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The map label for this gene is rnpA

Identifier: 91785813

GI number: 91785813

Start: 4894989

End: 4895408

Strand: Reverse

Name: rnpA

Synonym: Bxe_A4464

Alternate gene names: 91785813

Gene position: 4895408-4894989 (Counterclockwise)

Preceding gene: 91785814

Following gene: 91785812

Centisome position: 99.99

GC content: 64.76

Gene sequence:

>420_bases
TTGCGAGCGCAAGCCGCCTTCCCCAAAGCCGCAAGGCTGCTGAAAACGGATGAATTTTCATCCGTTTTTCGTTTGCGCCC
GTGGCGCCGTACCGCGCACTTCGTGGTGTACGGCCGGCCCACCGGCAACGAAGCTCGCTTAGGCCTCGTGATCGGCAAGA
AGTACGCGCCGCGTGCGGCCACGCGTAATCTGGTGCGTCGAATCGCGCGTGAAGCCTTCCGGCTGCGTCGCGCGGAATTC
GGCGGTTGGGATGTGCTGCTGCGTTTGCACACGCGCTTCGACAAGAAAGCTTTGCCGAGCGCTTCGTCGCCGCCGTTGAG
GGCGTTGTGCCGCAGCGAAATCGAGGCGCTGCTCGACAAGGCAGCGCGCGAAGTGACCCGTCGCGAGGCGCCGCCCGCGG
AAGCGCCCAAGACGGAATGA

Upstream 100 bases:

>100_bases
CCATCTAAGGCAGGCGAGCGGATTGCGCGCACTGTGTGTGCCAAGCGAAGCCAGCGGTAACGCGGGAACGGCTGGGGCGC
AGCAACAGGGCTCGGTTCCG

Downstream 100 bases:

>100_bases
CGCTCAAGTGACCGCCCGCTTTGCAGTTCAGGCCGCTCCGGCGGCCGTGCTGCGCGGGCCTCGCCCGGTACTCCACGTTG
CGCGGCGCCGTCCGGCCGCA

Product: ribonuclease P

Products: NA

Alternate protein names: RNase P protein; RNaseP protein; Protein C5

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MRAQAAFPKAARLLKTDEFSSVFRLRPWRRTAHFVVYGRPTGNEARLGLVIGKKYAPRAATRNLVRRIAREAFRLRRAEF
GGWDVLLRLHTRFDKKALPSASSPPLRALCRSEIEALLDKAAREVTRREAPPAEAPKTE

Sequences:

>Translated_139_residues
MRAQAAFPKAARLLKTDEFSSVFRLRPWRRTAHFVVYGRPTGNEARLGLVIGKKYAPRAATRNLVRRIAREAFRLRRAEF
GGWDVLLRLHTRFDKKALPSASSPPLRALCRSEIEALLDKAAREVTRREAPPAEAPKTE
>Mature_139_residues
MRAQAAFPKAARLLKTDEFSSVFRLRPWRRTAHFVVYGRPTGNEARLGLVIGKKYAPRAATRNLVRRIAREAFRLRRAEF
GGWDVLLRLHTRFDKKALPSASSPPLRALCRSEIEALLDKAAREVTRREAPPAEAPKTE

Specific function: RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-lead

COG id: COG0594

COG function: function code J; RNase P protein component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rnpA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RNPA_BURXL (Q13SH2)

Other databases:

- EMBL:   CP000270
- RefSeq:   YP_561019.1
- ProteinModelPortal:   Q13SH2
- SMR:   Q13SH2
- GeneID:   4006468
- GenomeReviews:   CP000270_GR
- KEGG:   bxe:Bxe_A4464
- HOGENOM:   HBG728160
- OMA:   WDVLLRL
- ProtClustDB:   CLSK896452
- HAMAP:   MF_00227
- InterPro:   IPR020568
- InterPro:   IPR014721
- InterPro:   IPR000100
- InterPro:   IPR020539
- Gene3D:   G3DSA:3.30.230.10
- ProDom:   PD003629
- TIGRFAMs:   TIGR00188

Pfam domain/function: PF00825 Ribonuclease_P; SSF54211 Ribosomal_S5_D2-typ_fold

EC number: =3.1.26.5

Molecular weight: Translated: 15820; Mature: 15820

Theoretical pI: Translated: 12.00; Mature: 12.00

Prosite motif: PS00648 RIBONUCLEASE_P

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAQAAFPKAARLLKTDEFSSVFRLRPWRRTAHFVVYGRPTGNEARLGLVIGKKYAPRAA
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCHHH
TRNLVRRIAREAFRLRRAEFGGWDVLLRLHTRFDKKALPSASSPPLRALCRSEIEALLDK
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
AAREVTRREAPPAEAPKTE
HHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRAQAAFPKAARLLKTDEFSSVFRLRPWRRTAHFVVYGRPTGNEARLGLVIGKKYAPRAA
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCHHH
TRNLVRRIAREAFRLRRAEFGGWDVLLRLHTRFDKKALPSASSPPLRALCRSEIEALLDK
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
AAREVTRREAPPAEAPKTE
HHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA