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The map label for this gene is cycA [H]

Identifier: 91785433

GI number: 91785433

Start: 4494652

End: 4495305

Strand: Reverse

Name: cycA [H]

Synonym: Bxe_A0346

Alternate gene names: 91785433

Gene position: 4495305-4494652 (Counterclockwise)

Preceding gene: 91785436

Following gene: 91785432

Centisome position: 91.82

GC content: 61.77

Gene sequence:

>654_bases
ATGAATCGACTGAGCAAGACTCTGATGGTGCTTCATGTAGCGGCAGGTCTTTCAGGTTTGGCAATTCAGGCACGAGCAGC
AGATCCGGTAAAGCCGGACGTCAATCGGGGGCAGGCAATCGCGGTGCAGGTGTGCGCATCGTGTCACGGCGCAGACGGCA
ACAGCGCCGGCGGTGCGTATCCGAAACTGGCCGGCCAACACCCTGAGTATCTCGTCAAGCAGCTCAAGGATTTCAAGACC
GAGCCGGGCGCCAGGCAGCCGGCGCGCAACAATGCGATCATGGCGGGCATGGCTGCGGCGCTGTCCGATCAGGATATGGT
CAATGTCGCCGCTTATTTCGCCGCGCAGACCCCGAAGCCCGGTTACGCGCACAACAAAGACACCGTTCCGCTTGGCCAGA
AGATTTATCGCGGCGGCATTGCCGACAAGGGCGTGCCGGCCTGCGCAAGCTGCCACGGGCCGACCGGTCAGGGGATCCCG
TCGCAGTACCCGCGCCTGTCGGGGCAGTGGGCGGAATATACGGTGGCGCAGTTGACCGCGTTCACGCAAGGTCCCGGCGC
ACGTAACAATAACGAGGCGATGCATGCAATTGCCACGCGTCTGTCGGACAGTGAGATCAAGGCTGTAGCCGATTACATCG
CGGGCTTGCATTAG

Upstream 100 bases:

>100_bases
CGTCGTATTTTGCAAAACCTTCAAGAAACGCCGGGCCTGGCGCAAGTCGGCAGGTTTAGGGGCTCTCTAAAAATCCCACA
AGACGAGACAGGGTGTGCGA

Downstream 100 bases:

>100_bases
GATAGAGGGCCCCCGAACCTGGCGCTTCGCGCTGGGCTCCCCGAGGGGGAGAAAATCTGGGCGGCCCGGCTTTCTTGCGA
GTCCGCACGCAAGTGCAACC

Product: cytochrome c, class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MNRLSKTLMVLHVAAGLSGLAIQARAADPVKPDVNRGQAIAVQVCASCHGADGNSAGGAYPKLAGQHPEYLVKQLKDFKT
EPGARQPARNNAIMAGMAAALSDQDMVNVAAYFAAQTPKPGYAHNKDTVPLGQKIYRGGIADKGVPACASCHGPTGQGIP
SQYPRLSGQWAEYTVAQLTAFTQGPGARNNNEAMHAIATRLSDSEIKAVADYIAGLH

Sequences:

>Translated_217_residues
MNRLSKTLMVLHVAAGLSGLAIQARAADPVKPDVNRGQAIAVQVCASCHGADGNSAGGAYPKLAGQHPEYLVKQLKDFKT
EPGARQPARNNAIMAGMAAALSDQDMVNVAAYFAAQTPKPGYAHNKDTVPLGQKIYRGGIADKGVPACASCHGPTGQGIP
SQYPRLSGQWAEYTVAQLTAFTQGPGARNNNEAMHAIATRLSDSEIKAVADYIAGLH
>Mature_217_residues
MNRLSKTLMVLHVAAGLSGLAIQARAADPVKPDVNRGQAIAVQVCASCHGADGNSAGGAYPKLAGQHPEYLVKQLKDFKT
EPGARQPARNNAIMAGMAAALSDQDMVNVAAYFAAQTPKPGYAHNKDTVPLGQKIYRGGIADKGVPACASCHGPTGQGIP
SQYPRLSGQWAEYTVAQLTAFTQGPGARNNNEAMHAIATRLSDSEIKAVADYIAGLH

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 22646; Mature: 22646

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLSKTLMVLHVAAGLSGLAIQARAADPVKPDVNRGQAIAVQVCASCHGADGNSAGGAY
CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
PKLAGQHPEYLVKQLKDFKTEPGARQPARNNAIMAGMAAALSDQDMVNVAAYFAAQTPKP
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
GYAHNKDTVPLGQKIYRGGIADKGVPACASCHGPTGQGIPSQYPRLSGQWAEYTVAQLTA
CCCCCCCCCCHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
FTQGPGARNNNEAMHAIATRLSDSEIKAVADYIAGLH
HHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNRLSKTLMVLHVAAGLSGLAIQARAADPVKPDVNRGQAIAVQVCASCHGADGNSAGGAY
CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
PKLAGQHPEYLVKQLKDFKTEPGARQPARNNAIMAGMAAALSDQDMVNVAAYFAAQTPKP
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
GYAHNKDTVPLGQKIYRGGIADKGVPACASCHGPTGQGIPSQYPRLSGQWAEYTVAQLTA
CCCCCCCCCCHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
FTQGPGARNNNEAMHAIATRLSDSEIKAVADYIAGLH
HHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7619830; 6089759 [H]