Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is gsiD [H]

Identifier: 91784942

GI number: 91784942

Start: 3952426

End: 3953331

Strand: Reverse

Name: gsiD [H]

Synonym: Bxe_A0838

Alternate gene names: 91784942

Gene position: 3953331-3952426 (Counterclockwise)

Preceding gene: 91784943

Following gene: 91784941

Centisome position: 80.75

GC content: 63.36

Gene sequence:

>906_bases
ATGAGCACGACCGCCACCGAGCCGAATGCGGCCAGCACCGTGAAAGCCGAATCCGCGATCCGCACACCGTGGAGCGAGTT
CTGGCGCAAATTCCGCAAGCAGCATGTGGCGCTTGCCGCCGGCATTTTCGTGCTGCTGCTGATCGCGCTTGCAATTGCGG
CACCGCATATCGTGCCGTACGACCCGGAGAATTTCTTCGACTACGACGCGTTGAACGCGGGGCCGTCCGCCGCGCACTGG
TTCGGCGTGGACTCGCTGGGCCGCGATATTTTCAGCCGTATTCTGGCGGGCTCGCGTATTTCGCTCGAAGCGGGCTTTCT
GTCCGTTGCGATCGGCGCGGTGATCGGCACGTTCTTCGGCTTGCTGGCCGGCTATTACGAAGGCTGGTGGGATCGCATCA
CGATGCGCGTCGCCGACGTGCTGTTCGCCTTTCCCGGCATTCTGCTGGCCATCGGCGTGGTGGCGATTCTCGGCAACGGC
ATGATCAACGTGATCTGCGCGGTGGCGATCTTCAGCATTCCGGCGTTCGCGCGGCTCGTGCGCGGCAATACGCTGATGCT
CAAGCAGCTCACGTATATCGAAGCGGCACGCAGCATCGGCGCGTCGGATTGGACCATCATCGTGCGGCACATTCTGCCGG
GAGCGATCTCTTCGGTGGTGGTGTACTTCACGATGCGTATCGGTACGTCGATCATCACGGCGGCAAGCCTGTCGTTTCTC
GGCCTCGGCGCGCAGCCGCCGACGCCCGAGTGGGGCGCGATGCTCAACGAAGCGCGCGCCGACATGGTGACTGCGCCGCA
TATCGCGCTGTTTCCGAGTCTGGCGATTTTCCTGACGGTGCTGGCGTTCAACCTGCTCGGCGACGGTTTGCGCGATGCGC
TCGATCCGAAGCTCGACCGGCCATGA

Upstream 100 bases:

>100_bases
GAAGTGCTGCTGTTCTCGCTGGAATTCATCATCATCAACCTGGTCGTGGACGTGCTGTACGCCGTGATCAACCCGACCAT
CCGTTTCAAGTGAGGCCCGC

Downstream 100 bases:

>100_bases
ATTCGCCAGAGATGCGCCGCGCGCCGCATATCGGCACATTGCCGGCAGGTCCGCGCGGCACGATTGCCGATGTACACGGC
GTGACAGTCGGACATTGCAC

Product: ABC peptide transporter, inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MSTTATEPNAASTVKAESAIRTPWSEFWRKFRKQHVALAAGIFVLLLIALAIAAPHIVPYDPENFFDYDALNAGPSAAHW
FGVDSLGRDIFSRILAGSRISLEAGFLSVAIGAVIGTFFGLLAGYYEGWWDRITMRVADVLFAFPGILLAIGVVAILGNG
MINVICAVAIFSIPAFARLVRGNTLMLKQLTYIEAARSIGASDWTIIVRHILPGAISSVVVYFTMRIGTSIITAASLSFL
GLGAQPPTPEWGAMLNEARADMVTAPHIALFPSLAIFLTVLAFNLLGDGLRDALDPKLDRP

Sequences:

>Translated_301_residues
MSTTATEPNAASTVKAESAIRTPWSEFWRKFRKQHVALAAGIFVLLLIALAIAAPHIVPYDPENFFDYDALNAGPSAAHW
FGVDSLGRDIFSRILAGSRISLEAGFLSVAIGAVIGTFFGLLAGYYEGWWDRITMRVADVLFAFPGILLAIGVVAILGNG
MINVICAVAIFSIPAFARLVRGNTLMLKQLTYIEAARSIGASDWTIIVRHILPGAISSVVVYFTMRIGTSIITAASLSFL
GLGAQPPTPEWGAMLNEARADMVTAPHIALFPSLAIFLTVLAFNLLGDGLRDALDPKLDRP
>Mature_300_residues
STTATEPNAASTVKAESAIRTPWSEFWRKFRKQHVALAAGIFVLLLIALAIAAPHIVPYDPENFFDYDALNAGPSAAHWF
GVDSLGRDIFSRILAGSRISLEAGFLSVAIGAVIGTFFGLLAGYYEGWWDRITMRVADVLFAFPGILLAIGVVAILGNGM
INVICAVAIFSIPAFARLVRGNTLMLKQLTYIEAARSIGASDWTIIVRHILPGAISSVVVYFTMRIGTSIITAASLSFLG
LGAQPPTPEWGAMLNEARADMVTAPHIALFPSLAIFLTVLAFNLLGDGLRDALDPKLDRP

Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=291, Percent_Identity=75.9450171821306, Blast_Score=453, Evalue=1e-129,
Organism=Escherichia coli, GI1787760, Length=286, Percent_Identity=39.5104895104895, Blast_Score=219, Evalue=1e-58,
Organism=Escherichia coli, GI1789964, Length=285, Percent_Identity=41.7543859649123, Blast_Score=182, Evalue=3e-47,
Organism=Escherichia coli, GI1789889, Length=241, Percent_Identity=41.9087136929461, Blast_Score=181, Evalue=6e-47,
Organism=Escherichia coli, GI1787498, Length=302, Percent_Identity=36.4238410596026, Blast_Score=175, Evalue=4e-45,
Organism=Escherichia coli, GI1787549, Length=272, Percent_Identity=33.0882352941176, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1788505, Length=236, Percent_Identity=32.2033898305085, Blast_Score=119, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32334; Mature: 32203

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTATEPNAASTVKAESAIRTPWSEFWRKFRKQHVALAAGIFVLLLIALAIAAPHIVPY
CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DPENFFDYDALNAGPSAAHWFGVDSLGRDIFSRILAGSRISLEAGFLSVAIGAVIGTFFG
CCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
LLAGYYEGWWDRITMRVADVLFAFPGILLAIGVVAILGNGMINVICAVAIFSIPAFARLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
RGNTLMLKQLTYIEAARSIGASDWTIIVRHILPGAISSVVVYFTMRIGTSIITAASLSFL
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLGAQPPTPEWGAMLNEARADMVTAPHIALFPSLAIFLTVLAFNLLGDGLRDALDPKLDR
CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
P
C
>Mature Secondary Structure 
STTATEPNAASTVKAESAIRTPWSEFWRKFRKQHVALAAGIFVLLLIALAIAAPHIVPY
CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DPENFFDYDALNAGPSAAHWFGVDSLGRDIFSRILAGSRISLEAGFLSVAIGAVIGTFFG
CCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
LLAGYYEGWWDRITMRVADVLFAFPGILLAIGVVAILGNGMINVICAVAIFSIPAFARLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
RGNTLMLKQLTYIEAARSIGASDWTIIVRHILPGAISSVVVYFTMRIGTSIITAASLSFL
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLGAQPPTPEWGAMLNEARADMVTAPHIALFPSLAIFLTVLAFNLLGDGLRDALDPKLDR
CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
P
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA