTPGTQPADL
CCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCC
PATNAAAPGNAPAATQSQLIKFNTDVYSGEIDTRGGTLSKLSLVKQGDGKQPDLVITLFD
CCCCCCCCCCCCCCCHHHHEEECCCEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEC
RTANHTYLARTGLLGGDFPNHNDIYTPLPNQPHDLTGDEKSFQISFESPVKGGVKVIKTY
CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEE
TFTRGSYVIGVDTKIQNVGTTPVSPSVYMELVRDDQPVETPRFSHTFIGPAVYTDQHHFQ
EEECCCEEEEECCEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEECCCEEECCCHHHH
KMTFGDIDKNKQDYATSADNGWIAMVQHYFASAWIPQQGAKRDIYVEKIDPALYRVGVKE
HCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHCCCCC
PVPTIAPGQTVDVSARLFAGPEEERMLEGIAPGLELVKDYGWVTIIAKPLFWLLEKIHSY
CCCCCCCCCEEECCCCEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
VGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKGDPQKMNSALME
HCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHH
LYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWILWIHDLSQQDPFFILPVL
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEHHHHH
MAVSMFLQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYI
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRMMGQAKTKAA
HHHHHHHHHCCC
>Mature Secondary Structure
MDIKRTVLWVIFFMSAVMLFDNWQRDHGRPSMFFPSATPTRTVGSAAPGTTTPGTQPADL
CCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCC
PATNAAAPGNAPAATQSQLIKFNTDVYSGEIDTRGGTLSKLSLVKQGDGKQPDLVITLFD
CCCCCCCCCCCCCCCHHHHEEECCCEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEC
RTANHTYLARTGLLGGDFPNHNDIYTPLPNQPHDLTGDEKSFQISFESPVKGGVKVIKTY
CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEE
TFTRGSYVIGVDTKIQNVGTTPVSPSVYMELVRDDQPVETPRFSHTFIGPAVYTDQHHFQ
EEECCCEEEEECCEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEECCCEEECCCHHHH
KMTFGDIDKNKQDYATSADNGWIAMVQHYFASAWIPQQGAKRDIYVEKIDPALYRVGVKE
HCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHCCCCC
PVPTIAPGQTVDVSARLFAGPEEERMLEGIAPGLELVKDYGWVTIIAKPLFWLLEKIHSY
CCCCCCCCCEEECCCCEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
VGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKGDPQKMNSALME
HCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHH
LYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWILWIHDLSQQDPFFILPVL
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEHHHHH
MAVSMFLQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYI
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRMMGQAKTKAA
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA