Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is yihX [C]

Identifier: 91785338

GI number: 91785338

Start: 4399573

End: 4400196

Strand: Reverse

Name: yihX [C]

Synonym: Bxe_A0441

Alternate gene names: 91785338

Gene position: 4400196-4399573 (Counterclockwise)

Preceding gene: 91785339

Following gene: 91785330

Centisome position: 89.88

GC content: 62.98

Gene sequence:

>624_bases
ATGGCCATCAAGGCAGTGGTATTCGATTTCGGCGGCGTGCTGATCGACTGGAGCCCTGAGTATCTGTATCGGGAGCTGAT
TCCTGACGAGACCGAGCGCCGCTGGTTTCTGACGCACGTCTGTTCGATGGACTGGGTGATCCGTCAGGACGGCGGCCAGC
CGATCGTCGAAGCCACCGAGGAACTCGTCACGAAGTTTCCCGATCACGAAACGCTGATCCGCGCGTTCTACGAGCGCTGG
CACGAGATGGTGGCCGGCGTGCTCGAAGAGGGCGTGGCAATCATGGAGAAGCTCGAAGCGGCCGGCGTGCCGCTCTTCGG
GTTGACCAACTGGTCGGCGGAGACCTTTCCGTATGCGTGGGAGCATTACCCGGTGCTGCGGCGGTTTCGCGACATCGTTG
TGTCGGGGCGGGTGGGGCTGGTGAAGCCCGATCCGGCCATCTTCGCAGCCATGCGTGAGCGGATCGAAGCGCAATTGCCT
GGCATCGAGCCCGCCGAACTCGTCTTTATCGACGACAACCTGAAGAACGCCGAGGCCGCGACCGCGCTCGGCTGGCACGG
CGTGCATCACACCAGCGCCGCGCAAACCGAAGCGAAACTGCGCGAGTTGGGATTGCCGGTTTGA

Upstream 100 bases:

>100_bases
ACGCGCCTCGCGCCGCACGTCTCGGGCGAGGCCAAAGCATGGCTGGAGTTGCGCACGCAACCCATCTGATCGCAATCGGG
AATCGGCTTACGGAGCGTGC

Downstream 100 bases:

>100_bases
CGCCGCGGCGGTTCTAACGGCAAGGCGGCGCGTCAGCCGTTCCAGCGGCGCCGCGTCGCTTCGGTTTATTTAGGCGCGTT
TCGTCCCCAACCGACCGGCC

Product: putative L-2-haloalkanoic acid dehalogenase (HAD aspartate-nucleophile hydrolase)

Products: NA

Alternate protein names: HAD-Superfamily Hydrolase; HAD Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Hydrolase; Alpha Beta Hydrolase; HAD Hydrolase Family IA; 2-Haloacid Dehalogenase; Hydrolase Haloacid Dehalogenase-Like Family Protein; Haloacid Dehalogenase Superfamily Protein; Hydrolase Protein; Haloacid Dehalogenase-Like Family Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Hydrolase Protein Haloacid Dehalogenase-Like Family; Haloacid Dehalogenase-Like Hydrolase Protein; HAD Family Phosphatase; HAD Hydrolase Superfamily Protein

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MAIKAVVFDFGGVLIDWSPEYLYRELIPDETERRWFLTHVCSMDWVIRQDGGQPIVEATEELVTKFPDHETLIRAFYERW
HEMVAGVLEEGVAIMEKLEAAGVPLFGLTNWSAETFPYAWEHYPVLRRFRDIVVSGRVGLVKPDPAIFAAMRERIEAQLP
GIEPAELVFIDDNLKNAEAATALGWHGVHHTSAAQTEAKLRELGLPV

Sequences:

>Translated_207_residues
MAIKAVVFDFGGVLIDWSPEYLYRELIPDETERRWFLTHVCSMDWVIRQDGGQPIVEATEELVTKFPDHETLIRAFYERW
HEMVAGVLEEGVAIMEKLEAAGVPLFGLTNWSAETFPYAWEHYPVLRRFRDIVVSGRVGLVKPDPAIFAAMRERIEAQLP
GIEPAELVFIDDNLKNAEAATALGWHGVHHTSAAQTEAKLRELGLPV
>Mature_206_residues
AIKAVVFDFGGVLIDWSPEYLYRELIPDETERRWFLTHVCSMDWVIRQDGGQPIVEATEELVTKFPDHETLIRAFYERWH
EMVAGVLEEGVAIMEKLEAAGVPLFGLTNWSAETFPYAWEHYPVLRRFRDIVVSGRVGLVKPDPAIFAAMRERIEAQLPG
IEPAELVFIDDNLKNAEAATALGWHGVHHTSAAQTEAKLRELGLPV

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23469; Mature: 23338

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIKAVVFDFGGVLIDWSPEYLYRELIPDETERRWFLTHVCSMDWVIRQDGGQPIVEATE
CCCEEEEEECCCEEEECCHHHHHHHHCCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHH
ELVTKFPDHETLIRAFYERWHEMVAGVLEEGVAIMEKLEAAGVPLFGLTNWSAETFPYAW
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCH
EHYPVLRRFRDIVVSGRVGLVKPDPAIFAAMRERIEAQLPGIEPAELVFIDDNLKNAEAA
HHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHH
TALGWHGVHHTSAAQTEAKLRELGLPV
HHHCCCCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AIKAVVFDFGGVLIDWSPEYLYRELIPDETERRWFLTHVCSMDWVIRQDGGQPIVEATE
CCEEEEEECCCEEEECCHHHHHHHHCCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHH
ELVTKFPDHETLIRAFYERWHEMVAGVLEEGVAIMEKLEAAGVPLFGLTNWSAETFPYAW
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCH
EHYPVLRRFRDIVVSGRVGLVKPDPAIFAAMRERIEAQLPGIEPAELVFIDDNLKNAEAA
HHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHH
TALGWHGVHHTSAAQTEAKLRELGLPV
HHHCCCCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA