Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is yegD [H]

Identifier: 91785350

GI number: 91785350

Start: 4411178

End: 4412428

Strand: Reverse

Name: yegD [H]

Synonym: Bxe_A0429

Alternate gene names: 91785350

Gene position: 4412428-4411178 (Counterclockwise)

Preceding gene: 91785352

Following gene: 91785348

Centisome position: 90.13

GC content: 65.55

Gene sequence:

>1251_bases
ATGAACTATTGCGCGATTGACTTCGGTACTTCCAACTCGGCCGTGGCCGTTCCTGACGGCGGCGCGCTCAGGCTCGCGCC
GGTCGAGGGCGCCTATACCACGCTGCCCACCTCGGTCTTTTTCAATACCGACGAGGACACCCGCGAATTCGGGCGGGCGG
CGCTCGCCGCGTACATTGACGGCTTCGACGGCCGCCTGATGCGTTCCATGAAGAGCATTCTCGGCTCGCCGCTCGCGGAG
AACTCCACGGATCTGGGCGACGGTTCCGCGATCAGGTACACCGACGTGATCGCGATTTTCATCGATCACCTCAAGCGCTC
GGCCGAACAAAGCGTCGGCGGCCCGATTCATCGCGCCGTGCTGGGCCGCCCGGTGTTTTTCGTCGACGACGACCCGCGTG
CCGATCAGATGGCGCAGCGGCAACTCGAAGCCGCCGCACGCTCGGTCGGTCTGCAGGAGATTCACTTTCAGTATGAGCCG
ATCGCGGCCGCGTTCGACTACGAGTCGCATCTGGCGGAAGAAGGGCTCGTGCTGGTGGCCGACATCGGCGGCGGTACCTC
GGACTTCTCGCTGGTGCGGGTCGGGCCCGAGCGGATGAAGCGCGTCGAGCGCAAGGACGACGTGCTGGCCCACCACGGCG
TGCACGTCGCCGGTACGGATTTCGACCGCCGCGTGGAACTGGCGACGATCCTGCGTGAACTCGGCTATCAGACGCTGGAC
CCGGAAGGCCGCGAGATCCCGAACCGGGTCTACTTCGATCTCGCGACCTGGCATCTGATCAACACCGTCTACTCCCCGAA
GCGGGTCAGCGAACTCGCGCTGATGCGCCATCTGTTCACGGAGGTCAAGCATCACGACCGCCTGATGCGCGTCGTGGACC
GGCGCCTCGGCCATGCGCTGGCCGCGCATGCGGAAGAGGCGAAGATCGGCGTGGCGGCGGGTGGAGAGACCGTGATCGAT
CTCGACGAAGTGGAAGACGACCTGCGCCTCGCGTTCGACGAAGCACAACTCATCAAGGCCGGCCACGACGAAACGCTGCG
CATCGTGCAGGCGGCGCGCGATACGGTGCAGGCGGCCGGGGTCGCGACACGCGACGTCGACGCCATCTATTTCACCGGCG
GCTCGACGGGTCTGGCGTTTCTATCGGGCGCATTGGCGGCGGCATTTCCCGATGCCAGGGCGGTATTCGGCGACCGTCTC
GCGAGTGTGGCGACGGGACTCGGTATTCACGCGCGGCGTGTGTTTGGATAA

Upstream 100 bases:

>100_bases
TCGCGACTGAGTTGAAAACGTCAGTTGATGCTGATCGGTCTTTCGTGTTACAAAGCCGCTCCCCTTCTGTCCGCGCCAGC
CGTGAGCGGCGATTCCTGCC

Downstream 100 bases:

>100_bases
CCGGACATTATCGGTCGCATATTGCGAAGATAATCCCTGTTCTAGTTGAAGCAGATATAAAAAAACCCCGCCGAGGCGGG
GTTTTTTTGCGTCCTGAAGG

Product: putative chaperone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MNYCAIDFGTSNSAVAVPDGGALRLAPVEGAYTTLPTSVFFNTDEDTREFGRAALAAYIDGFDGRLMRSMKSILGSPLAE
NSTDLGDGSAIRYTDVIAIFIDHLKRSAEQSVGGPIHRAVLGRPVFFVDDDPRADQMAQRQLEAAARSVGLQEIHFQYEP
IAAAFDYESHLAEEGLVLVADIGGGTSDFSLVRVGPERMKRVERKDDVLAHHGVHVAGTDFDRRVELATILRELGYQTLD
PEGREIPNRVYFDLATWHLINTVYSPKRVSELALMRHLFTEVKHHDRLMRVVDRRLGHALAAHAEEAKIGVAAGGETVID
LDEVEDDLRLAFDEAQLIKAGHDETLRIVQAARDTVQAAGVATRDVDAIYFTGGSTGLAFLSGALAAAFPDARAVFGDRL
ASVATGLGIHARRVFG

Sequences:

>Translated_416_residues
MNYCAIDFGTSNSAVAVPDGGALRLAPVEGAYTTLPTSVFFNTDEDTREFGRAALAAYIDGFDGRLMRSMKSILGSPLAE
NSTDLGDGSAIRYTDVIAIFIDHLKRSAEQSVGGPIHRAVLGRPVFFVDDDPRADQMAQRQLEAAARSVGLQEIHFQYEP
IAAAFDYESHLAEEGLVLVADIGGGTSDFSLVRVGPERMKRVERKDDVLAHHGVHVAGTDFDRRVELATILRELGYQTLD
PEGREIPNRVYFDLATWHLINTVYSPKRVSELALMRHLFTEVKHHDRLMRVVDRRLGHALAAHAEEAKIGVAAGGETVID
LDEVEDDLRLAFDEAQLIKAGHDETLRIVQAARDTVQAAGVATRDVDAIYFTGGSTGLAFLSGALAAAFPDARAVFGDRL
ASVATGLGIHARRVFG
>Mature_416_residues
MNYCAIDFGTSNSAVAVPDGGALRLAPVEGAYTTLPTSVFFNTDEDTREFGRAALAAYIDGFDGRLMRSMKSILGSPLAE
NSTDLGDGSAIRYTDVIAIFIDHLKRSAEQSVGGPIHRAVLGRPVFFVDDDPRADQMAQRQLEAAARSVGLQEIHFQYEP
IAAAFDYESHLAEEGLVLVADIGGGTSDFSLVRVGPERMKRVERKDDVLAHHGVHVAGTDFDRRVELATILRELGYQTLD
PEGREIPNRVYFDLATWHLINTVYSPKRVSELALMRHLFTEVKHHDRLMRVVDRRLGHALAAHAEEAKIGVAAGGETVID
LDEVEDDLRLAFDEAQLIKAGHDETLRIVQAARDTVQAAGVATRDVDAIYFTGGSTGLAFLSGALAAAFPDARAVFGDRL
ASVATGLGIHARRVFG

Specific function: Unknown

COG id: COG0443

COG function: function code O; Molecular chaperone

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heat shock protein 70 family [H]

Homologues:

Organism=Escherichia coli, GI87082035, Length=464, Percent_Identity=29.3103448275862, Blast_Score=163, Evalue=2e-41,
Organism=Escherichia coli, GI1786196, Length=421, Percent_Identity=24.4655581947743, Blast_Score=73, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6322505, Length=399, Percent_Identity=23.3082706766917, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018181
- InterPro:   IPR001023
- InterPro:   IPR013126 [H]

Pfam domain/function: PF00012 HSP70 [H]

EC number: NA

Molecular weight: Translated: 45195; Mature: 45195

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYCAIDFGTSNSAVAVPDGGALRLAPVEGAYTTLPTSVFFNTDEDTREFGRAALAAYID
CCEEEEEECCCCCEEECCCCCEEEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHC
GFDGRLMRSMKSILGSPLAENSTDLGDGSAIRYTDVIAIFIDHLKRSAEQSVGGPIHRAV
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LGRPVFFVDDDPRADQMAQRQLEAAARSVGLQEIHFQYEPIAAAFDYESHLAEEGLVLVA
HCCCEEEECCCCCHHHHHHHHHHHHHHHCCHHHHEEEECCHHHCCCHHHHHCCCCEEEEE
DIGGGTSDFSLVRVGPERMKRVERKDDVLAHHGVHVAGTDFDRRVELATILRELGYQTLD
ECCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHCCCCCCC
PEGREIPNRVYFDLATWHLINTVYSPKRVSELALMRHLFTEVKHHDRLMRVVDRRLGHAL
CCCCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAHAEEAKIGVAAGGETVIDLDEVEDDLRLAFDEAQLIKAGHDETLRIVQAARDTVQAAG
HHCCHHCCEEEECCCCEEEEHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
VATRDVDAIYFTGGSTGLAFLSGALAAAFPDARAVFGDRLASVATGLGIHARRVFG
CEECCCCEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHCC
>Mature Secondary Structure
MNYCAIDFGTSNSAVAVPDGGALRLAPVEGAYTTLPTSVFFNTDEDTREFGRAALAAYID
CCEEEEEECCCCCEEECCCCCEEEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHC
GFDGRLMRSMKSILGSPLAENSTDLGDGSAIRYTDVIAIFIDHLKRSAEQSVGGPIHRAV
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LGRPVFFVDDDPRADQMAQRQLEAAARSVGLQEIHFQYEPIAAAFDYESHLAEEGLVLVA
HCCCEEEECCCCCHHHHHHHHHHHHHHHCCHHHHEEEECCHHHCCCHHHHHCCCCEEEEE
DIGGGTSDFSLVRVGPERMKRVERKDDVLAHHGVHVAGTDFDRRVELATILRELGYQTLD
ECCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHCCCCCCC
PEGREIPNRVYFDLATWHLINTVYSPKRVSELALMRHLFTEVKHHDRLMRVVDRRLGHAL
CCCCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAHAEEAKIGVAAGGETVIDLDEVEDDLRLAFDEAQLIKAGHDETLRIVQAARDTVQAAG
HHCCHHCCEEEECCCCEEEEHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
VATRDVDAIYFTGGSTGLAFLSGALAAAFPDARAVFGDRLASVATGLGIHARRVFG
CEECCCCEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 6094528; 7940673; 7984428 [H]