| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91784941
Identifier: 91784941
GI number: 91784941
Start: 3951335
End: 3952429
Strand: Reverse
Name: 91784941
Synonym: Bxe_A0839
Alternate gene names: NA
Gene position: 3952429-3951335 (Counterclockwise)
Preceding gene: 91784942
Following gene: 91784940
Centisome position: 80.73
GC content: 66.85
Gene sequence:
>1095_bases ATGAATTCGCCAGAGATGCGCCGCGCGCCGCATATCGGCACATTGCCGGCAGGTCCGCGCGGCACGATTGCCGATGTACA CGGCGTGACAGTCGGACATTGCACGCTCGATGAAGGCGCCGTGCAAACCGGCGTGACCGTGATTCGTCCGCATGACGGCG ACCCGTTTCTCGACAAGGTGCCGGCGGCGGCGTCGGTGATCAATGGATTCGGGAAGAGCATCGGGCTCGTGCAGGTCGAA GAACTCGGCACGCTGGAAACGCCGATCGCGTTGACCAATACATTCAGCGTCGCCGCCGCCGCGCAGGCGCAGATTCGGGC GGCGGTGCGCGCCAATCCGCAGATCGGACGCGAGTGGCCGACGGTCAATCCTTTGGTGTTCGAATGCAATGACGGCTATC TGAACGATATCCAGGCACTGGCCGTCACCGCGCGGCATTTCGACGACGCTTATGCCGCAGCCGGCCCGGATGTCGCTGGC GGATCGGTCGGCGCGGGCCGGGGCATGTCGTGCTTCGATCTGAAGGGCGGCATAGGCAATGCATCGCGCGTGGTGAGCGC TGCTGGCCGCAGCTATACGGTTGGCGCACTCGTGCTGGCGAACTTTGGCCGCCTGCCGATGCTAACCATCGACGGTATGC CGCTCGGCCGCGCGCTGGCCGAACGCGCGGACAACGCGGAAGCGGCGGCATTGCTGTCAGCCACGCCGGCGACACAACCC GAGCAAGGCTCGATCATCATGATCGTCGCCACCGACGCGCCGCTCGACGCGCGCCAGCTCAGGCGACTCTCATTGCGCGC GGCAGCAGGCCTCGCGCGCACCGGTTCGGTATATGGCCACGGTAGCGGCGATATCGCGCTGGCGTTTTCGACGGCTTATA CCGTGCCGCACGGGGCCGACTTCGTCACGCTGCCGCCGCTCGTCGCCGACGAGCGCCTCGACCCGCTCTTTCGCGCCTGC GCGGACAGCGTCGAACAGGCGATTCTCGACGCCTTGTGGCGTGCTGCGTCCGTGACCGGGCGCGCCGGCCGCCGGCGTCT GTCGCTGCATGACAGCGTCCCCGATCTCGCCCAACTACTCAAGCCCACTCCCTGA
Upstream 100 bases:
>100_bases TCGCGCTGTTTCCGAGTCTGGCGATTTTCCTGACGGTGCTGGCGTTCAACCTGCTCGGCGACGGTTTGCGCGATGCGCTC GATCCGAAGCTCGACCGGCC
Downstream 100 bases:
>100_bases TGAAAGTCCTCATTTCCGCCGACATAGAAGGCATTGCCGGCGTGTTTCATCCCGAGCAAACGCGCGCGGGCAATAGCGAA TACGAAGCGGCGCGCCGCTG
Product: aminopeptidase DmpA
Products: NA
Alternate protein names: D-Aminopeptidase; Aminopeptidase DmpA; L-Aminopeptidase/D-Esterase; Aminopeptidase; Peptidase S; T4 Family Peptidase; Peptidase T4 Family; Family; S58 Family Peptidase; L-Aminopeptidase DmpA; D-Amino Peptidase Dmpa Family; Serine Peptidase; L-Aminopeptidase Dmpa; Aminopeptidase DpmA; D-Alanine-D-Alanine Ligase / Aminopeptidase; Peptidase Family; Aminopeptidase-Like Protein; D-Aminopeptidease; D-AMINO PEPTIDASE DmpA Family; L-Aminopeptidase D-Ala-Esterase/Amidase
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MNSPEMRRAPHIGTLPAGPRGTIADVHGVTVGHCTLDEGAVQTGVTVIRPHDGDPFLDKVPAAASVINGFGKSIGLVQVE ELGTLETPIALTNTFSVAAAAQAQIRAAVRANPQIGREWPTVNPLVFECNDGYLNDIQALAVTARHFDDAYAAAGPDVAG GSVGAGRGMSCFDLKGGIGNASRVVSAAGRSYTVGALVLANFGRLPMLTIDGMPLGRALAERADNAEAAALLSATPATQP EQGSIIMIVATDAPLDARQLRRLSLRAAAGLARTGSVYGHGSGDIALAFSTAYTVPHGADFVTLPPLVADERLDPLFRAC ADSVEQAILDALWRAASVTGRAGRRRLSLHDSVPDLAQLLKPTP
Sequences:
>Translated_364_residues MNSPEMRRAPHIGTLPAGPRGTIADVHGVTVGHCTLDEGAVQTGVTVIRPHDGDPFLDKVPAAASVINGFGKSIGLVQVE ELGTLETPIALTNTFSVAAAAQAQIRAAVRANPQIGREWPTVNPLVFECNDGYLNDIQALAVTARHFDDAYAAAGPDVAG GSVGAGRGMSCFDLKGGIGNASRVVSAAGRSYTVGALVLANFGRLPMLTIDGMPLGRALAERADNAEAAALLSATPATQP EQGSIIMIVATDAPLDARQLRRLSLRAAAGLARTGSVYGHGSGDIALAFSTAYTVPHGADFVTLPPLVADERLDPLFRAC ADSVEQAILDALWRAASVTGRAGRRRLSLHDSVPDLAQLLKPTP >Mature_364_residues MNSPEMRRAPHIGTLPAGPRGTIADVHGVTVGHCTLDEGAVQTGVTVIRPHDGDPFLDKVPAAASVINGFGKSIGLVQVE ELGTLETPIALTNTFSVAAAAQAQIRAAVRANPQIGREWPTVNPLVFECNDGYLNDIQALAVTARHFDDAYAAAGPDVAG GSVGAGRGMSCFDLKGGIGNASRVVSAAGRSYTVGALVLANFGRLPMLTIDGMPLGRALAERADNAEAAALLSATPATQP EQGSIIMIVATDAPLDARQLRRLSLRAAAGLARTGSVYGHGSGDIALAFSTAYTVPHGADFVTLPPLVADERLDPLFRAC ADSVEQAILDALWRAASVTGRAGRRRLSLHDSVPDLAQLLKPTP
Specific function: Unknown
COG id: COG3191
COG function: function code EQ; L-aminopeptidase/D-esterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37670; Mature: 37670
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSPEMRRAPHIGTLPAGPRGTIADVHGVTVGHCTLDEGAVQTGVTVIRPHDGDPFLDKV CCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEEECCCCHHHCCEEEEECCCCCCHHHHH PAAASVINGFGKSIGLVQVEELGTLETPIALTNTFSVAAAAQAQIRAAVRANPQIGREWP HHHHHHHHHHCCCCCEEEHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCC TVNPLVFECNDGYLNDIQALAVTARHFDDAYAAAGPDVAGGSVGAGRGMSCFDLKGGIGN CCCCEEEEECCCCHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCC ASRVVSAAGRSYTVGALVLANFGRLPMLTIDGMPLGRALAERADNAEAAALLSATPATQP HHHHHHHCCCCEEHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCCCHHHHEEECCCCCCC EQGSIIMIVATDAPLDARQLRRLSLRAAAGLARTGSVYGHGSGDIALAFSTAYTVPHGAD CCCCEEEEEECCCCCCHHHHHHHHHHHHHCHHHCCCEEECCCCCEEEEEEEEECCCCCCC FVTLPPLVADERLDPLFRACADSVEQAILDALWRAASVTGRAGRRRLSLHDSVPDLAQLL EEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHH KPTP CCCC >Mature Secondary Structure MNSPEMRRAPHIGTLPAGPRGTIADVHGVTVGHCTLDEGAVQTGVTVIRPHDGDPFLDKV CCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEEECCCCHHHCCEEEEECCCCCCHHHHH PAAASVINGFGKSIGLVQVEELGTLETPIALTNTFSVAAAAQAQIRAAVRANPQIGREWP HHHHHHHHHHCCCCCEEEHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCC TVNPLVFECNDGYLNDIQALAVTARHFDDAYAAAGPDVAGGSVGAGRGMSCFDLKGGIGN CCCCEEEEECCCCHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCC ASRVVSAAGRSYTVGALVLANFGRLPMLTIDGMPLGRALAERADNAEAAALLSATPATQP HHHHHHHCCCCEEHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCCCHHHHEEECCCCCCC EQGSIIMIVATDAPLDARQLRRLSLRAAAGLARTGSVYGHGSGDIALAFSTAYTVPHGAD CCCCEEEEEECCCCCCHHHHHHHHHHHHHCHHHCCCEEECCCCCEEEEEEEEECCCCCCC FVTLPPLVADERLDPLFRACADSVEQAILDALWRAASVTGRAGRRRLSLHDSVPDLAQLL EEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHH KPTP CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA