| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yhgN [C]
Identifier: 91785265
GI number: 91785265
Start: 4311932
End: 4312531
Strand: Reverse
Name: yhgN [C]
Synonym: Bxe_A0514
Alternate gene names: 91785265
Gene position: 4312531-4311932 (Counterclockwise)
Preceding gene: 91785266
Following gene: 91785262
Centisome position: 88.09
GC content: 63.67
Gene sequence:
>600_bases GTGGAGTACACCTTCCTGTCCGCGACCATCCTGCTGATTCTGATCACCGACCCGCTCGGCAACATTCCGCTCTTCATCAG CTGTTTGCGCGGTGTGTCGCCGAAGCGGCGCACGATCGTCATTCTCCGCGAGGTGGCAATCGCCTTCGCGATCCTGCTGG TCTTCATGGTGGCCGGCGACGGCTTTCTGCGCATGATGAGCCTGACCGATCAGTCGCTGCGCATCGGCGGCGGGATCGTG CTGTTTCTCATTGCGCTCAGGATGGTGTTTCCGCACCCGGACGGTCCATTCGGCGGCGACACGCGCGGCGGCGAACCGTT GATCGTGCCGCTCGCCATTCCGGCCCTGGCAGGACCGTCCGCGCTGGCCACCGTGATGCTGCTGACGTCGCAGGCGCCCG GCAAGATGTTCGAGTGGATCGCCGCGCTAACCGTCACCATGATCGTCTGTGCGGTCGTGCTGATGCTGGCGGAGCGCATT CAGGCGTGGCTCGGCGAGCGCGCCATGATGGCCTTCGAACGGTTGATGGGTCTCGTGCTGGTGGCAATTTCGGTGGAGAT GATGCTCGGCGGTATCCGGTCGTTCGTGCATCAACTGTGA
Upstream 100 bases:
>100_bases CCGCCGCGACGCCGAGGCGACGCTGCTGCCGGTTGAAGACGCCGCGCAAACGGTGATCGCGAAGGTTCGCGCAGCGTTGG CGCGCTAAGCGGAGCGGACG
Downstream 100 bases:
>100_bases TGCGGCAGCCGCCGGGGCGCTGAGCCCCGCAAAGTGCAGCGCAAAGAAAAGCGGCCCGTCGTGGGCCGCTTTTTCCATGT CGATTCACCGCCCGCTGGCG
Product: multiple antibiotic resistance (MarC)- related protein, putative transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MEYTFLSATILLILITDPLGNIPLFISCLRGVSPKRRTIVILREVAIAFAILLVFMVAGDGFLRMMSLTDQSLRIGGGIV LFLIALRMVFPHPDGPFGGDTRGGEPLIVPLAIPALAGPSALATVMLLTSQAPGKMFEWIAALTVTMIVCAVVLMLAERI QAWLGERAMMAFERLMGLVLVAISVEMMLGGIRSFVHQL
Sequences:
>Translated_199_residues MEYTFLSATILLILITDPLGNIPLFISCLRGVSPKRRTIVILREVAIAFAILLVFMVAGDGFLRMMSLTDQSLRIGGGIV LFLIALRMVFPHPDGPFGGDTRGGEPLIVPLAIPALAGPSALATVMLLTSQAPGKMFEWIAALTVTMIVCAVVLMLAERI QAWLGERAMMAFERLMGLVLVAISVEMMLGGIRSFVHQL >Mature_199_residues MEYTFLSATILLILITDPLGNIPLFISCLRGVSPKRRTIVILREVAIAFAILLVFMVAGDGFLRMMSLTDQSLRIGGGIV LFLIALRMVFPHPDGPFGGDTRGGEPLIVPLAIPALAGPSALATVMLLTSQAPGKMFEWIAALTVTMIVCAVVLMLAERI QAWLGERAMMAFERLMGLVLVAISVEMMLGGIRSFVHQL
Specific function: Unknown
COG id: COG2095
COG function: function code U; Multiple antibiotic transporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0056 (marC) family [H]
Homologues:
Organism=Escherichia coli, GI1789842, Length=188, Percent_Identity=47.3404255319149, Blast_Score=165, Evalue=2e-42, Organism=Escherichia coli, GI1787494, Length=194, Percent_Identity=25.7731958762887, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI1787809, Length=194, Percent_Identity=27.319587628866, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002771 [H]
Pfam domain/function: PF01914 MarC [H]
EC number: NA
Molecular weight: Translated: 21511; Mature: 21511
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 7.0 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 7.0 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYTFLSATILLILITDPLGNIPLFISCLRGVSPKRRTIVILREVAIAFAILLVFMVAGD CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC GFLRMMSLTDQSLRIGGGIVLFLIALRMVFPHPDGPFGGDTRGGEPLIVPLAIPALAGPS HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEHHHHCCHH ALATVMLLTSQAPGKMFEWIAALTVTMIVCAVVLMLAERIQAWLGERAMMAFERLMGLVL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAISVEMMLGGIRSFVHQL HHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MEYTFLSATILLILITDPLGNIPLFISCLRGVSPKRRTIVILREVAIAFAILLVFMVAGD CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC GFLRMMSLTDQSLRIGGGIVLFLIALRMVFPHPDGPFGGDTRGGEPLIVPLAIPALAGPS HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEHHHHCCHH ALATVMLLTSQAPGKMFEWIAALTVTMIVCAVVLMLAERIQAWLGERAMMAFERLMGLVL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAISVEMMLGGIRSFVHQL HHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12522265 [H]