| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is purK [H]
Identifier: 91785086
GI number: 91785086
Start: 4117640
End: 4118836
Strand: Reverse
Name: purK [H]
Synonym: Bxe_A0694
Alternate gene names: 91785086
Gene position: 4118836-4117640 (Counterclockwise)
Preceding gene: 91785087
Following gene: 91785085
Centisome position: 84.13
GC content: 66.83
Gene sequence:
>1197_bases ATGAACCCAGACAACAACCCGGTTTCACCGATTCTGCCCGGCGCATGGCTTGGCATGGTCGGTGGCGGCCAGCTCGGCCG CATGTTCTGCTTTGCCGCTCAGGCTATGGGCTATCGCGTCGCCGTGCTCGATCCCGACGAAAACAGTCCGGCGGGCGCCG TTGCCGATCGGCATCTGCGCGCGGCGTACAACGACGAAGCGTCGCTCACCGAGCTCGCGCGGCTGTGCGCGGCGGTGTCC ACGGAGTTCGAGAACGTGCCTGCCGCGAGCCTCGACTTCCTCGCGCGGACCACCTTCGTGAGTCCGGCTGGCCGCTGCGT CGCCGTGGCGCAGGACCGCATTGCCGAGAAGCGCTTCATTGCGTCATCGGGCGTGACGGTCGCGCCGCATGTGGTGATCG AATCGTCGGATGCGCTCGCCGCGCTCGACGACGCCAAACTCGAAGCCGTGCTGCCGGGCATTCTCAAGACCGCCCGCATG GGCTACGACGGCAAAGGCCAGATTCGCGTGCGCAACGCCGAGGAAGTGCGCGAGGCGCATGCTTCGCTCGCCGGAGTGCC GTGCGTGCTGGAAAAGCGGTTGCCGCTGAAGTTCGAAGTGTCCGCGCTGATTGCGCGGGCAGCGAGCGGCGCCTCGGTGG TCTATCCGCTCGCGCAGAACACGCATCGCGACGGCGTGCTGTCGCACACCATTGTCCCGGCGCCGGACGCGAGCCCGACG CTCGTTCAGCAGGCGCAGCAGGCCGCGCTGCAAATCGCCGACAAACTCGGTTACGTGGGCGTGCTGTGCGTCGAGTTTTT CATTCTTGAAGACGGCTCGCTGGTCGCCAATGAAATGGCGCCGCGTCCGCACAACTCCGGCCATTACACGGTCGACGCCT GCGCGACCAGCCAGTTCGAGCAGCAGGTGCGCGCCATGACCGGCATGCCGTTGGGCGATACACGTCAGCATTCGCCGGCG GTGATGCTCAACATTCTCGGCGACGTGTGGTTTCCGGACGGCCCGAAGCGCCCGGCGGTCACGCCGCCCTGGCAGGAGGT CGCCGCGATGCCGGCGGCGCGTTTGCATCTGTACGGCAAGGAAGAGGCGCGTTGCGGCCGCAAGATGGGCCACGTGAACT TCACGGCGGCTACGCTCGAAGAAGCCCGCACCGCTGCGCGCGATTGCGCACGGCTTCTGCACATCATCACGAGCTGA
Upstream 100 bases:
>100_bases AAGCGCACAGACTGATTGCTTCAAGACGTCCCCCTGTCCGACCCCCGGCCGGGTGCCTGCCATCGCATTGCATGCACACC GGCCGCGACCGACCACTAAG
Downstream 100 bases:
>100_bases CACGAGAGCCATGCCGGATCAACAGAAAGCCGCCGAAGGCGCATTGCCTGTGAGCGCCGCGCAGATCGAACACGCGGCGG CGCTGCTGGACGCGGGAGAG
Product: phosphoribosylaminoimidazole carboxylase ATPase subunit
Products: NA
Alternate protein names: N5-CAIR synthase; 5-(carboxyamino)imidazole ribonucleotide synthetase [H]
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MNPDNNPVSPILPGAWLGMVGGGQLGRMFCFAAQAMGYRVAVLDPDENSPAGAVADRHLRAAYNDEASLTELARLCAAVS TEFENVPAASLDFLARTTFVSPAGRCVAVAQDRIAEKRFIASSGVTVAPHVVIESSDALAALDDAKLEAVLPGILKTARM GYDGKGQIRVRNAEEVREAHASLAGVPCVLEKRLPLKFEVSALIARAASGASVVYPLAQNTHRDGVLSHTIVPAPDASPT LVQQAQQAALQIADKLGYVGVLCVEFFILEDGSLVANEMAPRPHNSGHYTVDACATSQFEQQVRAMTGMPLGDTRQHSPA VMLNILGDVWFPDGPKRPAVTPPWQEVAAMPAARLHLYGKEEARCGRKMGHVNFTAATLEEARTAARDCARLLHIITS
Sequences:
>Translated_398_residues MNPDNNPVSPILPGAWLGMVGGGQLGRMFCFAAQAMGYRVAVLDPDENSPAGAVADRHLRAAYNDEASLTELARLCAAVS TEFENVPAASLDFLARTTFVSPAGRCVAVAQDRIAEKRFIASSGVTVAPHVVIESSDALAALDDAKLEAVLPGILKTARM GYDGKGQIRVRNAEEVREAHASLAGVPCVLEKRLPLKFEVSALIARAASGASVVYPLAQNTHRDGVLSHTIVPAPDASPT LVQQAQQAALQIADKLGYVGVLCVEFFILEDGSLVANEMAPRPHNSGHYTVDACATSQFEQQVRAMTGMPLGDTRQHSPA VMLNILGDVWFPDGPKRPAVTPPWQEVAAMPAARLHLYGKEEARCGRKMGHVNFTAATLEEARTAARDCARLLHIITS >Mature_398_residues MNPDNNPVSPILPGAWLGMVGGGQLGRMFCFAAQAMGYRVAVLDPDENSPAGAVADRHLRAAYNDEASLTELARLCAAVS TEFENVPAASLDFLARTTFVSPAGRCVAVAQDRIAEKRFIASSGVTVAPHVVIESSDALAALDDAKLEAVLPGILKTARM GYDGKGQIRVRNAEEVREAHASLAGVPCVLEKRLPLKFEVSALIARAASGASVVYPLAQNTHRDGVLSHTIVPAPDASPT LVQQAQQAALQIADKLGYVGVLCVEFFILEDGSLVANEMAPRPHNSGHYTVDACATSQFEQQVRAMTGMPLGDTRQHSPA VMLNILGDVWFPDGPKRPAVTPPWQEVAAMPAARLHLYGKEEARCGRKMGHVNFTAATLEEARTAARDCARLLHIITS
