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The map label for this gene is yybA [H]

Identifier: 91785121

GI number: 91785121

Start: 4155634

End: 4156113

Strand: Reverse

Name: yybA [H]

Synonym: Bxe_A0659

Alternate gene names: 91785121

Gene position: 4156113-4155634 (Counterclockwise)

Preceding gene: 91785123

Following gene: 91785120

Centisome position: 84.89

GC content: 64.58

Gene sequence:

>480_bases
ATGCTGAAGAACGAAGGCCTTTCGTATAATTCGCGGATGAAAACCCAACTCGATGAGCGCTTCGGCTTCCTGATTTCCGA
CGTCGGCCGTCTGACCGGCAAGCGTTTCGACGATCTCGCGAAGTCTTCGGTCGACCTGACGCGCGCGCAGTGCCGCGTGC
TGGCCTATCTCGCGCATTACGGCGACACCAATCAGGCGCGGCTCGCGGACCTGCTCGAAGTCGCGCCGATTTCGGCGGGC
CGTCTGCTCGACCGGATGGAAGAGGGCGGCTGGATCGAGCGGACCGCCAATCCGCAGGACCGCCGCGAACGCCAGGTGCA
CATGACGCCGAAGGCCGAGCGCACGCTCGGCAAGGCACGCAAGGTGGGCGACGAGGTCGCGCTCGAAGCGCTGAACGGCT
TCACCGGCGAAGAGGCGAAACAGTTGATCGCCCTGTTGCAGCGGGTGCGAGGCAATCTGAGCCGGCTGGTGGATCGGTGA

Upstream 100 bases:

>100_bases
ATGAGCGGGGGGTCGTCGATATAATAAGCATGCTTAGTATATCGGTTGCGCGAGCGCGCGGCATCGGGAATTATGCGGAG
CCTGAATTTCGCCTGTTTCA

Downstream 100 bases:

>100_bases
TGCAGGACGGTTGCGGCAGGTGCGAGCCGGCCGGCGGCCCGGCTTACGGAAATAAAATCGCCCGTAACGAAATTGCCTTG
TCGCGGTAATAAATTGAAAG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MLKNEGLSYNSRMKTQLDERFGFLISDVGRLTGKRFDDLAKSSVDLTRAQCRVLAYLAHYGDTNQARLADLLEVAPISAG
RLLDRMEEGGWIERTANPQDRRERQVHMTPKAERTLGKARKVGDEVALEALNGFTGEEAKQLIALLQRVRGNLSRLVDR

Sequences:

>Translated_159_residues
MLKNEGLSYNSRMKTQLDERFGFLISDVGRLTGKRFDDLAKSSVDLTRAQCRVLAYLAHYGDTNQARLADLLEVAPISAG
RLLDRMEEGGWIERTANPQDRRERQVHMTPKAERTLGKARKVGDEVALEALNGFTGEEAKQLIALLQRVRGNLSRLVDR
>Mature_159_residues
MLKNEGLSYNSRMKTQLDERFGFLISDVGRLTGKRFDDLAKSSVDLTRAQCRVLAYLAHYGDTNQARLADLLEVAPISAG
RLLDRMEEGGWIERTANPQDRRERQVHMTPKAERTLGKARKVGDEVALEALNGFTGEEAKQLIALLQRVRGNLSRLVDR

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 17927; Mature: 17927

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNEGLSYNSRMKTQLDERFGFLISDVGRLTGKRFDDLAKSSVDLTRAQCRVLAYLAHY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GDTNQARLADLLEVAPISAGRLLDRMEEGGWIERTANPQDRRERQVHMTPKAERTLGKAR
CCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH
KVGDEVALEALNGFTGEEAKQLIALLQRVRGNLSRLVDR
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLKNEGLSYNSRMKTQLDERFGFLISDVGRLTGKRFDDLAKSSVDLTRAQCRVLAYLAHY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GDTNQARLADLLEVAPISAGRLLDRMEEGGWIERTANPQDRRERQVHMTPKAERTLGKAR
CCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH
KVGDEVALEALNGFTGEEAKQLIALLQRVRGNLSRLVDR
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]