Specific function: Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) [H]
COG id: COG0026
COG function: function code F; Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
Organism=Escherichia coli, GI1786733, Length=357, Percent_Identity=33.6134453781513, Blast_Score=151, Evalue=8e-38, Organism=Escherichia coli, GI1788155, Length=383, Percent_Identity=26.3707571801567, Blast_Score=98, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6324702, Length=392, Percent_Identity=32.1428571428571, Blast_Score=206, Evalue=6e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006115 - InterPro: IPR005875 - InterPro: IPR011761 - InterPro: IPR003135 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 [H]
Pfam domain/function: PF02222 ATP-grasp; PF03446 NAD_binding_2 [H]
EC number: =6.3.4.18 [H]
Molecular weight: Translated: 42401; Mature: 42401
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPDNNPVSPILPGAWLGMVGGGQLGRMFCFAAQAMGYRVAVLDPDENSPAGAVADRHLR CCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHH AAYNDEASLTELARLCAAVSTEFENVPAASLDFLARTTFVSPAGRCVAVAQDRIAEKRFI HHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHH ASSGVTVAPHVVIESSDALAALDDAKLEAVLPGILKTARMGYDGKGQIRVRNAEEVREAH HCCCCEEECEEEEECCCCEEHHCHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHH ASLAGVPCVLEKRLPLKFEVSALIARAASGASVVYPLAQNTHRDGVLSHTIVPAPDASPT HHHCCCCHHECCCCCCEEHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEECCCCCCHH LVQQAQQAALQIADKLGYVGVLCVEFFILEDGSLVANEMAPRPHNSGHYTVDACATSQFE HHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEHHHCCCCCCCCCCEEEEHHHHHHHH QQVRAMTGMPLGDTRQHSPAVMLNILGDVWFPDGPKRPAVTPPWQEVAAMPAARLHLYGK HHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCHHHEEECCC EEARCGRKMGHVNFTAATLEEARTAARDCARLLHIITS HHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNPDNNPVSPILPGAWLGMVGGGQLGRMFCFAAQAMGYRVAVLDPDENSPAGAVADRHLR CCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHH AAYNDEASLTELARLCAAVSTEFENVPAASLDFLARTTFVSPAGRCVAVAQDRIAEKRFI HHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHH ASSGVTVAPHVVIESSDALAALDDAKLEAVLPGILKTARMGYDGKGQIRVRNAEEVREAH HCCCCEEECEEEEECCCCEEHHCHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHH ASLAGVPCVLEKRLPLKFEVSALIARAASGASVVYPLAQNTHRDGVLSHTIVPAPDASPT HHHCCCCHHECCCCCCEEHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEECCCCCCHH LVQQAQQAALQIADKLGYVGVLCVEFFILEDGSLVANEMAPRPHNSGHYTVDACATSQFE HHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEHHHCCCCCCCCCCEEEEHHHHHHHH QQVRAMTGMPLGDTRQHSPAVMLNILGDVWFPDGPKRPAVTPPWQEVAAMPAARLHLYGK HHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCHHHEEECCC EEARCGRKMGHVNFTAATLEEARTAARDCARLLHIITS HHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3036807; 9384377 [H]